Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	283237
Gene name Gene Name - the full gene name approved by the HGNC.	Tetratricopeptide repeat domain 9C
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	TTC9C
Synonyms (NCBI Gene) Gene synonyms aliases	-
Chromosome Chromosome number	11
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	11q12.3

Show/Hide all(202)

miRTarBase ID	miRNA	Experiments	Reference
MIRT001583	hsa-let-7b-5p	pSILAC	18668040
MIRT001583	hsa-let-7b-5p	Proteomics;Other	18668040
MIRT437518	hsa-miR-19b-3p	Immunoprecipitaion	22382630
MIRT675213	hsa-miR-3677-5p	HITS-CLIP	23824327
MIRT675212	hsa-miR-1228-3p	HITS-CLIP	23824327
MIRT635590	hsa-miR-383-3p	HITS-CLIP	23824327
MIRT675211	hsa-miR-342-3p	HITS-CLIP	23824327
MIRT675210	hsa-miR-4284	HITS-CLIP	23824327
MIRT675209	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT635587	hsa-miR-6827-5p	HITS-CLIP	23824327
MIRT635586	hsa-miR-6090	HITS-CLIP	23824327
MIRT635585	hsa-miR-4300	HITS-CLIP	23824327
MIRT635584	hsa-miR-5591-5p	HITS-CLIP	23824327
MIRT635583	hsa-miR-6726-5p	HITS-CLIP	23824327
MIRT635582	hsa-miR-920	HITS-CLIP	23824327
MIRT635581	hsa-miR-7977	HITS-CLIP	23824327
MIRT635580	hsa-miR-30c-1-3p	HITS-CLIP	23824327
MIRT635579	hsa-miR-30c-2-3p	HITS-CLIP	23824327
MIRT635578	hsa-miR-6788-5p	HITS-CLIP	23824327
MIRT635577	hsa-miR-1273h-5p	HITS-CLIP	23824327
MIRT635576	hsa-miR-30b-3p	HITS-CLIP	23824327
MIRT635575	hsa-miR-3689a-3p	HITS-CLIP	23824327
MIRT635574	hsa-miR-3689b-3p	HITS-CLIP	23824327
MIRT635573	hsa-miR-3689c	HITS-CLIP	23824327
MIRT635572	hsa-miR-6779-5p	HITS-CLIP	23824327
MIRT635571	hsa-miR-6780a-5p	HITS-CLIP	23824327
MIRT635570	hsa-miR-450a-1-3p	HITS-CLIP	23824327
MIRT635569	hsa-miR-3122	HITS-CLIP	23824327
MIRT635568	hsa-miR-3913-5p	HITS-CLIP	23824327
MIRT635567	hsa-miR-887-5p	HITS-CLIP	23824327
MIRT635566	hsa-miR-6513-5p	HITS-CLIP	23824327
MIRT635590	hsa-miR-383-3p	HITS-CLIP	23824327
MIRT635589	hsa-miR-4481	HITS-CLIP	23824327
MIRT635588	hsa-miR-4745-5p	HITS-CLIP	23824327
MIRT635587	hsa-miR-6827-5p	HITS-CLIP	23824327
MIRT635586	hsa-miR-6090	HITS-CLIP	23824327
MIRT635585	hsa-miR-4300	HITS-CLIP	23824327
MIRT635584	hsa-miR-5591-5p	HITS-CLIP	23824327
MIRT635583	hsa-miR-6726-5p	HITS-CLIP	23824327
MIRT635582	hsa-miR-920	HITS-CLIP	23824327
MIRT635581	hsa-miR-7977	HITS-CLIP	23824327
MIRT635580	hsa-miR-30c-1-3p	HITS-CLIP	23824327
MIRT635579	hsa-miR-30c-2-3p	HITS-CLIP	23824327
MIRT635578	hsa-miR-6788-5p	HITS-CLIP	23824327
MIRT635577	hsa-miR-1273h-5p	HITS-CLIP	23824327
MIRT635576	hsa-miR-30b-3p	HITS-CLIP	23824327
