Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Transcription factors Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	25780
Gene name Gene Name - the full gene name approved by the HGNC.	RAS guanyl releasing protein 3
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	RASGRP3
Synonyms (NCBI Gene) Gene synonyms aliases	GRP3
Chromosome Chromosome number	2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	2p22.3
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene is a guanine nucleotide exchange factor that activates the oncogenes HRAS and RAP1A. Defects in this gene have been associated with systemic lupus erythematosus and several cancers. [provided by RefSeq, Mar 2017]

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miRTarBase ID	miRNA	Experiments	Reference
MIRT030769	hsa-miR-21-5p	Microarray	18591254
MIRT662171	hsa-miR-4438	HITS-CLIP	23824327
MIRT654441	hsa-miR-5588-3p	HITS-CLIP	23824327
MIRT662170	hsa-miR-3155a	HITS-CLIP	23824327
MIRT662169	hsa-miR-3155b	HITS-CLIP	23824327
MIRT662168	hsa-miR-484	HITS-CLIP	23824327
MIRT654440	hsa-miR-455-3p	HITS-CLIP	23824327
MIRT654439	hsa-miR-1910-5p	HITS-CLIP	23824327
MIRT654438	hsa-miR-4267	HITS-CLIP	23824327
MIRT654437	hsa-miR-138-2-3p	HITS-CLIP	23824327
MIRT654436	hsa-miR-4264	HITS-CLIP	23824327
MIRT654435	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT654434	hsa-miR-7977	HITS-CLIP	23824327
MIRT654433	hsa-miR-30a-3p	HITS-CLIP	23824327
MIRT654432	hsa-miR-30d-3p	HITS-CLIP	23824327
MIRT654431	hsa-miR-30e-3p	HITS-CLIP	23824327
MIRT654430	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT654441	hsa-miR-5588-3p	HITS-CLIP	23824327
MIRT654440	hsa-miR-455-3p	HITS-CLIP	23824327
MIRT654439	hsa-miR-1910-5p	HITS-CLIP	23824327
MIRT654438	hsa-miR-4267	HITS-CLIP	23824327
MIRT654437	hsa-miR-138-2-3p	HITS-CLIP	23824327
MIRT654436	hsa-miR-4264	HITS-CLIP	23824327
MIRT654435	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT654434	hsa-miR-7977	HITS-CLIP	23824327
MIRT654433	hsa-miR-30a-3p	HITS-CLIP	23824327
MIRT654432	hsa-miR-30d-3p	HITS-CLIP	23824327
MIRT654431	hsa-miR-30e-3p	HITS-CLIP	23824327
MIRT654430	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT483005	hsa-miR-708-3p	PAR-CLIP	23592263
MIRT483004	hsa-miR-6783-5p	PAR-CLIP	23592263
MIRT483003	hsa-miR-6782-5p	PAR-CLIP	23592263
MIRT483002	hsa-miR-766-5p	PAR-CLIP	23592263
MIRT483001	hsa-miR-765	PAR-CLIP	23592263
MIRT482999	hsa-miR-7106-5p	PAR-CLIP	23592263
MIRT483000	hsa-miR-6825-5p	PAR-CLIP	23592263
MIRT482998	hsa-miR-6824-5p	PAR-CLIP	23592263
MIRT439813	ebv-miR-BART10-3p	HITS-CLIP	22473208
MIRT439812	ebv-miR-BART7-3p	HITS-CLIP	22473208
MIRT439813	ebv-miR-BART10-3p	HITS-CLIP	22473208
MIRT439812	ebv-miR-BART7-3p	HITS-CLIP	22473208
MIRT159273	hsa-miR-26a-5p	HITS-CLIP	22473208
MIRT159274	hsa-miR-26b-5p	HITS-CLIP	22473208
MIRT159242	hsa-miR-30a-5p	HITS-CLIP	22473208
MIRT159246	hsa-miR-30b-5p	HITS-CLIP	22473208
MIRT159243	hsa-miR-30c-5p	HITS-CLIP	22473208
MIRT159244	hsa-miR-30d-5p	HITS-CLIP	22473208
MIRT159250	hsa-miR-30e-5p	HITS-CLIP	22473208
MIRT662171	hsa-miR-4438	HITS-CLIP	23824327
MIRT654441	hsa-miR-5588-3p	HITS-CLIP	23824327
MIRT662170	hsa-miR-3155a	HITS-CLIP	23824327
MIRT662169	hsa-miR-3155b	HITS-CLIP	23824327
