Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
25978
Gene name Gene Name - the full gene name approved by the HGNC.
Charged multivesicular body protein 2B
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CHMP2B
Synonyms (NCBI Gene) Gene synonyms aliases
ALS17, CHMP2.5, DMT1, FTDALS7, VPS2-2, VPS2B
Disease Acronyms (UniProt) Disease acronyms from UniProt database
FTDALS7
Chromosome Chromosome number
3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
3p11.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a component of the heteromeric ESCRT-III complex (Endosomal Sorting Complex Required for Transport III) that functions in the recycling or degradation of cell surface receptors. ESCRT-III functions in the concentration and invagination o
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs63750355 C>T Pathogenic, not-provided Coding sequence variant, stop gained
rs63750652 G>A,C Pathogenic, not-provided Splice acceptor variant
rs63750653 G>T Pathogenic, not-provided Coding sequence variant, missense variant
rs63751048 C>T Pathogenic, not-provided Coding sequence variant, stop gained
rs63751126 A>C,T Pathogenic, not-provided Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT021402 hsa-miR-9-5p Western blot;qRT-PCR 20362537
MIRT022727 hsa-miR-124-3p qRT-PCR 20362537
MIRT210750 hsa-miR-181a-5p PAR-CLIP 21572407
MIRT210751 hsa-miR-181b-5p PAR-CLIP 21572407
MIRT210752 hsa-miR-181c-5p PAR-CLIP 21572407
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000815 Component ESCRT III complex IBA 21873635
GO:0000815 Component ESCRT III complex IDA 24878737
GO:0000815 Component ESCRT III complex TAS 20588296, 21118109
GO:0005515 Function Protein binding IPI 16730941, 17683935, 21044950, 21975012, 22046132, 23051622, 26496610
GO:0005737 Component Cytoplasm IDA 24878737, 25468996
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
609512 24537 ENSG00000083937
Protein
UniProt ID Q9UQN3
Protein name Charged multivesicular body protein 2b (CHMP2.5) (Chromatin-modifying protein 2b) (CHMP2b) (Vacuolar protein sorting-associated protein 2-2) (Vps2-2) (hVps2-2)
Protein function Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (IL
PDB 2JQK
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03357 Snf7 16 186 Snf7 Family
Tissue specificity TISSUE SPECIFICITY: Widely expressed. Expressed in brain, heart, skeletal muscle, spleen, kidney, liver, small intestine, pancreas, lung, placenta and leukocytes. In brain, it is expressed in cerebellum, cerebral cortex, medulla, spinal cord, occipital lo
Sequence
Sequence length 213
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Endocytosis
Necroptosis
Amyotrophic lateral sclerosis
Pathways of neurodegeneration - multiple diseases
  Budding and maturation of HIV virion
Macroautophagy
Endosomal Sorting Complex Required For Transport (ESCRT)
HCMV Late Events
Sealing of the nuclear envelope (NE) by ESCRT-III
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Amyotrophic lateral sclerosis Amyotrophic Lateral Sclerosis, Amyotrophic Lateral Sclerosis, Guam Form, Amyotrophic Lateral Sclerosis, Chmp2B-Related, Amyotrophic lateral sclerosis rs267607084, rs312262720, rs312262752, rs121908287, rs121908288, rs29001584, rs28941475, rs121434378, rs386134173, rs386134174, rs80356730, rs80356727, rs4884357, rs80356717, rs80356733
View all (171 more)
16807408, 20352044, 23155438, 17956895
Apraxia Apraxias rs121908377, rs121908378, rs1135401820, rs1178491246, rs1584969672
Frontotemporal dementia Frontotemporal dementia, Frontotemporal Lobar Degeneration, FRONTOTEMPORAL DEMENTIA, CHROMOSOME 3-LINKED rs63751273, rs63750376, rs63750424, rs63750972, rs1568327531, rs63750570, rs63750756, rs63751165, rs63750512, rs63751438, rs63750912, rs63750711, rs63750635, rs63750349, rs63750092
View all (31 more)
17956895, 16041373, 20352044
Parkinson disease Parkinsonian Disorders rs33939927, rs35801418, rs34805604, rs35870237, rs34995376, rs74315355, rs28940284, rs74315356, rs74315357, rs28940285, rs730880302, rs750664040, rs74315359, rs74315360, rs45539432
View all (84 more)
Unknown
Disease term Disease name Evidence References Source
Mental depression Depressive disorder ClinVar
Amyotrophic Lateral Sclerosis frontotemporal dementia and/or amyotrophic lateral sclerosis 7, amyotrophic lateral sclerosis type 17 GenCC
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Associate 29486463
Amyotrophic Lateral Sclerosis Associate 17984323, 33770234, 40316175
Chromosome 3 Linked Frontotemporal Dementia Associate 20223751, 28216144, 32928252, 37543250, 40316175
Congenital Hereditary and Neonatal Diseases and Abnormalities Associate 29486463
Dementia Associate 35120450
Diabetes Mellitus Type 2 Associate 37538791
Frontotemporal Dementia Associate 17984323, 20223751, 20592581, 24709683, 27632209, 28216144, 29237796, 29476165, 31578281, 33626531, 37635943, 40316175
Frontotemporal Lobar Degeneration Associate 18166610, 20490813, 40316175
Glioblastoma Associate 34427071
Idiopathic Noncirrhotic Portal Hypertension Associate 19307463