MIRT635575	hsa-miR-3689a-3p	HITS-CLIP	23824327
MIRT635574	hsa-miR-3689b-3p	HITS-CLIP	23824327
MIRT635573	hsa-miR-3689c	HITS-CLIP	23824327
MIRT635572	hsa-miR-6779-5p	HITS-CLIP	23824327
MIRT635571	hsa-miR-6780a-5p	HITS-CLIP	23824327
MIRT635570	hsa-miR-450a-1-3p	HITS-CLIP	23824327
MIRT635569	hsa-miR-3122	HITS-CLIP	23824327
MIRT635568	hsa-miR-3913-5p	HITS-CLIP	23824327
MIRT635567	hsa-miR-887-5p	HITS-CLIP	23824327
MIRT635566	hsa-miR-6513-5p	HITS-CLIP	23824327
MIRT635577	hsa-miR-1273h-5p	PAR-CLIP	26701625
MIRT635577	hsa-miR-1273h-5p	PAR-CLIP	26701625
MIRT635577	hsa-miR-1273h-5p	PAR-CLIP	26701625
MIRT635576	hsa-miR-30b-3p	PAR-CLIP	26701625
MIRT635576	hsa-miR-30b-3p	PAR-CLIP	26701625
MIRT635576	hsa-miR-30b-3p	PAR-CLIP	26701625
MIRT635575	hsa-miR-3689a-3p	PAR-CLIP	26701625
MIRT635575	hsa-miR-3689a-3p	PAR-CLIP	26701625
MIRT635575	hsa-miR-3689a-3p	PAR-CLIP	26701625
MIRT635574	hsa-miR-3689b-3p	PAR-CLIP	26701625
MIRT635574	hsa-miR-3689b-3p	PAR-CLIP	26701625
MIRT635574	hsa-miR-3689b-3p	PAR-CLIP	26701625
MIRT635573	hsa-miR-3689c	PAR-CLIP	26701625
MIRT635573	hsa-miR-3689c	PAR-CLIP	26701625
MIRT635573	hsa-miR-3689c	PAR-CLIP	26701625
MIRT635572	hsa-miR-6779-5p	PAR-CLIP	26701625
MIRT635572	hsa-miR-6779-5p	PAR-CLIP	26701625
MIRT635572	hsa-miR-6779-5p	PAR-CLIP	26701625
MIRT635571	hsa-miR-6780a-5p	PAR-CLIP	26701625
MIRT635571	hsa-miR-6780a-5p	PAR-CLIP	26701625
MIRT635571	hsa-miR-6780a-5p	PAR-CLIP	26701625
MIRT635577	hsa-miR-1273h-5p	PAR-CLIP	27292025
MIRT635576	hsa-miR-30b-3p	PAR-CLIP	27292025
MIRT635575	hsa-miR-3689a-3p	PAR-CLIP	27292025
MIRT635574	hsa-miR-3689b-3p	PAR-CLIP	27292025
MIRT635573	hsa-miR-3689c	PAR-CLIP	27292025
MIRT635572	hsa-miR-6779-5p	PAR-CLIP	27292025
MIRT635571	hsa-miR-6780a-5p	PAR-CLIP	27292025
MIRT675213	hsa-miR-3677-5p	HITS-CLIP	23824327
MIRT675212	hsa-miR-1228-3p	HITS-CLIP	23824327
MIRT635590	hsa-miR-383-3p	HITS-CLIP	23824327
MIRT675211	hsa-miR-342-3p	HITS-CLIP	23824327
MIRT675210	hsa-miR-4284	HITS-CLIP	23824327
MIRT675209	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT635587	hsa-miR-6827-5p	HITS-CLIP	23824327
MIRT635586	hsa-miR-6090	HITS-CLIP	23824327
MIRT635585	hsa-miR-4300	HITS-CLIP	23824327
MIRT635584	hsa-miR-5591-5p	HITS-CLIP	23824327
MIRT635583	hsa-miR-6726-5p	HITS-CLIP	23824327
MIRT635582	hsa-miR-920	HITS-CLIP	23824327
MIRT635581	hsa-miR-7977	HITS-CLIP	23824327
MIRT635580	hsa-miR-30c-1-3p	HITS-CLIP	23824327
MIRT635579	hsa-miR-30c-2-3p	HITS-CLIP	23824327
MIRT635578	hsa-miR-6788-5p	HITS-CLIP	23824327
MIRT635577	hsa-miR-1273h-5p	HITS-CLIP	23824327
MIRT635576	hsa-miR-30b-3p	HITS-CLIP	23824327
