Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	25992
Gene name Gene Name - the full gene name approved by the HGNC.	Sushi, nidogen and EGF like domains 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	SNED1
Synonyms (NCBI Gene) Gene synonyms aliases	IRE-BP1, SST3, Snep
Chromosome Chromosome number	2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	2q37.3

Show/Hide all(199)

miRTarBase ID	miRNA	Experiments	Reference
MIRT016924	hsa-miR-335-5p	Microarray	18185580
MIRT714433	hsa-miR-4753-5p	HITS-CLIP	19536157
MIRT714432	hsa-miR-590-3p	HITS-CLIP	19536157
MIRT714431	hsa-miR-135a-5p	HITS-CLIP	19536157
MIRT714430	hsa-miR-135b-5p	HITS-CLIP	19536157
MIRT714429	hsa-miR-103a-2-5p	HITS-CLIP	19536157
MIRT714428	hsa-miR-6815-3p	HITS-CLIP	19536157
MIRT714427	hsa-miR-124-3p	HITS-CLIP	19536157
MIRT714426	hsa-miR-506-3p	HITS-CLIP	19536157
MIRT714425	hsa-miR-4775	HITS-CLIP	19536157
MIRT714424	hsa-miR-5011-3p	HITS-CLIP	19536157
MIRT714423	hsa-miR-4666b	HITS-CLIP	19536157
MIRT714422	hsa-miR-450b-5p	HITS-CLIP	19536157
MIRT714421	hsa-miR-507	HITS-CLIP	19536157
MIRT714420	hsa-miR-557	HITS-CLIP	19536157
MIRT714419	hsa-miR-3680-3p	HITS-CLIP	19536157
MIRT714433	hsa-miR-4753-5p	HITS-CLIP	19536157
MIRT714432	hsa-miR-590-3p	HITS-CLIP	19536157
MIRT714431	hsa-miR-135a-5p	HITS-CLIP	19536157
MIRT714430	hsa-miR-135b-5p	HITS-CLIP	19536157
MIRT714429	hsa-miR-103a-2-5p	HITS-CLIP	19536157
MIRT714428	hsa-miR-6815-3p	HITS-CLIP	19536157
MIRT714427	hsa-miR-124-3p	HITS-CLIP	19536157
MIRT714426	hsa-miR-506-3p	HITS-CLIP	19536157
MIRT714425	hsa-miR-4775	HITS-CLIP	19536157
MIRT714424	hsa-miR-5011-3p	HITS-CLIP	19536157
MIRT714423	hsa-miR-4666b	HITS-CLIP	19536157
MIRT714422	hsa-miR-450b-5p	HITS-CLIP	19536157
MIRT714421	hsa-miR-507	HITS-CLIP	19536157
MIRT714420	hsa-miR-557	HITS-CLIP	19536157
MIRT714419	hsa-miR-3680-3p	HITS-CLIP	19536157
MIRT1375455	hsa-miR-145	CLIP-seq
MIRT1375456	hsa-miR-1909	CLIP-seq
MIRT1375457	hsa-miR-2276	CLIP-seq
MIRT1375458	hsa-miR-2278	CLIP-seq
MIRT1375459	hsa-miR-3180	CLIP-seq
MIRT1375460	hsa-miR-3180-3p	CLIP-seq
MIRT1375461	hsa-miR-3196	CLIP-seq
MIRT1375462	hsa-miR-346	CLIP-seq
MIRT1375463	hsa-miR-3613-3p	CLIP-seq
MIRT1375464	hsa-miR-3684	CLIP-seq
MIRT1375465	hsa-miR-4288	CLIP-seq
MIRT1375466	hsa-miR-4328	CLIP-seq
MIRT1375467	hsa-miR-4426	CLIP-seq
MIRT1375468	hsa-miR-452	CLIP-seq
MIRT1375469	hsa-miR-4647	CLIP-seq
MIRT1375470	hsa-miR-4662b	CLIP-seq
MIRT1375471	hsa-miR-4676-3p	CLIP-seq
MIRT1375472	hsa-miR-4711-3p	CLIP-seq
MIRT1375473	hsa-miR-4772-3p	CLIP-seq
MIRT1375474	hsa-miR-520d-5p	CLIP-seq
MIRT1375475	hsa-miR-524-5p	CLIP-seq
