Gene Gene information from NCBI Gene database.
Entrez ID 3280
Gene name Hes family bHLH transcription factor 1
Gene symbol HES1
Synonyms (NCBI Gene)
HES-1HHLHRYbHLHb39
Chromosome 3
Chromosome location 3q29
Summary This protein belongs to the basic helix-loop-helix family of transcription factors. It is a transcriptional repressor of genes that require a bHLH protein for their transcription. The protein has a particular type of basic domain that contains a helix int
miRNA miRNA information provided by mirtarbase database.
135
miRTarBase ID miRNA Experiments Reference
MIRT002953 hsa-miR-23a-3p Luciferase reporter assay 15066185
MIRT002953 hsa-miR-23a-3p ImmunofluorescenceLuciferase reporter assayNorthern blotWestern blot 12808467
MIRT000208 hsa-miR-199b-5p FlowImmunohistochemistryIn situ hybridizationLuciferase reporter assayqRT-PCRWestern blot 19308264
MIRT006893 hsa-miR-524-5p SNB19 22871495
MIRT006893 hsa-miR-524-5p SNB19 22871495
Transcription factors Transcription factors information provided by TRRUST V2 database.
9
Transcription factor Regulation Reference
LMO3 Repression 21573214
NFKB1 Unknown 17876798
NHLH2 Repression 21573214
NOTCH3 Repression 22117196
PITX1 Repression 21425961
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
186
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IDA 12032823, 12535671
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0000785 Component Chromatin IEA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
139605 5192 ENSG00000114315
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q14469
Protein name Transcription factor HES-1 (Class B basic helix-loop-helix protein 39) (bHLHb39) (Hairy and enhancer of split 1) (Hairy homolog) (Hairy-like protein) (hHL)
Protein function Transcriptional repressor of genes that require a bHLH protein for their transcription. May act as a negative regulator of myogenesis by inhibiting the functions of MYOD1 and ASH1. Binds DNA on N-box motifs: 5'-CACNAG-3' with high affinity and o
PDB 2MH3 , 7C4O
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00010 HLH 35 92 Helix-loop-helix DNA-binding domain Domain
PF07527 Hairy_orange 109 148 Hairy Orange Domain
Sequence
MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQ
RAQMTAALSTDPSVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLANCMT
QINAMTYPGQPHPALQAPPPPPPGPGGPQHAP
FAPPPPLVPIPGGAAPPPGGAPCKLGSQAGEAAKVFGGFQVVPAPDGQFAFLIPNGAFAH
SGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRPWRN
Sequence length 280
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Fanconi anemia pathway
Notch signaling pathway
Maturity onset diabetes of the young
Human papillomavirus infection
Epstein-Barr virus infection
Pathways in cancer
Breast cancer
  Constitutive Signaling by NOTCH1 PEST Domain Mutants
Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants
RUNX3 regulates NOTCH signaling
NOTCH4 Intracellular Domain Regulates Transcription