MIRT635575	hsa-miR-3689a-3p	HITS-CLIP	23824327
MIRT635574	hsa-miR-3689b-3p	HITS-CLIP	23824327
MIRT635573	hsa-miR-3689c	HITS-CLIP	23824327
MIRT635572	hsa-miR-6779-5p	HITS-CLIP	23824327
MIRT635571	hsa-miR-6780a-5p	HITS-CLIP	23824327
MIRT635570	hsa-miR-450a-1-3p	HITS-CLIP	23824327
MIRT635569	hsa-miR-3122	HITS-CLIP	23824327
MIRT635568	hsa-miR-3913-5p	HITS-CLIP	23824327
MIRT635567	hsa-miR-887-5p	HITS-CLIP	23824327
MIRT635566	hsa-miR-6513-5p	HITS-CLIP	23824327
MIRT635590	hsa-miR-383-3p	HITS-CLIP	23824327
MIRT635589	hsa-miR-4481	HITS-CLIP	23824327
MIRT635588	hsa-miR-4745-5p	HITS-CLIP	23824327
MIRT635587	hsa-miR-6827-5p	HITS-CLIP	23824327
MIRT635586	hsa-miR-6090	HITS-CLIP	23824327
MIRT635585	hsa-miR-4300	HITS-CLIP	23824327
MIRT635584	hsa-miR-5591-5p	HITS-CLIP	23824327
MIRT635583	hsa-miR-6726-5p	HITS-CLIP	23824327
MIRT635582	hsa-miR-920	HITS-CLIP	23824327
MIRT635581	hsa-miR-7977	HITS-CLIP	23824327
MIRT635580	hsa-miR-30c-1-3p	HITS-CLIP	23824327
MIRT635579	hsa-miR-30c-2-3p	HITS-CLIP	23824327
MIRT635578	hsa-miR-6788-5p	HITS-CLIP	23824327
MIRT635577	hsa-miR-1273h-5p	HITS-CLIP	23824327
MIRT635576	hsa-miR-30b-3p	HITS-CLIP	23824327
MIRT635575	hsa-miR-3689a-3p	HITS-CLIP	23824327
MIRT635574	hsa-miR-3689b-3p	HITS-CLIP	23824327
MIRT635573	hsa-miR-3689c	HITS-CLIP	23824327
MIRT635572	hsa-miR-6779-5p	HITS-CLIP	23824327
MIRT635571	hsa-miR-6780a-5p	HITS-CLIP	23824327
MIRT635570	hsa-miR-450a-1-3p	HITS-CLIP	23824327
MIRT635569	hsa-miR-3122	HITS-CLIP	23824327
MIRT635568	hsa-miR-3913-5p	HITS-CLIP	23824327
MIRT635567	hsa-miR-887-5p	HITS-CLIP	23824327
MIRT635566	hsa-miR-6513-5p	HITS-CLIP	23824327
MIRT1462016	hsa-miR-202	CLIP-seq
MIRT1462017	hsa-miR-24	CLIP-seq
MIRT1462018	hsa-miR-2467-5p	CLIP-seq
MIRT1462019	hsa-miR-296-3p	CLIP-seq
MIRT1462020	hsa-miR-3188	CLIP-seq
MIRT1462021	hsa-miR-3975	CLIP-seq
MIRT1462022	hsa-miR-4279	CLIP-seq
MIRT1462023	hsa-miR-4330	CLIP-seq
MIRT1462024	hsa-miR-4649-3p	CLIP-seq
MIRT1462025	hsa-miR-4663	CLIP-seq
MIRT1462026	hsa-miR-4668-3p	CLIP-seq
MIRT1462027	hsa-miR-485-5p	CLIP-seq
MIRT1462028	hsa-miR-628-5p	CLIP-seq
MIRT1462016	hsa-miR-202	CLIP-seq
MIRT2653002	hsa-miR-205	CLIP-seq
MIRT2653003	hsa-miR-2113	CLIP-seq
MIRT1462017	hsa-miR-24	CLIP-seq
MIRT1462018	hsa-miR-2467-5p	CLIP-seq
MIRT1462019	hsa-miR-296-3p	CLIP-seq
MIRT2653004	hsa-miR-298	CLIP-seq
MIRT1462020	hsa-miR-3188	CLIP-seq
MIRT2653005	hsa-miR-3606	CLIP-seq
MIRT2653006	hsa-miR-3944-5p	CLIP-seq
MIRT1462021	hsa-miR-3975	CLIP-seq
MIRT1462022	hsa-miR-4279	CLIP-seq
MIRT1462023	hsa-miR-4330	CLIP-seq
MIRT2653007	hsa-miR-4494	CLIP-seq
