Gene Gene information from NCBI Gene database.
Entrez ID 3097
Gene name HIVEP zinc finger 2
Gene symbol HIVEP2
Synonyms (NCBI Gene)
HIV-EP2MBP-2MIBP1MRD43SHN2ZAS2ZNF40B
Chromosome 6
Chromosome location 6q24.2
Summary This gene encodes a member of a family of closely related, large, zinc finger-containing transcription factors. The encoded protein regulates transcription by binding to regulatory regions of various cellular and viral genes that maybe involved in growth,
SNPs SNP information provided by dbSNP.
21
SNP ID Visualize variation Clinical significance Consequence
rs373421716 G>A,C Conflicting-interpretations-of-pathogenicity Missense variant, coding sequence variant
rs761993070 C>A,G,T Pathogenic Missense variant, coding sequence variant, stop gained
rs869312841 G>A Pathogenic Stop gained, coding sequence variant
rs869312842 G>A Pathogenic Stop gained, coding sequence variant
rs869312843 C>A Pathogenic Stop gained, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
191
miRTarBase ID miRNA Experiments Reference
MIRT000974 hsa-miR-155-5p Luciferase reporter assay 18367535
MIRT000974 hsa-miR-155-5p Luciferase reporter assayqRT-PCRWestern blot 20427544
MIRT020335 hsa-miR-130b-3p Sequencing 20371350
MIRT000974 hsa-miR-155-5p Reporter assay;Other 20584899
MIRT041806 hsa-miR-484 CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
11
GO ID Ontology Definition Evidence Reference
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0003677 Function DNA binding IEA
GO:0003677 Function DNA binding TAS 2022670, 2247438
GO:0005515 Function Protein binding IPI 20936779, 28514442, 33961781, 36931259
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
143054 4921 ENSG00000010818
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P31629
Protein name Transcription factor HIVEP2 (Human immunodeficiency virus type I enhancer-binding protein 2) (HIV-EP2) (MHC-binding protein 2) (MBP-2)
Protein function This protein specifically binds to the DNA sequence 5'-GGGACTTTCC-3' which is found in the enhancer elements of numerous viral promoters such as those of SV40, CMV, or HIV1. In addition, related sequences are found in the enhancer elements of a
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00096 zf-C2H2 189 211 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 1799 1821 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 1827 1851 Zinc finger, C2H2 type Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in brain and skeletal muscle. {ECO:0000269|PubMed:10207097}.
Sequence
MDTGDTALGQKATSRSGETDKASGRWRQEQSAVIKMSTFGSHEGQRQPQIEPEQIGNTAS
AQLFGSGKLASPSEVVQQVAEKQYPPHRPSPYSCQHSLSFPQHSLPQGVMHSTKPHQSLE
GPPWLFPGPLPSVASEDLFPFPIHGHSGGYPRKKISSLNPAYSQYSQKSIEQAEEAHKKE
HKPKKPGKYICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHA
HAIKAGLVPFTESAVSKLDLEAGFIDVEAEIHSDGEQSTDTDEESSLFAEASDKMSPGPP
IPLDIASRGGYHGSLEESLGGPMKVPILIIPKSGIPLPNESSQYIGPDMLPNPSLNTKAD
DSHTVKQKLALRLSEKKGQDSEPSLNLLSPHSKGSTDSGYFSRSESAEQQISPPNTNAKS
YEEIIFGKYCRLSPRNALSVTTTSQERAAMGRKGIMEPLPHVNTRLDVKMFEDPVSQLIP
SKGDVDPSQTSMLKSTKFNSESRQPQIIPSSIRNEGKLYPANFQGSNPVLLEAPVDSSPL
IRSNSVPTSSATNLTIPPSLRGSHSFDERMTGSDDVFYPGTVGIPPQRMLRRQAAFELPS
VQEGHVEVEHHGRMLKGISSSSLKEKKLSPGDRVGYDYDVCRKPYKKWEDSETPKQNYRD
ISCLSSLKHGGEYFMDPVVPLQGVPSMFGTTCENRKRRKEKSVGDEEDTPMICSSIVSTP
VGIMASDYDPKLQMQEGVRSGFAMAGHENLSHGHTERFDPCRPQLQPGSPSLVSEESPSA
IDSDKMSDLGGRKPPGNVISVIQHTNSLSRPNSFERSESAELVACTQDKAPSPSETCDSE
ISEAPVSPEWAPPGDGAESGGKPSPSQQVQQQSYHTQPRLVRQHNIQVPEIRVTEEPDKP
EKEKEAQSKEPEKPVEEFQWPQRSETLSQLPAEKLPPKKKRLRLADMEHSSGESSFESTG
