Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
342908
Gene name Gene Name - the full gene name approved by the HGNC.
Zinc finger protein 404
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ZNF404
Synonyms (NCBI Gene) Gene synonyms aliases
-
Chromosome Chromosome number
19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
19q13.31
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT019824 hsa-miR-375 Microarray 20215506
MIRT1523938 hsa-miR-1227 CLIP-seq
MIRT1523939 hsa-miR-455-5p CLIP-seq
MIRT1523940 hsa-miR-532-5p CLIP-seq
MIRT2158382 hsa-miR-412 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IBA 21873635
GO:0000977 Function RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA 21873635
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA 21873635
GO:0001227 Function DNA-binding transcription repressor activity, RNA polymerase II-specific IBA 21873635
GO:0005515 Function Protein binding IPI 25416956
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein
UniProt ID Q494X3
Protein name Zinc finger protein 404
Protein function May be involved in transcriptional regulation.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01352 KRAB 5 46 KRAB box Family
PF00096 zf-C2H2 159 181 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 187 209 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 215 237 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 271 293 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 299 321 Zinc finger, C2H2 type Domain
PF13912 zf-C2H2_6 327 352 Domain
PF00096 zf-C2H2 355 377 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 383 405 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 411 433 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 439 461 Zinc finger, C2H2 type Domain
PF13912 zf-C2H2_6 467 492 Domain
PF00096 zf-C2H2 495 517 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 523 546 Zinc finger, C2H2 type Domain
Sequence
Sequence length 552
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
29915430
Breast carcinoma Breast Carcinoma rs80359671, rs11540652, rs28934575, rs28897672, rs137886232, rs193922376, rs80357783, rs80359306, rs80359405, rs80359507, rs80359598, rs80358429, rs397507683, rs397515636, rs80359451
View all (71 more)
29915430
Marfan syndrome Mammary Carcinoma, Human rs137854456, rs137854457, rs267606796, rs137854458, rs137854459, rs137854460, rs137854470, rs137854471, rs267606797, rs137854461, rs137854462, rs137854463, rs869025419, rs137854464, rs137854465
View all (942 more)
29915430
Associations from Text Mining
Disease Name Relationship Type References
Breast Neoplasms Associate 28957321