Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	3237
Gene name Gene Name - the full gene name approved by the HGNC.	Homeobox D11
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	HOXD11
Synonyms (NCBI Gene) Gene synonyms aliases	HOX4, HOX4F
Chromosome Chromosome number	2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	2q31.1
Summary Summary of gene provided in NCBI Entrez Gene.	This gene belongs to the homeobox family of genes. The homeobox genes encode a highly conserved family of transcription factors that play an important role in morphogenesis in all multicellular organisms. Mammals possess four similar homeobox gene cluster

Show/Hide all(100)

miRTarBase ID	miRNA	Experiments	Reference
MIRT051956	hsa-let-7b-5p	CLASH	23622248
MIRT037516	hsa-miR-744-5p	CLASH	23622248
MIRT616275	hsa-miR-4706	HITS-CLIP	23824327
MIRT616276	hsa-miR-4749-5p	HITS-CLIP	23824327
MIRT037516	hsa-miR-744-5p	HITS-CLIP	23824327
MIRT616274	hsa-miR-4723-5p	HITS-CLIP	23824327
MIRT616273	hsa-miR-5698	HITS-CLIP	23824327
MIRT616271	hsa-miR-6870-5p	HITS-CLIP	23824327
MIRT616272	hsa-miR-7111-5p	HITS-CLIP	23824327
MIRT616270	hsa-miR-6795-5p	HITS-CLIP	23824327
MIRT616269	hsa-miR-6887-5p	HITS-CLIP	23824327
MIRT616268	hsa-miR-450a-5p	HITS-CLIP	23824327
MIRT616267	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT616277	hsa-miR-329-5p	HITS-CLIP	23824327
MIRT616275	hsa-miR-4706	HITS-CLIP	23824327
MIRT616276	hsa-miR-4749-5p	HITS-CLIP	23824327
MIRT037516	hsa-miR-744-5p	HITS-CLIP	23824327
MIRT616274	hsa-miR-4723-5p	HITS-CLIP	23824327
MIRT616273	hsa-miR-5698	HITS-CLIP	23824327
MIRT616271	hsa-miR-6870-5p	HITS-CLIP	23824327
MIRT616272	hsa-miR-7111-5p	HITS-CLIP	23824327
MIRT616270	hsa-miR-6795-5p	HITS-CLIP	23824327
MIRT616269	hsa-miR-6887-5p	HITS-CLIP	23824327
MIRT616268	hsa-miR-450a-5p	HITS-CLIP	23824327
MIRT616267	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT557037	hsa-miR-20a-5p	PAR-CLIP	21572407
MIRT557036	hsa-miR-526b-3p	PAR-CLIP	21572407
MIRT557035	hsa-miR-519d-3p	PAR-CLIP	21572407
MIRT557034	hsa-miR-20b-5p	PAR-CLIP	21572407
MIRT557033	hsa-miR-17-5p	PAR-CLIP	21572407
MIRT557032	hsa-miR-106b-5p	PAR-CLIP	21572407
MIRT557031	hsa-miR-106a-5p	PAR-CLIP	21572407
MIRT557030	hsa-miR-93-5p	PAR-CLIP	21572407
MIRT557029	hsa-miR-32-3p	PAR-CLIP	21572407
MIRT557028	hsa-miR-130a-3p	PAR-CLIP	21572407
MIRT557027	hsa-miR-130b-3p	PAR-CLIP	21572407
MIRT557026	hsa-miR-301a-3p	PAR-CLIP	21572407
MIRT557025	hsa-miR-301b-3p	PAR-CLIP	21572407
MIRT557024	hsa-miR-3666	PAR-CLIP	21572407
MIRT557023	hsa-miR-4295	PAR-CLIP	21572407
MIRT557022	hsa-miR-454-3p	PAR-CLIP	21572407
MIRT557021	hsa-miR-205-3p	PAR-CLIP	21572407
MIRT557020	hsa-miR-4326	PAR-CLIP	21572407
MIRT557019	hsa-miR-5701	PAR-CLIP	21572407
MIRT557018	hsa-miR-513a-5p	PAR-CLIP	21572407
MIRT557017	hsa-miR-27a-3p	PAR-CLIP	21572407
MIRT557016	hsa-miR-27b-3p	PAR-CLIP	21572407
MIRT557015	hsa-miR-3674	PAR-CLIP	21572407
MIRT439125	hsa-miR-10b-5p	3'LIFE	25074381
MIRT439125	hsa-miR-10b-5p	3'LIFE	25074381
MIRT616275	hsa-miR-4706	HITS-CLIP	23824327
MIRT616276	hsa-miR-4749-5p	HITS-CLIP	23824327
MIRT037516	hsa-miR-744-5p	HITS-CLIP	23824327
MIRT616274	hsa-miR-4723-5p	HITS-CLIP	23824327
MIRT616273	hsa-miR-5698	HITS-CLIP	23824327
MIRT616271	hsa-miR-6870-5p	HITS-CLIP	23824327
MIRT616272	hsa-miR-7111-5p	HITS-CLIP	23824327
MIRT616270	hsa-miR-6795-5p	HITS-CLIP	23824327
MIRT616269	hsa-miR-6887-5p	HITS-CLIP	23824327
MIRT616268	hsa-miR-450a-5p	HITS-CLIP	23824327
MIRT616267	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT616277	hsa-miR-329-5p	HITS-CLIP	23824327
MIRT616275	hsa-miR-4706	HITS-CLIP	23824327
MIRT616276	hsa-miR-4749-5p	HITS-CLIP	23824327
MIRT037516	hsa-miR-744-5p	HITS-CLIP	23824327
MIRT616274	hsa-miR-4723-5p	HITS-CLIP	23824327
MIRT616273	hsa-miR-5698	HITS-CLIP	23824327
MIRT616271	hsa-miR-6870-5p	HITS-CLIP	23824327
MIRT616272	hsa-miR-7111-5p	HITS-CLIP	23824327
MIRT616270	hsa-miR-6795-5p	HITS-CLIP	23824327
MIRT616269	hsa-miR-6887-5p	HITS-CLIP	23824327
MIRT616268	hsa-miR-450a-5p	HITS-CLIP	23824327
MIRT616267	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT557037	hsa-miR-20a-5p	PAR-CLIP	21572407
MIRT557036	hsa-miR-526b-3p	PAR-CLIP	21572407
MIRT557035	hsa-miR-519d-3p	PAR-CLIP	21572407
MIRT557034	hsa-miR-20b-5p	PAR-CLIP	21572407
MIRT557033	hsa-miR-17-5p	PAR-CLIP	21572407
MIRT557032	hsa-miR-106b-5p	PAR-CLIP	21572407
MIRT557031	hsa-miR-106a-5p	PAR-CLIP	21572407
MIRT557030	hsa-miR-93-5p	PAR-CLIP	21572407
MIRT557029	hsa-miR-32-3p	PAR-CLIP	21572407
MIRT557028	hsa-miR-130a-3p	PAR-CLIP	21572407
MIRT557027	hsa-miR-130b-3p	PAR-CLIP	21572407
MIRT557026	hsa-miR-301a-3p	PAR-CLIP	21572407
MIRT557025	hsa-miR-301b-3p	PAR-CLIP	21572407
MIRT557024	hsa-miR-3666	PAR-CLIP	21572407
MIRT557023	hsa-miR-4295	PAR-CLIP	21572407
MIRT557022	hsa-miR-454-3p	PAR-CLIP	21572407
MIRT557021	hsa-miR-205-3p	PAR-CLIP	21572407
MIRT557020	hsa-miR-4326	PAR-CLIP	21572407
MIRT557019	hsa-miR-5701	PAR-CLIP	21572407
MIRT557018	hsa-miR-513a-5p	PAR-CLIP	21572407
MIRT557017	hsa-miR-27a-3p	PAR-CLIP	21572407
MIRT557016	hsa-miR-27b-3p	PAR-CLIP	21572407
MIRT557015	hsa-miR-3674	PAR-CLIP	21572407
MIRT1053742	hsa-miR-3136-3p	CLIP-seq
MIRT1053743	hsa-miR-3685	CLIP-seq
MIRT2012202	hsa-miR-1262	CLIP-seq
MIRT2012203	hsa-miR-4701-3p	CLIP-seq