TGLSRSPSQESNLSHSSSFSMSFEREETSKLSALPKQDEFGKHSEFLTVPAGSYSLSVPG
HHHQKEMRRCSSEQMPCPHPAEVPEVRSKSFDYGNLSHAPVSGAAASTVSPSRERKKCFL
VRQASFSGSPEISQGEVGMDQSVKQEQLEHLHAGLRSGWHHGPPAVLPPLQQEDPGKQVA
GPCPPLSSGPLHLAQPQIMHMDSQESLRNPLIQPTSYMTSKHLPEQPHLFPHQETIPFSP
IQNALFQFQYPTVCMVHLPAQQPPWWQAHFPHPFAQHPQKSYGKPSFQTEIHSSYPLEHV
AEHTGKKPAEYAHTKEQTYPCYSGASGLHPKNLLPKFPSDQSSKSTETPSEQVLQEDFAS
ANAGSLQSLPGTVVPVRIQTHVPSYGSVMYTSISQILGQNSPAIVICKVDENMTQRTLVT
NAAMQGIGFNIAQVLGQHAGLEKYPIWKAPQTLPLGLESSIPLCLPSTSDSVATLGGSKR
MLSPASSLELFMETKQQKRVKEEKMYGQIVEELSAVELTNSDIKKDLSRPQKPQLVRQGC
ASEPKDGLQSGSSSFSSLSPSSSQDYPSVSPSSREPFLPSKEMLSGSRAPLPGQKSSGPS
ESKESSDELDIDETASDMSMSPQSSSLPAGDGQLEEEGKGHKRPVGMLVRMASAPSGNVA
DSTLLLTDMADFQQILQFPSLRTTTTVSWCFLNYTKPNYVQQATFKSSVYASWCISSCNP
NPSGLNTKTTLALLRSKQKITAEIYTLAAMHRPGTGKLTSSSAWKQFTQMKPDASFLFGS
KLERKLVGNILKERGKGDIHGDKDIGSKQTEPIRIKIFEGGYKSNEDYVYVRGRGRGKYI
CEECGIRCKKPSMLKKHIRTH
TDVRPYVCKLCNFAFKTKGNLTKHMKSKAHMKKCLELGV
SMTSVDDTETEEAENLEDLHKAAEKHSMSSISTDHQFSDAEESDGEDGDDNDDDDEDEDD
FDDQGDLTPKTRSRSTSPQPPRFSSLPVNVGAVPHGVPSDSSLGHSSLISYLVTLPSIRV
TQLMTPSDSCEDTQMTEYQRLFQSKSTDSEPDKDRLDIPSCMDEECMLPSEPSSSPRDFS
PSSHHSSPGYDSSPCRDNSPKRYLIPKGDLSPRRHLSPRRDLSPMRHLSPRKEAALRREM
SQRDVSPRRHLSPRRPVSPGKDITARRDLSPRRERRYMTTIRAPSPRRALYHNPPLSMGQ
YLQAEPIVLGPPNLRRGLPQVPYFSLYGDQEGAYEHPGSSLFPEGPNDYVFSHLPLHSQQ
QVRAPIPMVPVGGIQMVHSMPPALSSLHPSPTLPLPMEGFEEKKGASGESFSKDPYVLSK
QHEKRGPHALQSSGPPSTPSSPRLLMKQSTSEDSLNATEREQEENIQTCTKAIASLRIAT
EEAALLGPDQPARVQEPHQNPLGSAHVSIRHFSRPEPGQPCTSATHPDLHDGEKDNFGTS
QTPLAHSTFYSKSCVDDKQLDFHSSKELSSSTEESKDPSSEKSQLH
Sequence length 2446
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
264
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Angelman syndrome-like Pathogenic rs1554275163, rs1582843150 RCV000852329
RCV000852369
HIVEP2-related disorder Pathogenic; Likely pathogenic rs869312847, rs2482796579 RCV000509366
RCV004536718
Intellectual disability Pathogenic; Likely pathogenic rs869312841, rs1774993424, rs1775510548 RCV004798812
RCV001260723
RCV001260724
Intellectual disability, autosomal dominant 43 Pathogenic; Likely pathogenic rs2114653975, rs2114611238, rs2114611687, rs2114611483, rs2482839679, rs761993070, rs869312844, rs869312842, rs869312843, rs869312841, rs869312847, rs878853251, rs878853269, rs2482859580, rs2482811651
View all (16 more)
RCV001542656
RCV001725794
RCV002250042
RCV002274270
RCV002795914
RCV000225138
RCV000225303
RCV001265398
RCV000225219
RCV000225218
RCV001265396
RCV000225131
RCV000225329
RCV003223512
RCV003314106
RCV003314499
RCV003335834
RCV003335896
RCV003387678
RCV003592051
RCV003883362
RCV003985171
RCV004555498
RCV001265253
RCV001265397
RCV001265390
RCV000760261
RCV001265394
RCV001265392
RCV001265143
RCV001265252
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Likely benign; Benign rs368953291, rs201202080 RCV005906307
RCV005903006
Autism spectrum disorder Likely benign rs2482773624 RCV003127345
Congenital ocular coloboma Conflicting classifications of pathogenicity rs528292477 RCV005626844
Epilepsy Likely benign rs201009823 RCV005626373
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Anxiety Associate 26153216, 35052433
Asthma Associate 32119686
Attention Deficit Disorder with Hyperactivity Associate 35052433
Autism Spectrum Disorder Associate 35052433
Congenital Abnormalities Associate 27003583
Developmental Disabilities Associate 27003583
Hyperkinesis Associate 26153216
Intellectual Disability Associate 26153216, 27003583
Leukemia Myeloid Acute Associate 35535739
Memory Disorders Associate 26153216