Gene Gene information from NCBI Gene database.
Entrez ID 26147
Gene name PHD finger protein 19
Gene symbol PHF19
Synonyms (NCBI Gene)
MTF2L1PCL3TDRD19B
Chromosome 9
Chromosome location 9q33.2
miRNA miRNA information provided by mirtarbase database.
326
miRTarBase ID miRNA Experiments Reference
MIRT002687 hsa-miR-124-3p Microarray 15685193
MIRT016585 hsa-miR-193b-3p Microarray 20304954
MIRT002687 hsa-miR-124-3p Microarray 15685193
MIRT002687 hsa-miR-124-3p Microarray 18668037
MIRT025582 hsa-miR-34a-5p Sequencing 20371350
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
21
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0003677 Function DNA binding IBA
GO:0003682 Function Chromatin binding IBA
GO:0005515 Function Protein binding IPI 23104054, 23160351, 23455924, 32296183, 32814053
GO:0005634 Component Nucleus IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
609740 24566 ENSG00000119403
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q5T6S3
Protein name PHD finger protein 19 (Polycomb-like protein 3) (hPCL3)
Protein function Polycomb group (PcG) protein that specifically binds histone H3 trimethylated at 'Lys-36' (H3K36me3) and recruits the PRC2 complex, thus enhancing PRC2 H3K27me3 methylation activity (PubMed:15563832, PubMed:18691976, PubMed:23104054, PubMed:2316
PDB 2E5Q , 4BD3 , 6NQ3 , 6WAU
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF18104 Tudor_2 43 78 Jumonji domain-containing protein 2A Tudor domain Domain
PF00628 PHD 98 151 PHD-finger Domain
PF14061 Mtf2_C 531 578 Polycomb-like MTF2 factor 2 Domain
Tissue specificity TISSUE SPECIFICITY: Isoform 1 is expressed in thymus, heart, lung and kidney. Isoform 2 is predominantly expressed in placenta, skeletal muscle and kidney, whereas isoform 1 is predominantly expressed in liver and peripheral blood leukocytes. Overexpresse
Sequence
MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
KRVSSSKQSCLVTFEDNS
KYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
LGYHQQCHIPIAGSADQPLLTPWFCRRCIFA
LAVRKGGALKKGAIARTLQAVKMVLSYQP
EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL
FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK
LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN
ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA
SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK
AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT
NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTT
PY
Sequence length 580
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Polycomb repressive complex   PRC2 methylates histones and DNA