MIRT1375476	hsa-miR-618	CLIP-seq
MIRT1375477	hsa-miR-632	CLIP-seq
MIRT2111642	hsa-miR-2277-3p	CLIP-seq
MIRT2111643	hsa-miR-4271	CLIP-seq
MIRT2111644	hsa-miR-4420	CLIP-seq
MIRT1375468	hsa-miR-452	CLIP-seq
MIRT1375471	hsa-miR-4676-3p	CLIP-seq
MIRT2111645	hsa-miR-4725-3p	CLIP-seq
MIRT2334819	hsa-miR-1184	CLIP-seq
MIRT2334820	hsa-miR-1262	CLIP-seq
MIRT2334821	hsa-miR-1301	CLIP-seq
MIRT2334822	hsa-miR-3199	CLIP-seq
MIRT2334823	hsa-miR-345	CLIP-seq
MIRT2334824	hsa-miR-3591-5p	CLIP-seq
MIRT2334825	hsa-miR-3647-3p	CLIP-seq
MIRT2334826	hsa-miR-4255	CLIP-seq
MIRT2334827	hsa-miR-4453	CLIP-seq
MIRT2334828	hsa-miR-4513	CLIP-seq
MIRT2334829	hsa-miR-4538	CLIP-seq
MIRT2334830	hsa-miR-4539	CLIP-seq
MIRT2334831	hsa-miR-4652-5p	CLIP-seq
MIRT2334832	hsa-miR-4660	CLIP-seq
MIRT2334833	hsa-miR-4680-5p	CLIP-seq
MIRT2334834	hsa-miR-4701-3p	CLIP-seq
MIRT2334835	hsa-miR-4733-3p	CLIP-seq
MIRT2334836	hsa-miR-4740-5p	CLIP-seq
MIRT2334837	hsa-miR-5047	CLIP-seq
MIRT2334838	hsa-miR-508-5p	CLIP-seq
MIRT2460102	hsa-miR-1179	CLIP-seq
MIRT2460103	hsa-miR-141	CLIP-seq
MIRT2460104	hsa-miR-147	CLIP-seq
MIRT2460105	hsa-miR-200a	CLIP-seq
MIRT2460106	hsa-miR-3688-5p	CLIP-seq
MIRT2460107	hsa-miR-3911	CLIP-seq
MIRT2460108	hsa-miR-4263	CLIP-seq
MIRT2460109	hsa-miR-4457	CLIP-seq
MIRT2460110	hsa-miR-4731-3p	CLIP-seq
MIRT2460111	hsa-miR-4801	CLIP-seq
MIRT2460112	hsa-miR-642b	CLIP-seq
MIRT2460113	hsa-miR-644	CLIP-seq
MIRT2334819	hsa-miR-1184	CLIP-seq
MIRT2628972	hsa-miR-1204	CLIP-seq
MIRT2334820	hsa-miR-1262	CLIP-seq
MIRT2334821	hsa-miR-1301	CLIP-seq
MIRT2628973	hsa-miR-1913	CLIP-seq
MIRT2628974	hsa-miR-3157-5p	CLIP-seq
MIRT2628975	hsa-miR-3186-5p	CLIP-seq
MIRT2628976	hsa-miR-3187-3p	CLIP-seq
MIRT2628977	hsa-miR-324-3p	CLIP-seq
MIRT2628978	hsa-miR-34a	CLIP-seq
MIRT2628979	hsa-miR-34c-5p	CLIP-seq
MIRT2628980	hsa-miR-3616-3p	CLIP-seq
MIRT2628981	hsa-miR-3650	CLIP-seq
MIRT2628982	hsa-miR-3672	CLIP-seq
MIRT2628983	hsa-miR-3677-3p	CLIP-seq
MIRT2628984	hsa-miR-4302	CLIP-seq
MIRT2628985	hsa-miR-4313	CLIP-seq
MIRT2628986	hsa-miR-4438	CLIP-seq
MIRT2334827	hsa-miR-4453	CLIP-seq
MIRT2628987	hsa-miR-449a	CLIP-seq
MIRT2628988	hsa-miR-449b	CLIP-seq
MIRT2628989	hsa-miR-4529-5p	CLIP-seq
MIRT2334829	hsa-miR-4538	CLIP-seq
MIRT2628990	hsa-miR-4650-5p	CLIP-seq
MIRT2334832	hsa-miR-4660	CLIP-seq
MIRT2628991	hsa-miR-4690-3p	CLIP-seq
MIRT2334834	hsa-miR-4701-3p	CLIP-seq
MIRT2628992	hsa-miR-4710	CLIP-seq
MIRT2628993	hsa-miR-4721	CLIP-seq
MIRT2628994	hsa-miR-502-5p	CLIP-seq
MIRT2334837	hsa-miR-5047	CLIP-seq
MIRT2628995	hsa-miR-524-3p	CLIP-seq
MIRT2628996	hsa-miR-525-3p	CLIP-seq
