Gene Gene information from NCBI Gene database.
Entrez ID 346007
Gene name Eyes shut homolog
Gene symbol EYS
Synonyms (NCBI Gene)
C6orf178C6orf179C6orf180EGFL10EGFL11RP25SPAMbA166P24.2bA307F22.3bA74E24.1dJ1018A4.2dJ22I17.2dJ303F19.1
Chromosome 6
Chromosome location 6q12
Summary The product of this gene contains multiple epidermal growth factor (EGF)-like and LamG domains. The protein is expressed in the photoreceptor layer of the retina, and the gene is mutated in autosomal recessive retinitis pigmentosa. Multiple transcript var
SNPs SNP information provided by dbSNP.
124
SNP ID Visualize variation Clinical significance Consequence
rs12663916 G>A,T Pathogenic, benign, likely-benign Missense variant, synonymous variant, genic downstream transcript variant, coding sequence variant
rs112822256 C>T Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs137853189 C>A Pathogenic Genic downstream transcript variant, stop gained, coding sequence variant
rs142450703 C>T Likely-pathogenic, uncertain-significance Genic downstream transcript variant, missense variant, coding sequence variant
rs143327210 G>C Benign, conflicting-interpretations-of-pathogenicity Genic downstream transcript variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
73
miRTarBase ID miRNA Experiments Reference
MIRT023100 hsa-miR-124-3p Microarray 18668037
MIRT527609 hsa-miR-494-3p PAR-CLIP 22012620
MIRT527608 hsa-miR-4680-5p PAR-CLIP 22012620
MIRT527607 hsa-miR-376a-5p PAR-CLIP 22012620
MIRT527606 hsa-miR-510-3p PAR-CLIP 22012620
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
15
GO ID Ontology Definition Evidence Reference
GO:0001750 Component Photoreceptor outer segment IEA
GO:0005509 Function Calcium ion binding IEA
GO:0005576 Component Extracellular region IEA
GO:0005737 Component Cytoplasm IEA
GO:0005813 Component Centrosome IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612424 21555 ENSG00000188107
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q5T1H1
Protein name Protein eyes shut homolog (Epidermal growth factor-like protein 10) (EGF-like protein 10) (Epidermal growth factor-like protein 11) (EGF-like protein 11) (Protein spacemaker homolog)
Protein function Required to maintain the integrity of photoreceptor cells (PubMed:18836446). Specifically required for normal morphology of the photoreceptor ciliary pocket, and might thus facilitate protein trafficking between the photoreceptor inner and outer
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00008 EGF 176 210 EGF-like domain Domain
PF00008 EGF 685 712 EGF-like domain Domain
PF12661 hEGF 742 763 Human growth factor-like EGF Domain
PF00008 EGF 775 805 EGF-like domain Domain
PF12661 hEGF 899 920 Human growth factor-like EGF Domain
PF00008 EGF 932 962 EGF-like domain Domain
PF00008 EGF 1008 1038 EGF-like domain Domain
PF12661 hEGF 1088 1109 Human growth factor-like EGF Domain
PF00008 EGF 1121 1157 EGF-like domain Domain
