Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
30833
Gene name Gene Name - the full gene name approved by the HGNC.
5', 3'-nucleotidase, cytosolic
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
NT5C
Synonyms (NCBI Gene) Gene synonyms aliases
DNT, DNT1, HEL74, P5N2, PN-I, PN-II, UMPH2, cdN, dNT-1
Chromosome Chromosome number
17
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
17q25.1
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a nucleotidase that catalyzes the dephosphorylation of the 5` deoxyribonucleotides (dNTP) and 2`(3`)-dNTP and ribonucleotides, but not 5` ribonucleotides. Of the different forms of nucleotidases characterized, this enzyme is unique in it
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT044494 hsa-miR-320a CLASH 23622248
MIRT708324 hsa-miR-3667-3p HITS-CLIP 19536157
MIRT708323 hsa-miR-18a-3p HITS-CLIP 19536157
MIRT708322 hsa-miR-938 HITS-CLIP 19536157
MIRT708321 hsa-miR-6886-3p HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005634 Component Nucleus IDA 10681516
GO:0005737 Component Cytoplasm IDA 10681516
GO:0005829 Component Cytosol IDA
GO:0005829 Component Cytosol TAS
GO:0006195 Process Purine nucleotide catabolic process TAS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
191720 17144 ENSG00000125458
Protein
UniProt ID Q8TCD5
Protein name 5'(3')-deoxyribonucleotidase, cytosolic type (EC 3.1.3.-) (Cytosolic 5',3'-pyrimidine nucleotidase) (Deoxy-5'-nucleotidase 1) (dNT-1)
Protein function Dephosphorylates the 5' and 2'(3')-phosphates of deoxyribonucleotides, with a preference for dUMP and dTMP, intermediate activity towards dGMP, and low activity towards dCMP and dAMP.
PDB 2I7D , 4L57 , 4YIH , 6G2N
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF06941 NT5C 3 195 Family
Tissue specificity TISSUE SPECIFICITY: Detected in skeletal muscle, heart and pancreas. {ECO:0000269|PubMed:10681516}.
Sequence
Sequence length 201
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Purine metabolism
Pyrimidine metabolism
Nicotinate and nicotinamide metabolism
Metabolic pathways
Nucleotide metabolism
  Pyrimidine catabolism
Purine catabolism
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Colorectal cancer Colorectal Carcinoma rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
15814641
Colorectal neoplasms Colorectal Neoplasms rs28929483, rs63751108, rs28929484, rs63749831, rs63750047, rs63751207, rs63749811, rs1553350126, rs63750875, rs63750955, rs587776706, rs63750871, rs587776715, rs63751466, rs63750049
View all (1682 more)
15814641
Associations from Text Mining
Disease Name Relationship Type References
Anemia Hemolytic Associate 15968458
Breast Neoplasms Inhibit 35894707
Hepatitis C Associate 23874742
Leukemia Lymphocytic Chronic B Cell Associate 15454483
Mesothelioma Associate 22905093
Neoplasms Associate 35894707
Poikiloderma with Neutropenia Associate 15968458