Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
346171
Gene name Gene Name - the full gene name approved by the HGNC.
ZFP57 zinc finger protein
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ZFP57
Synonyms (NCBI Gene) Gene synonyms aliases
C6orf40, TNDM1, ZNF698, bA145L22, bA145L22.2
Disease Acronyms (UniProt) Disease acronyms from UniProt database
TNDM1
Chromosome Chromosome number
6
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
6p22.1
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a zinc finger protein containing a KRAB domain. Studies in mouse suggest that this protein may function as a transcriptional repressor. Mutations in this gene have been associated with transient neonatal diabetes mellit
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs61730328 G>A,T Benign, pathogenic Stop gained, coding sequence variant, synonymous variant
rs77625743 C>T Pathogenic Coding sequence variant, missense variant
rs78378398 G>A,T Pathogenic Coding sequence variant, missense variant
rs606231121 TCTC>-,TC Pathogenic Frameshift variant, coding sequence variant
rs606231123 GTGCCTGG>- Pathogenic Stop gained, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT016959 hsa-miR-335-5p Microarray 18185580
MIRT016959 hsa-miR-335-5p Microarray 18185580
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IBA 21873635
GO:0000977 Function RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA 21873635
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA 21873635
GO:0001227 Function DNA-binding transcription repressor activity, RNA polymerase II-specific IBA 21873635
GO:0003682 Function Chromatin binding IDA 30602440
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
612192 18791 ENSG00000204644
Protein
UniProt ID Q9NU63
Protein name Zinc finger protein 57 homolog (Zfp-57) (Zinc finger protein 698)
Protein function Transcription regulator required to maintain maternal and paternal gene imprinting, a process by which gene expression is restricted in a parent of origin-specific manner by epigenetic modification of genomic DNA and chromatin, including DNA met
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01352 KRAB 15 55 KRAB box Family
PF00096 zf-C2H2 91 113 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 147 169 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 175 197 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 329 350 Zinc finger, C2H2 type Domain
Sequence
MAAGEPRSLLFFQKPVTFEDVAVNFTQEEWDCLDASQRVLYQDVMSETFKNLTSVARIFL
HKPELITKLEQEEEQWRETRVLQASQAGPPFFCYTCGKCFSRRSYLYSHQFVHNPKLTNS
CSQCGKLFRSPKSLSYHRRMHLGERPFCCTLCDKTYCDASGLSRHRRVHLGYRPHSCSVC
GKSFRDQSELKRHQKIH
QNQEPVDGNQECTLRIPGTQAEFQTPIARSQRSIQGLLDVNHA
PVARSQEPIFRTEGPMAQNQASVLKNQAPVTRTQAPITGTLCQDARSNSHPVKPSRLNVF
CCPHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHWKQKSYLCPI
CDLSFGEKEGLMDHWRGYKGKDLCQSSHHKCRVILGQWLGFSHDVPTMAGEEWKHGGDQS
PPRIHTPRRRGLREKACKGDKTKEAVSILKHK
Sequence length 452
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Apraxia Apraxias rs121908377, rs121908378, rs1135401820, rs1178491246, rs1584969672
Arthrogryposis multiplex congenita Arthrogryposis rs1586285494, rs80358233, rs137853305, rs1559154278, rs398124167, rs398124172, rs587780399, rs786204576, rs786204430, rs769345284, rs749355583, rs793888524, rs793888525, rs878854368, rs555445835
View all (138 more)
Congenital heart defects Congenital Heart Defects rs267607101, rs121434422, rs387906498, rs397509416, rs587777371, rs587777372, rs587777374, rs367537998, rs797044882, rs886041730, rs768027510, rs1064793873, rs1555447012, rs1554263268, rs1554263321
View all (13 more)
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Unknown
Disease term Disease name Evidence References Source
Schizophrenia Schizophrenia GWAS
Nasopharyngeal Carcinoma Nasopharyngeal Carcinoma These data suggest that KAT7 can contribute NPC cell growth and survival through up-regulation of NPC-essential genes. GWAS, CBGDA
Mental Depression Mental Depression GWAS
Breast Cancer Breast Cancer Importantly, breast cancer patients bearing PRC2 LOF mutations displayed significantly worse prognosis compared with PRC2 wild-type patients GWAS, CBGDA
Associations from Text Mining
Disease Name Relationship Type References
6q24 Related Transient Neonatal Diabetes Mellitus Associate 21863059, 27075368
Alzheimer Disease Associate 37833700
Anodontia Associate 35175239
Birk Barel Mental Retardation Dysmorphism Syndrome Associate 33053156
Cerebellar Ataxia Deafness and Narcolepsy Associate 37584462
Colorectal Neoplasms Associate 35175239
Developmental Disabilities Associate 23150280
Diabetes Mellitus Associate 23748067, 27322064, 28667717
Diabetes Mellitus Transient Neonatal 1 Associate 23150280, 23748067, 27075368
Distal Myopathies Associate 38015635