Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
2919
Gene name Gene Name - the full gene name approved by the HGNC.
C-X-C motif chemokine ligand 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CXCL1
Synonyms (NCBI Gene) Gene synonyms aliases
FSP, GRO1, GROa, MGSA, MGSA-a, NAP-3, SCYB1
Chromosome Chromosome number
4
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
4q13.3
Summary Summary of gene provided in NCBI Entrez Gene.
This antimicrobial gene encodes a member of the CXC subfamily of chemokines. The encoded protein is a secreted growth factor that signals through the G-protein coupled receptor, CXC receptor 2. This protein plays a role in inflammation and as a chemoattra
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT023084 hsa-miR-124-3p Microarray 18668037
MIRT023999 hsa-miR-1-3p Microarray 18668037
MIRT613684 hsa-miR-27b-5p HITS-CLIP 23824327
MIRT613684 hsa-miR-27b-5p HITS-CLIP 23824327
MIRT613684 hsa-miR-27b-5p HITS-CLIP 23824327
Transcription factors
Transcription factor Regulation Reference
BRCA1 Repression 22120723
CEBPD Activation 23028973
GATA3 Repression 22120723
HMGA1 Unknown 11112786;7479086
NFKB1 Activation 10530453;15958549
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005102 Function Signaling receptor binding TAS 9079638, 10820279
GO:0005515 Function Protein binding IPI 32296183
GO:0005576 Component Extracellular region TAS
GO:0005615 Component Extracellular space IBA 21873635
GO:0006935 Process Chemotaxis TAS 10820279
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
155730 4602 ENSG00000163739
Protein
UniProt ID P09341
Protein name Growth-regulated alpha protein (C-X-C motif chemokine 1) (GRO-alpha(1-73)) (Melanoma growth stimulatory activity) (MGSA) (Neutrophil-activating protein 3) (NAP-3) [Cleaved into: GRO-alpha(4-73); GRO-alpha(5-73); GRO-alpha(6-73)]
Protein function Has chemotactic activity for neutrophils. May play a role in inflammation and exerts its effects on endothelial cells in an autocrine fashion. In vitro, the processed forms GRO-alpha(4-73), GRO-alpha(5-73) and GRO-alpha(6-73) show a 30-fold high
PDB 1MGS , 1MSG , 1MSH , 1ROD , 8K4O , 8XWA , 8XWV
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00048 IL8 41 100 Small cytokines (intecrine/chemokine), interleukin-8 like Domain
Sequence
MARAALSAAPSNPRLLRVALLLLLLVAAGRRAAGASVATELRCQCLQTLQGIHPKNIQSV
NVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM
LNSDKSN
Sequence length 107
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Cytokine-cytokine receptor interaction
Viral protein interaction with cytokine and cytokine receptor
Chemokine signaling pathway
NF-kappa B signaling pathway
NOD-like receptor signaling pathway
IL-17 signaling pathway
TNF signaling pathway
Alcoholic liver disease
Epithelial cell signaling in Helicobacter pylori infection
Legionellosis
Amoebiasis
Kaposi sarcoma-associated herpesvirus infection
Rheumatoid arthritis
Lipid and atherosclerosis
  Chemokine receptors bind chemokines
G alpha (i) signalling events
Interleukin-10 signaling
Neutrophil degranulation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Arthritis Juvenile arthritis rs1594890601, rs1594882933, rs184370809, rs776489319, rs1594883470 19565504
Unknown
Disease term Disease name Evidence References Source
Chronic obstructive pulmonary disease Chronic Obstructive Airway Disease 23099361 ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Acne Vulgaris Associate 31281837
Acute Coronary Syndrome Associate 30514120
Acute Febrile Encephalopathy Stimulate 15608388
Acute Kidney Injury Associate 23511138
Adenocarcinoma Associate 34269159, 34724890
Adenoma Associate 21249124, 23155391
Alcoholic Neuropathy Stimulate 17594598
Alopecia Areata Inhibit 23502337
Alopecia Areata Associate 26345899
Alzheimer Disease Associate 38178159, 40613333