Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
27130
Gene name Gene Name - the full gene name approved by the HGNC.
Inversin
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
INVS
Synonyms (NCBI Gene) Gene synonyms aliases
INV, NPH2, NPHP2
Disease Acronyms (UniProt) Disease acronyms from UniProt database
NPHP2
Chromosome Chromosome number
9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q31.1
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a protein containing multiple ankyrin domains and two IQ calmodulin-binding domains. The encoded protein may function in renal tubular development and function, and in left-right axis determination. This protein interacts with nephrocyst
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs1052867 T>A,C Conflicting-interpretations-of-pathogenicity Missense variant, coding sequence variant, non coding transcript variant, synonymous variant
rs114056499 T>C Conflicting-interpretations-of-pathogenicity Coding sequence variant, non coding transcript variant, synonymous variant, 5 prime UTR variant
rs115042730 G>A,T Conflicting-interpretations-of-pathogenicity, uncertain-significance Coding sequence variant, non coding transcript variant, missense variant
rs115754570 G>A Conflicting-interpretations-of-pathogenicity Coding sequence variant, non coding transcript variant, missense variant
rs115937161 G>A Conflicting-interpretations-of-pathogenicity Coding sequence variant, non coding transcript variant, synonymous variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT531898 hsa-miR-511-3p HITS-CLIP 23313552
MIRT531897 hsa-miR-190a-5p HITS-CLIP 23313552
MIRT531896 hsa-miR-190b HITS-CLIP 23313552
MIRT531895 hsa-miR-92b-5p HITS-CLIP 23313552
MIRT531894 hsa-miR-3689a-5p HITS-CLIP 23313552
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 18371931, 21565611, 21602787
GO:0005516 Function Calmodulin binding IEA
GO:0005634 Component Nucleus IEA
GO:0005737 Component Cytoplasm IEA
GO:0005819 Component Spindle IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
243305 17870 ENSG00000119509
Protein
UniProt ID Q9Y283
Protein name Inversin (Inversion of embryo turning homolog) (Nephrocystin-2)
Protein function Required for normal renal development and establishment of left-right axis. Probably acts as a molecular switch between different Wnt signaling pathways. Inhibits the canonical Wnt pathway by targeting cytoplasmic disheveled (DVL1) for degradati
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF12796 Ank_2 18 111 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 85 179 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 173 252 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 246 317 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 311 387 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 394 486 Ankyrin repeats (3 copies) Repeat
PF12796 Ank_2 460 554 Ankyrin repeats (3 copies) Repeat
PF00612 IQ 557 576 IQ calmodulin-binding motif Motif
PF00612 IQ 917 937 IQ calmodulin-binding motif Motif
Tissue specificity TISSUE SPECIFICITY: Widely expressed. Strongly expressed in the primary cilia of renal tubular cells. {ECO:0000269|PubMed:11935322, ECO:0000269|PubMed:12872123}.
Sequence
MNKSENLLFAGSSLASQVHAAAVNGDKGALQRLIVGNSALKDKEDQFGRTPLMYCVLADR
LDCADALLKAGADVNKTDHSQRTA
LHLAAQKGNYRFMKLLLTRRANWMQKDLEEMTPLHL
TTRHRSPKCLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDV
EGKIPLHWAANHKDPSAVHTVRCILDAAPTESLLNWQDYEGRTPLHFAVADGNVTVVDVL
TSYESCNITSYDNLFRTPLHWAALLGHAQIVHLLLERNKSGTIPSDSQGATPLHYAAQSN
FAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLSLKSDIDINMADKYGGTA
LHAAALSGHVSTVKLLLENNAQVDATD
VMKHTPLFRACEMGHKDVIQTLIKGGARVDLVD
QDGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTP
LQCAAYGGYINCMAVLMENNA
DPNIQD
KEGRTALHWSCNNGYLDAIKLLLDFAAFPNQMENNEERYTPLDYALLGERHEVI
QFMLEHGALSIAAI
QDIAAFKIQAVYKGYKVRKAFRDRKNLLMKHEQLRKDAAAKKREEE
NKRKEAEQQKGRRSPDSCRPQALPCLPSTQDVPSRQSRAPSKQPPAGNVAQGPEPRDSRG
SPGGSLGGALQKEQHVSSDLQGTNSRRPNETAREHSKGQSACVHFRPNEGSDGSRHPGVP
SVEKSRGETAGDERCAKGKGFVKQPSCIRVAGPDEKGEDSRRAAASLPPHDSHWKPSRRH
DTEPKAKCAPQKRRTQELRGGRCSPAGSSRPGSARGEAVHAGQNPPHHRTPRNKVTQAKL
TGGLYSHLPQSTEELRSGARRLETSTLSEDFQVSKETDPAPGPLSGQSVNIDLLPVELRL
QIIQRERRRKELFRKKNKAAAVIQRAWRSYQLRKHLSHLRHMKQLGAGDVDRWRQESTAL
LLQVWRKELELKFPQTTAVSKAPKSPSKGTSGTKSTKHSVLKQIYGCSHEGKIHHPTRSV
KASSVLRLNSVSNLQCIHLLENSGRSKNFSYNLQSATQPKNKTKP
Sequence length 1065
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  
  Wnt signaling pathway  
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Cataract Cataract rs118203965, rs118203966, rs104893685, rs121908938, rs104894175, rs121909048, rs28937573, rs121909049, rs121909050, rs74315488, rs80358200, rs80358203, rs121434643, rs56141211, rs132630322
View all (150 more)
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Hypertension Hypertensive disease rs13306026
Kidney disease Chronic kidney disease stage 5 rs74315342, rs749740335, rs757649673, rs112417755, rs35138315
Unknown
Disease term Disease name Evidence References Source
Pulmonary hypoplasia Congenital hypoplasia of lung ClinVar
Senior-Loken Syndrome Senior-Loken syndrome GenCC
Preeclampsia Preeclampsia GWAS
Insomnia Insomnia GWAS
Associations from Text Mining
Disease Name Relationship Type References
Biliary Atresia Associate 34750413
Carcinoma Non Small Cell Lung Associate 28618971
Carcinoma Renal Cell Associate 39596188
Ciliopathies Associate 21068128, 23559409
Colorectal Neoplasms Associate 24349560
Down Syndrome Associate 8644714
Glomerulonephritis IGA Inhibit 20485333
Inflammation Associate 39596188
Kidney Diseases Associate 28618971
Kidney Diseases Cystic Associate 28618971