PF12661 hEGF 1170 1191 Human growth factor-like EGF Domain
PF02210 Laminin_G_2 1911 2045 Laminin G domain Domain
PF00008 EGF 2103 2138 EGF-like domain Domain
PF02210 Laminin_G_2 2179 2317 Laminin G domain Domain
PF02210 Laminin_G_2 2455 2585 Laminin G domain Domain
PF00008 EGF 2614 2644 EGF-like domain Domain
PF00008 EGF 2652 2687 EGF-like domain Domain
PF02210 Laminin_G_2 2745 2877 Laminin G domain Domain
PF12661 hEGF 2905 2926 Human growth factor-like EGF Domain
PF02210 Laminin_G_2 3007 3141 Laminin G domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in retina (at protein level) (PubMed:18836446, PubMed:18976725, PubMed:27737822, PubMed:27846257). Isoform 1: Detected in retina (PubMed:27846257). Isoform 2: Detected in retina (PubMed:27846257). Isoform 3: Strongly expresse
Sequence
MTDKSIVILSLMVFHSSFINGKTCRRQLVEEWHPQPSSYVVNWTLTENICLDFYRDCWFL
GVNTKIDTSGNQAVPQICPLQIQLGDILVISSEPSLQFPEINLMNVSETSFVGCVQNTTT
EDQLLFGCRLKGMHTVNSKWLSVGTHYFITVMASGPSPCPLGLRLNVTVKQQFCQESLSS
EFCSGHGKCLSEAWSKTYSCHCQPPFSGKY
CQELDACSFKPCKNNGSCINKRENWDEQAY
ECVCHPPFTGKNCSEIIGQCQPHVCFHGNCSNITSNSFICECDEQFSGPFCEVSAKPCVS
LLFWKRGICPNSSSAYTYECPKGSSSQNGETDVSEFSLVPCQNGTDCIKISNDVMCICSP
IFTDLLCKSIQTSCESFPLRNNATCKKCEKDYPCSCISGFTEKNCEKAIDHCKLLSINCL
NEEWCFNIIGRFKYVCIPGCTKNPCWFLKNVYLIHQHLCYCGVTFHGICQDKGPAQFEYV
WQLGFAGSEGEKCQGVIDAYFFLAANCTEDATYVNDPEDNNSSCWFPHEGTKEICANGCS
CLSEEDSQEYRYLCFLRWAGNMYLENTTDDQENECQHEAVCKDEINRPRCSCSLSYIGRL
CVVNVDYCLGNHSISVHGLCLALSHNCNCSGLQRYERNICEIDTEDCKSASCKNGTTSTH
LRGYFFRKCVPGFKGTQCEIDIDECASHPCKNGATCIDQPGNYFCQCVPPFKVVDGFSCL
CNPGYVGIRCEQDIDDCILNACEHNSTCKDLHLSYQCVCLSDWEGNFCEQESNECKMNPC
KNNSTCTDLYKSYRCECTSGWTGQN
CSEEINECDSDPCMNGGLCHESTIPGQFVCLCPPL
YTGQFCHQRYNLCDLLHNPCRNNSTCLALVDANQHCICREEFEGKNCEIDVKDCLFLSCQ
DYGDCEDMVNNFRCICRPGF
SGSLCEIEINECSSEPCKNNGTCVDLTNRFFCNCEPEYHG
PF
CELDVNKCKISPCLDEENCVYRTDGYNCLCAPGYTGINCEINLDECLSEPCLHDGVCI
DGINHYTCDCKSGFFGTH
CETNANDCLSNPCLHGRCTELINEYPCSCDADGTSTQCKIKI
NDCTSIPCMNEGFCQKSAHGFTCICPRGYTGAYCEKSIDNCAEPELNSVICLNGGICVDG
PGHTFDCRCLPGFSGQF
CEININECSSSPCLHGADCEDHINGYVCKCQPGWSGHHCENEL
ECIPNSCVHELCMENEPGSTCLCTPGFMTCSIGLLCGDEIRRITCLTPIFQRTDPISTQT
YTIPPSETLVSSFPSIKATRIPAIMDTYPVDQGPKQTGIVKHDILPTTGLATLRISTPLE
SYLLQELIVTRELSAKHSLLSSADVSSSRFLNFGIRDPAQIVQDKTSVSHMPIRTSAATL
GFFFPDRRARTPFIMSSLMSDFIFPTQSLLFENCQTVALSATPTTSVIRSIPGADIELNR
QSLLSRGFLLIAASISATPVVSRGAQEDIEEYSADSLISRREHWRLLSPSMSPIFPAKVI
ISKQVTILNSSALHRFSTKAFNPSEYQAITEASSNQRLTNIKSQAADSLRELSQTCATCS
MTEIKSSREFSDQVLHSKQSHFYETFWMNSAILASWYALMGAQTITSGHSFSSATEITPS
VAFTEVPSLFPSKKSAKRTILSSSLEESITLSSNLDVNLCLDKTCLSIVPSQTISSDLMN
SDLTSKMTTDELSVSENILKLLKIRQYGITMGPTEVLNQESLLDMEKSKGSHTLFKLHPS
DSSLDFELNLQIYPDVTLKTYSEITHANDFKNNLPPLTGSVPDFSEVTTNVAFYTVSATP
ALSIQTSSSMSVIRPDWPYFTDYMTSLKKEVKTSSEWSKWELQPSVQYQEFPTASRHLPF
TRSLTLSSLESILAPQRLMISDFSCVRYYGDSYLEFQNVALNPQNNISLEFQTFSSYGLL
LYVKQDSNLVDGFFIQLFIENGTLKYHFYCPGEAKFKSINTTVRVDNGQKYTLLIRQELD
PCNAELTILGRNTQICESINHVLGKPLPKSGSVFIGGFPDLHGKIQMPVPVKNFTGCIEV
IEINN
WRSFIPSKAVKNYHINNCRSQGFMLSPTASFVDASDVTQGVDTMWTSVSPSVAAP
