Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
3133
Gene name Gene Name - the full gene name approved by the HGNC.
Major histocompatibility complex, class I, E
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
HLA-E
Synonyms (NCBI Gene) Gene synonyms aliases
HLA-6.2, QA1
Chromosome Chromosome number
6
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
6p22.1
Summary Summary of gene provided in NCBI Entrez Gene.
HLA-E belongs to the HLA class I heavy chain paralogues. This class I molecule is a heterodimer consisting of a heavy chain and a light chain (beta-2 microglobulin). The heavy chain is anchored in the membrane. HLA-E binds a restricted subset of peptides
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT049514 hsa-miR-92a-3p CLASH 23622248
MIRT038407 hsa-miR-296-3p CLASH 23622248
MIRT722051 hsa-miR-124-3p HITS-CLIP 19536157
MIRT722049 hsa-miR-5582-5p HITS-CLIP 19536157
MIRT722048 hsa-miR-605-3p HITS-CLIP 19536157
Transcription factors
Transcription factor Regulation Reference
HIVEP2 Unknown 1409593
MYC Activation 8206526
MYCN Unknown 8895520
STAT1 Unknown 11137213
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane TAS
GO:0001815 Process Positive regulation of antibody-dependent cellular cytotoxicity IDA 30134159
GO:0001916 Process Positive regulation of T cell mediated cytotoxicity IBA 21873635
GO:0001916 Process Positive regulation of T cell mediated cytotoxicity IDA 25631937
GO:0002250 Process Adaptive immune response IDA 25631937
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
143010 4962 ENSG00000204592
Protein
UniProt ID P13747
Protein name HLA class I histocompatibility antigen, alpha chain E (MHC class I antigen E) [Cleaved into: Soluble HLA class I histocompatibility antigen, alpha chain E (sHLA-E)]
Protein function Non-classical major histocompatibility class Ib molecule involved in immune self-nonself discrimination. In complex with B2M/beta-2-microglobulin binds nonamer self-peptides derived from the signal sequence of classical MHC class Ia molecules (V
PDB 1KPR , 1KTL , 1MHE , 2ESV , 3AM8 , 3BZE , 3BZF , 3CDG , 3CII , 5W1V , 5W1W , 6GGM , 6GH1 , 6GH4 , 6GHN , 6GL1 , 6ZKW , 6ZKX , 6ZKY , 6ZKZ , 7BH8 , 7NDQ , 7NDT , 7NDU , 7P49 , 7P4B , 8QFY , 8RLT , 8RLU , 8RLV
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00129 MHC_I 22 200 Class I Histocompatibility antigen, domains alpha 1 and 2 Domain
PF07654 C1-set 207 287 Immunoglobulin C1-set domain Domain
PF06623 MHC_I_C 334 355 MHC_I C-terminus Family
Tissue specificity TISSUE SPECIFICITY: Expressed in secretory endometrial cells during pregnancy (at protein level). The expression in nonlymphoid tissues is restricted to endothelial cells from all types of vessels, including arteries, veins, capillaries, and lymphatics (a
Sequence
Sequence length 358
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Endocytosis
Phagosome
Cellular senescence
Cell adhesion molecules
Antigen processing and presentation
Natural killer cell mediated cytotoxicity
Type I diabetes mellitus
Human cytomegalovirus infection
Human papillomavirus infection
Human T-cell leukemia virus 1 infection
Kaposi sarcoma-associated herpesvirus infection
Herpes simplex virus 1 infection
Epstein-Barr virus infection
Human immunodeficiency virus 1 infection
Viral carcinogenesis
Autoimmune thyroid disease
Allograft rejection
Graft-versus-host disease
Viral myocarditis
  ER-Phagosome pathway
Endosomal/Vacuolar pathway
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
DAP12 interactions
DAP12 signaling
Interferon gamma signaling
Interferon alpha/beta signaling
Antigen Presentation: Folding, assembly and peptide loading of class I MHC
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Schizophrenia Schizophrenia rs13447324, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346
View all (12 more)
23177929, 22433715, 22187495, 24888570, 24365204