MIRT2628997	hsa-miR-550a	CLIP-seq
MIRT2628998	hsa-miR-648	CLIP-seq
MIRT2628999	hsa-miR-938	CLIP-seq
MIRT2460102	hsa-miR-1179	CLIP-seq
MIRT2334819	hsa-miR-1184	CLIP-seq
MIRT2628972	hsa-miR-1204	CLIP-seq
MIRT2334820	hsa-miR-1262	CLIP-seq
MIRT2691626	hsa-miR-1266	CLIP-seq
MIRT2691627	hsa-miR-1273g	CLIP-seq
MIRT2334821	hsa-miR-1301	CLIP-seq
MIRT2691628	hsa-miR-133a	CLIP-seq
MIRT2691629	hsa-miR-133b	CLIP-seq
MIRT2460103	hsa-miR-141	CLIP-seq
MIRT2460104	hsa-miR-147	CLIP-seq
MIRT1375456	hsa-miR-1909	CLIP-seq
MIRT2691630	hsa-miR-1912	CLIP-seq
MIRT2460105	hsa-miR-200a	CLIP-seq
MIRT2691631	hsa-miR-3127-5p	CLIP-seq
MIRT2691632	hsa-miR-3130-5p	CLIP-seq
MIRT2628975	hsa-miR-3186-5p	CLIP-seq
MIRT2628976	hsa-miR-3187-3p	CLIP-seq
MIRT2628978	hsa-miR-34a	CLIP-seq
MIRT2628979	hsa-miR-34c-5p	CLIP-seq
MIRT2691633	hsa-miR-3613-5p	CLIP-seq
MIRT2628980	hsa-miR-3616-3p	CLIP-seq
MIRT2334825	hsa-miR-3647-3p	CLIP-seq
MIRT2628981	hsa-miR-3650	CLIP-seq
MIRT2691634	hsa-miR-3664-3p	CLIP-seq
MIRT2628982	hsa-miR-3672	CLIP-seq
MIRT2628983	hsa-miR-3677-3p	CLIP-seq
MIRT2460107	hsa-miR-3911	CLIP-seq
MIRT2691635	hsa-miR-3929	CLIP-seq
MIRT2460108	hsa-miR-4263	CLIP-seq
MIRT2691636	hsa-miR-4267	CLIP-seq
MIRT2691637	hsa-miR-4281	CLIP-seq
MIRT2628984	hsa-miR-4302	CLIP-seq
MIRT2691638	hsa-miR-4419b	CLIP-seq
MIRT2691639	hsa-miR-4427	CLIP-seq
MIRT2628986	hsa-miR-4438	CLIP-seq
MIRT2334827	hsa-miR-4453	CLIP-seq
MIRT2460109	hsa-miR-4457	CLIP-seq
MIRT2691640	hsa-miR-4478	CLIP-seq
MIRT2691641	hsa-miR-4482	CLIP-seq
MIRT2628987	hsa-miR-449a	CLIP-seq
MIRT2628988	hsa-miR-449b	CLIP-seq
MIRT2691642	hsa-miR-4518	CLIP-seq
MIRT2628989	hsa-miR-4529-5p	CLIP-seq
MIRT2334829	hsa-miR-4538	CLIP-seq
MIRT2628990	hsa-miR-4650-5p	CLIP-seq
MIRT2334832	hsa-miR-4660	CLIP-seq
MIRT2691643	hsa-miR-4680-3p	CLIP-seq
MIRT2691644	hsa-miR-4687-3p	CLIP-seq
MIRT2334834	hsa-miR-4701-3p	CLIP-seq
MIRT2628992	hsa-miR-4710	CLIP-seq
MIRT2691645	hsa-miR-4715-3p	CLIP-seq
MIRT2628993	hsa-miR-4721	CLIP-seq
MIRT2460110	hsa-miR-4731-3p	CLIP-seq
MIRT2691646	hsa-miR-4759	CLIP-seq
MIRT2460111	hsa-miR-4801	CLIP-seq
MIRT2628994	hsa-miR-502-5p	CLIP-seq
MIRT2334837	hsa-miR-5047	CLIP-seq
MIRT2334838	hsa-miR-508-5p	CLIP-seq
MIRT2691647	hsa-miR-513a-5p	CLIP-seq
MIRT2628995	hsa-miR-524-3p	CLIP-seq
MIRT2628996	hsa-miR-525-3p	CLIP-seq
MIRT2628997	hsa-miR-550a	CLIP-seq
MIRT2691648	hsa-miR-552	CLIP-seq
MIRT2691649	hsa-miR-587	CLIP-seq
MIRT2460112	hsa-miR-642b	CLIP-seq
MIRT2460113	hsa-miR-644	CLIP-seq
MIRT2691650	hsa-miR-645	CLIP-seq
MIRT2628998	hsa-miR-648	CLIP-seq
MIRT2691651	hsa-miR-766	CLIP-seq
MIRT2691652	hsa-miR-876-3p	CLIP-seq