Show/Hide all(16)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000785	Component	Chromatin	ISA
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IEA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	ISA
GO:0001658	Process	Branching involved in ureteric bud morphogenesis	ISS
GO:0003677	Function	DNA binding	IEA
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0009953	Process	Dorsal/ventral pattern formation	ISS
GO:0060272	Process	Embryonic skeletal joint morphogenesis	IBA
GO:1990837	Function	Sequence-specific double-stranded DNA binding	IDA	28473536

MIM	HGNC	e!Ensembl
142986	5134	ENSG00000128713

Protein

UniProt ID

P31277

Protein name

Homeobox protein Hox-D11 (Homeobox protein Hox-4F)

Protein function

Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF12045	DUF3528	26 → 80	Protein of unknown function (DUF3528)	Family
PF12045	DUF3528	105 → 194	Protein of unknown function (DUF3528)	Family
PF00046	Homeodomain	267 → 323	Homeodomain	Domain

Sequence

MNDFDECGQSAASMYLPGCAYYVAPSDFASKPSFLSQPSSCQMTFPYSSNLAPHVQPVRE
VAFRDYGLERAKWPYRGGGGGGSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAA
EEAAMQRELLPPAGRRPDVLFKAPEPVCAAPGPPHGPAGAASNFYSAVGRNGILPQGFDQ
FYEAAPGPPFAGPQPPPPPAPPQPEGAADKGDPRTGAGGGGGSPCTKATPGSEPKGAAEG
SGGDGEGPPGEAGAEKSSSAVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLS
RMLNLTDRQVKIWFQNRRMKEKKLNRDRLQYFTGNPLF

Sequence length

338

Interactions

View interactions

HOXD11 (homeobox D11)