MIRT1462024	hsa-miR-4649-3p	CLIP-seq
MIRT1462025	hsa-miR-4663	CLIP-seq
MIRT1462026	hsa-miR-4668-3p	CLIP-seq
MIRT2653008	hsa-miR-4670-3p	CLIP-seq
MIRT2653009	hsa-miR-4753-3p	CLIP-seq
MIRT2653010	hsa-miR-4768-5p	CLIP-seq
MIRT2653011	hsa-miR-4775	CLIP-seq
MIRT1462027	hsa-miR-485-5p	CLIP-seq
MIRT2653012	hsa-miR-499a-5p	CLIP-seq
MIRT2653013	hsa-miR-548c-3p	CLIP-seq
MIRT2653014	hsa-miR-562	CLIP-seq
MIRT1462028	hsa-miR-628-5p	CLIP-seq
MIRT1462016	hsa-miR-202	CLIP-seq
MIRT2653002	hsa-miR-205	CLIP-seq
MIRT2653003	hsa-miR-2113	CLIP-seq
MIRT1462017	hsa-miR-24	CLIP-seq
MIRT1462018	hsa-miR-2467-5p	CLIP-seq
MIRT1462019	hsa-miR-296-3p	CLIP-seq
MIRT2653004	hsa-miR-298	CLIP-seq
MIRT1462020	hsa-miR-3188	CLIP-seq
MIRT2653005	hsa-miR-3606	CLIP-seq
MIRT2653006	hsa-miR-3944-5p	CLIP-seq
MIRT1462021	hsa-miR-3975	CLIP-seq
MIRT1462022	hsa-miR-4279	CLIP-seq
MIRT1462023	hsa-miR-4330	CLIP-seq
MIRT2653007	hsa-miR-4494	CLIP-seq
MIRT1462024	hsa-miR-4649-3p	CLIP-seq
MIRT1462025	hsa-miR-4663	CLIP-seq
MIRT1462026	hsa-miR-4668-3p	CLIP-seq
MIRT2653008	hsa-miR-4670-3p	CLIP-seq
MIRT2653009	hsa-miR-4753-3p	CLIP-seq
MIRT2653010	hsa-miR-4768-5p	CLIP-seq
MIRT2653011	hsa-miR-4775	CLIP-seq
MIRT1462027	hsa-miR-485-5p	CLIP-seq
MIRT2653012	hsa-miR-499a-5p	CLIP-seq
MIRT2653013	hsa-miR-548c-3p	CLIP-seq
MIRT2653014	hsa-miR-562	CLIP-seq
MIRT1462028	hsa-miR-628-5p	CLIP-seq

Show/Hide all(1)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	25416956, 26496610, 32296183

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Protein

UniProt ID

Q8N5M4

Protein name

Tetratricopeptide repeat protein 9C (TPR repeat protein 9C)

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF07719	TPR_2	108 → 141	Tetratricopeptide repeat	Repeat

Sequence

MEKRLQEAQLYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLPNLGPQGPALT
PEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQKVLERQPDNAKALYRAGVAFFH
LQDYDQARHYLLAAVNRQPKDANVRRYLQLTQSELSSYHRKEKQLYLGMFG

Sequence length

171

Interactions

View interactions

Show/Hide Causal Diseases (1)

Disease term	Disease name	dbSNP ID	References
Causal
Prostate cancer	Malignant neoplasm of prostate	rs121909139, rs121909140, rs121909141, rs121909142, rs121909143, rs606231169, rs606231170, rs137852584, rs137852578, rs137852580, rs137852581, rs137852582	17013881

Show/Hide Text Mining Associations (2)

Disease Name	Relationship Type	References
Associations from Text Mining
Carotid Stenosis	Associate	31589004
ST Elevation Myocardial Infarction	Associate	31589004

TTC9C (tetratricopeptide repeat domain 9C)