Show/Hide all(6)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005112	Function	Notch binding	IBA
GO:0005509	Function	Calcium ion binding	IEA
GO:0005576	Component	Extracellular region	IEA
GO:0007160	Process	Cell-matrix adhesion	IEA
GO:0031012	Component	Extracellular matrix	IDA	33724335
GO:0031012	Component	Extracellular matrix	IEA

MIM	HGNC	e!Ensembl
616634	24696	ENSG00000162804

Protein

UniProt ID

Q8TER0

Protein name

Sushi, nidogen and EGF-like domain-containing protein 1 (Insulin-responsive sequence DNA-binding protein 1) (IRE-BP1)

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF06119	NIDO	168 → 257	Nidogen-like	Family
PF00008	EGF	272 → 307	EGF-like domain	Domain
PF00008	EGF	315 → 345	EGF-like domain	Domain
PF12661	hEGF	358 → 379	Human growth factor-like EGF	Domain
PF00008	EGF	391 → 421	EGF-like domain	Domain
PF00008	EGF	433 → 463	EGF-like domain	Domain
PF12661	hEGF	474 → 494	Human growth factor-like EGF	Domain
PF00008	EGF	545 → 575	EGF-like domain	Domain
PF00008	EGF	584 → 614	EGF-like domain	Domain
PF00008	EGF	623 → 653	EGF-like domain	Domain
PF12661	hEGF	666 → 687	Human growth factor-like EGF	Domain
PF00008	EGF	757 → 787	EGF-like domain	Domain
PF00008	EGF	795 → 825	EGF-like domain	Domain
PF00008	EGF	833 → 863	EGF-like domain	Domain
PF00041	fn3	908 → 991	Fibronectin type III domain	Domain
PF00041	fn3	1005 → 1088	Fibronectin type III domain	Domain
PF00041	fn3	1105 → 1186	Fibronectin type III domain	Domain
PF00008	EGF	1311 → 1341	EGF-like domain	Domain

Sequence

MRHGVAWALLVAAALGLGARGVRGAVALADFYPFGAERGDAVTPKQDDGGSGLRPLSVPF
PFFGAEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDPAMLRRATEDVRHYFPELLDFNATWVFVATWYRVTFFGGSSSSPVNTFQTVLITDGK
LSFTIFNYESIVWTTGTHASSGGNATGLGGIAAQAGFNAGDGQRYFSIPGSRTADMAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLALRPCLNGGKCIDDCVTGNPSYTCSCL
SGFTGRRCHLDVNECASQPCQNGGTCTHGINSFRCQCPAGFGGPTCETAQSPCDTKECQH
GGQCQVENGSAVCVCQAGYTGAACEMDVDDCSPDPCLNGGSCVDLVGNYTCLCAEPFKGL
RCETGDHPVPDACLSAPCHNGGTCVDADQGYVCECPEGFMGLDCRERVPDDCECRNGGRC
LGANTTLCQCPLGFFGLLCEFEITAMPCNMNTQCPDGGYCMEHGGSYLCVCHTDHNASHS
LPSPCDSDPCFNGGSCDAHDDSYTCECPRGFHGKHCEKARPHLCSSGPCRNGGTCKEAGG
EYHCSCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCVNGGTCEDRDTDFFCHCQAGYMGRRCQAEVDCGPPEEVKHATLRFNGTRLGAVA
LYACDRGYSLSAPSRIRVCQPHGVWSEPPQCLEIDECRSQPCLHGGSCQDRVAGYLCLCS
TGYEGAHCELERDECRAHPCRNGGSCRNLPGAYVCRCPAGFVGVHCETEVDACDSSPCQH
GGRCESGGGAYLCVCPESFFGYHCETVSDPCFSSPCGGRGYCLASNGSHSCTCKVGYTGE
DCAKELFPPTALKMERVEESGVSISWNPPNGPAARQMLDGYAVTYVSSDGSYRRTDFVDR
TRSSHQLQALAAGRAYNISVFSVKRNSNNKNDISRPAVLLARTRPRPVEGFEVTNVTAST
ISVQWALHRIRHATVSGVRVSIRHPEALRDQATDVDRSVDRFTFRALLPGKRYTIQLTTL
SGLRGEEHPTESLATAPTHVWTRPLPPANLTAARVTATSAHVVWDAPTPGSLLEAYVINV
TTSQSTKSRYVPNGKLASYTVRDLLPGRRYQLSVIAVQSTELGPQHSEPAHLYIITSPRD
GADRRWHQGGHHPRVLKNRPPPARLPELRLLNDHSAPETPTQPPRFSELVDGRGRVSARF
GGSPSKAATVRSQPTASAQLENMEEAPKRVSLALQLPEHGSKDIGNVPGNCSENPCQNGG
TCVPGADAHSCDCGPGFKGRRCELACIKVSRPCTRLFSETKAFPVWEGGVCHHVYKRVYR
VHQDICFKESCESTSLKKTPNRKQSKSQTLEKS

Sequence length

1413

Interactions

View interactions

SNED1 (sushi, nidogen and EGF like domains 1)