SVCQQDVCHNGGTCHAIFLSSGIVSFQCDCPLHFTGRFCEKDAGLFFPSFNGNSYLELPF
LKFVLEKEHNRTVTIYLTIKTNSLNGTILYSNGNNCGKQFLHLFLVEGRPSVKYGCGNSQ
NILTVSANYSINTNAFTPITIRYTTPVGSPGVVCMIEMTADGKPPVQKKDTEISHASQAY
FESMFLGHIPANVQIHKKAGPVYGFRGCILDLQVNNK
EFFIIDEARHGKNIENCHVPWCA
HHLCRNNGTCISDNENLFCECPRLYSGKLCQFASCENNPCGNGATCVPKSGTDIVCLCPY
GRSGPLCTDAINITQPRFSGTDAFGYTSFLAYSRISDISFHYEFHLKFQLANNHSALQNN
LIFFTGQKGHGLNGDDFLAVGLLNGSVVYSYNLGSGIASIRSEPLNLSLGVHTVHLGKFF
QEGWLKVDDHKNKSIIAPGRLVGLNVFSQFYVGGYSEYTPDLLPNGADFKNGFQGCIFTL
QVRTE
KDGHFRGLGNPEGHPNAGRSVGQCHASPCSLMKCGNGGTCIESGTSVYCNCTTGW
KGSF
CTETVSTCDPEHDPPHHCSRGATCISLPHGYTCFCPLGTTGIYCEQALILIVILEK
PKPAERKVKKEALSISDPSFRSNELSWMSFASFHVRKKTHIQLQFQPLAADGILFYAAQH
LKAQSGDFLCISLVNSSVQLRYNLGDRTIILETLQKVTINGSTWHIIKAGRVGAEGYLDL
DGINVTEKASTKMSSLDTNTDFYIGGVSSLNLVNPMAIENEPVGFQGCIRQVIINNQ
ELQ
LTEFGAKGGSNVGDCDGTACGYNTCRNGGECTVNGTTFSCRCLPDWAGNTCNQSVSCLNN
LCLHQSLCIPDQSFSYSCLCTLGWVGRYCENKTSFSTAKFMGNSYIKYIDPNYRMRNLQF
TTISLNFSTTKTEGLIVWMGIAQNEENDFLAIGLHNQTLKIAVNLGERISVPMSYNNGTF
CCNKWHHVVVIQNQTLIKAYINNSLILSEDIDPHKNFVALNYDGICYLGGFEYGRKVNIV
TQEIFKTNFVGKIKDVVFFQE
PKNIELIKLEGYNVYDGDEQNEVT
Sequence length 3165
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
2457
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormality of the eye Likely pathogenic; Pathogenic rs980430860 RCV001814363
Autosomal recessive retinitis pigmentosa Pathogenic; Likely pathogenic rs786205652, rs752953889, rs751629543, rs868349465, rs928803207, rs779372264, rs34676630, rs1766687373 RCV001257880
RCV001272875
RCV001271839
RCV001257882
RCV001274881
RCV001257881
RCV001257884
RCV001257883
Cone-rod dystrophy Likely pathogenic; Pathogenic rs2150022860 RCV005419184
EYS-related disorder Likely pathogenic; Pathogenic rs933169926, rs1770112191, rs527236076, rs527236067, rs137853190, rs749909863, rs373441420, rs758109813, rs770748359, rs2533169906, rs868349465, rs371032798, rs769824975, rs780433094, rs779372264
View all (1 more)
RCV003416296
RCV004752116
RCV003905241
RCV004751283
RCV003914789
RCV003895170
RCV003398889
RCV004751416
RCV004751444
RCV003939055
RCV004751660
RCV004751720
RCV003918614
RCV004751869
RCV004751877
RCV003983852
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Blurred vision Uncertain significance rs1185686653 RCV000626763
Central areolar choroidal dystrophy Conflicting classifications of pathogenicity rs915505702 RCV001199689
Central scotoma Uncertain significance rs1185686653 RCV000626763
Cervical cancer Uncertain significance rs1241787129 RCV005910973
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Astigmatism Associate 35109811
Blood Coagulation Disorders Inherited Associate 32218477
Capsule Opacification Associate 31944634
Carcinoma Renal Cell Associate 24479813
Cardiotoxicity Associate 29247589
Cataract Associate 34689181, 40725401
Color Vision Defects Associate 31944634
Cone Rod Dystrophies Associate 20554613, 29550188, 32218477
Diabetes Mellitus Type 2 Associate 36674502
Disease Associate 34689181, 39970144