Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
2969
Gene name Gene Name - the full gene name approved by the HGNC.
General transcription factor IIi
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
GTF2I
Synonyms (NCBI Gene) Gene synonyms aliases
BAP135, BTKAP1, DIWS, GTFII-I, IB291, SPIN, TFII-I, WBS, WBSCR6
Chromosome Chromosome number
7
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
7q11.23
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a phosphoprotein containing six characteristic repeat motifs. The encoded protein binds to the initiator element (Inr) and E-box element in promoters and functions as a regulator of transcription. This locus, along with several other nei
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT005058 hsa-let-7b-5p Microarray 17699775
MIRT030772 hsa-miR-21-5p Microarray 18591254
MIRT052433 hsa-let-7a-5p CLASH 23622248
MIRT051501 hsa-let-7e-5p CLASH 23622248
MIRT048674 hsa-miR-99a-5p CLASH 23622248
Transcription factors
Transcription factor Regulation Reference
HDAC3 Unknown 21549311
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific NAS 23229069
GO:0001102 Function RNA polymerase II activating transcription factor binding IPI 9334314
GO:0001228 Function DNA-binding transcription activator activity, RNA polymerase II-specific IDA 9334314
GO:0003677 Function DNA binding IEA
GO:0003700 Function DNA-binding transcription factor activity IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
601679 4659 ENSG00000263001
Protein
UniProt ID P78347
Protein name General transcription factor II-I (GTFII-I) (TFII-I) (Bruton tyrosine kinase-associated protein 135) (BAP-135) (BTK-associated protein 135) (SRF-Phox1-interacting protein) (SPIN) (Williams-Beuren syndrome chromosomal region 6 protein)
Protein function Interacts with the basal transcription machinery by coordinating the formation of a multiprotein complex at the C-FOS promoter, and linking specific signal responsive activator complexes. Promotes the formation of stable high-order complexes of
PDB 2D9B , 2DN4 , 2ED2 , 2EJE
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02946 GTF2I 112 186 GTF2I-like repeat Family
PF02946 GTF2I 361 435 GTF2I-like repeat Family
PF02946 GTF2I 466 540 GTF2I-like repeat Family
PF02946 GTF2I 571 645 GTF2I-like repeat Family
PF02946 GTF2I 733 807 GTF2I-like repeat Family
PF02946 GTF2I 868 942 GTF2I-like repeat Family
Tissue specificity TISSUE SPECIFICITY: Ubiquitous. Isoform 1 is strongly expressed in fetal brain, weakly in adult brain, muscle, and lymphoblasts and is almost undetectable in other adult tissues, while the other isoforms are equally expressed in all adult tissues.
Sequence
MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
SFIIKR
PFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
EESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGSHHSSEGNEGTEMEVPAEDSTQHVP
SETSEDPEVEVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITD
LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE
RILLAKERIRFVIKK
HELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAE
ALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR

PELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVF
ESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKK
PELVISYLPPGMASK
INTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGRE
FSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPF
RRPSTFGIPRLEKILRNKAKIKFIIKK
PEMFETAIKESTSSKSPPRKINSSPNVNTTASG
VEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITIN
PGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIR
PFPGLVINNQLVDQSESE
GPVIQESAEPSQLEVPATEEIKETDGSSQIKQEPDPTW
Sequence length 998
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  
  Basal transcription factors
cGMP-PKG signaling pathway
 
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Atrial fibrillation Atrial Fibrillation rs120074192, rs121908590, rs121908593, rs121434558, rs587776851, rs387906612, rs387906613, rs387906614, rs387906615, rs199472687, rs199472705, rs199473324, rs587777336, rs587777339, rs587777557
View all (6 more)
29892015, 30061737
Atrial septal defect Atrial Septal Defects rs137852951, rs137852953, rs137852955, rs267607106, rs104893900, rs104893901, rs104893903, rs606231358, rs606231359, rs137852683, rs606231360, rs104893907, rs104894073, rs1585703301, rs104894074
View all (25 more)
Attention deficit hyperactivity disorder Attention deficit hyperactivity disorder rs786205019
Autism spectrum disorder Autism Spectrum Disorders rs724159978, rs75184679, rs119103221, rs9332964, rs121912562, rs1594344233, rs727504317, rs111033204, rs1801086, rs587784464, rs724159948, rs764659822, rs794727977, rs796052733, rs796052728
View all (51 more)
22048961
Unknown
Disease term Disease name Evidence References Source
Chronic obstructive pulmonary disease Chronic Obstructive Airway Disease 30940143 ClinVar
Congestive heart failure Congestive heart failure ClinVar
Mental depression Depressive disorder ClinVar
Myocardial infarction Myocardial Infarction ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Agnosia Associate 16971481
Anxiety Associate 26285132
Arthritis Rheumatoid Associate 27272985, 31520790
Astrocytoma Associate 28448514
Autism Spectrum Disorder Associate 33208191
Autistic Disorder Associate 25429715
Breast Neoplasms Inhibit 16611241
Breast Neoplasms Associate 31215771, 35317849
Chromosome Duplication Associate 26285132
Cognition Disorders Associate 15994861, 19568270, 22608712