MIRT662168	hsa-miR-484	HITS-CLIP	23824327
MIRT654440	hsa-miR-455-3p	HITS-CLIP	23824327
MIRT654439	hsa-miR-1910-5p	HITS-CLIP	23824327
MIRT654438	hsa-miR-4267	HITS-CLIP	23824327
MIRT654437	hsa-miR-138-2-3p	HITS-CLIP	23824327
MIRT654436	hsa-miR-4264	HITS-CLIP	23824327
MIRT654435	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT654434	hsa-miR-7977	HITS-CLIP	23824327
MIRT654433	hsa-miR-30a-3p	HITS-CLIP	23824327
MIRT654432	hsa-miR-30d-3p	HITS-CLIP	23824327
MIRT654431	hsa-miR-30e-3p	HITS-CLIP	23824327
MIRT654430	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT654441	hsa-miR-5588-3p	HITS-CLIP	23824327
MIRT654440	hsa-miR-455-3p	HITS-CLIP	23824327
MIRT654439	hsa-miR-1910-5p	HITS-CLIP	23824327
MIRT654438	hsa-miR-4267	HITS-CLIP	23824327
MIRT654437	hsa-miR-138-2-3p	HITS-CLIP	23824327
MIRT654436	hsa-miR-4264	HITS-CLIP	23824327
MIRT654435	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT654434	hsa-miR-7977	HITS-CLIP	23824327
MIRT654433	hsa-miR-30a-3p	HITS-CLIP	23824327
MIRT654432	hsa-miR-30d-3p	HITS-CLIP	23824327
MIRT654431	hsa-miR-30e-3p	HITS-CLIP	23824327
MIRT654430	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT483005	hsa-miR-708-3p	PAR-CLIP	23592263
MIRT483004	hsa-miR-6783-5p	PAR-CLIP	23592263
MIRT483003	hsa-miR-6782-5p	PAR-CLIP	23592263
MIRT483002	hsa-miR-766-5p	PAR-CLIP	23592263
MIRT483001	hsa-miR-765	PAR-CLIP	23592263
MIRT482999	hsa-miR-7106-5p	PAR-CLIP	23592263
MIRT483000	hsa-miR-6825-5p	PAR-CLIP	23592263
MIRT482998	hsa-miR-6824-5p	PAR-CLIP	23592263
MIRT1292417	hsa-miR-3064-3p	CLIP-seq
MIRT1292418	hsa-miR-31	CLIP-seq
MIRT1292419	hsa-miR-3688-5p	CLIP-seq
MIRT1292420	hsa-miR-4722-3p	CLIP-seq
MIRT1292421	hsa-miR-4796-3p	CLIP-seq
MIRT1292422	hsa-miR-520g	CLIP-seq
MIRT1292423	hsa-miR-520h	CLIP-seq
MIRT1292424	hsa-miR-561	CLIP-seq
MIRT1292425	hsa-miR-4494	CLIP-seq
MIRT1292426	hsa-miR-4499	CLIP-seq
MIRT1292427	hsa-miR-4682	CLIP-seq
MIRT2086894	hsa-miR-4659a-3p	CLIP-seq
MIRT2086895	hsa-miR-4659b-3p	CLIP-seq
MIRT2311801	hsa-miR-3065-5p	CLIP-seq
MIRT2311802	hsa-miR-4724-5p	CLIP-seq
MIRT2311803	hsa-miR-4773	CLIP-seq
MIRT2311804	hsa-miR-888	CLIP-seq
MIRT2608212	hsa-miR-103b	CLIP-seq
MIRT2608213	hsa-miR-134	CLIP-seq
MIRT2608214	hsa-miR-3118	CLIP-seq
MIRT2608215	hsa-miR-3164	CLIP-seq
MIRT2608216	hsa-miR-487a	CLIP-seq
MIRT2608212	hsa-miR-103b	CLIP-seq
MIRT2608213	hsa-miR-134	CLIP-seq
MIRT2608214	hsa-miR-3118	CLIP-seq
MIRT2608215	hsa-miR-3164	CLIP-seq
MIRT2608216	hsa-miR-487a	CLIP-seq

Transcription factors

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Transcription factor	Regulation	Reference
CREB5	Repression	21132541

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GO ID	Ontology	Definition	Evidence	Reference
GO:0000165	Process	MAPK cascade	NAS	10934204
GO:0000165	Process	MAPK cascade	TAS
GO:0005085	Function	Guanyl-nucleotide exchange factor activity	TAS
GO:0005096	Function	GTPase activator activity	IDA	10934204
GO:0005509	Function	Calcium ion binding	NAS	10934204
GO:0005515	Function	Protein binding	IPI	25416956, 32296183
GO:0005886	Component	Plasma membrane	TAS
GO:0005887	Component	Integral component of plasma membrane	NAS	10934204
GO:0007264	Process	Small GTPase mediated signal transduction	TAS	10934204
GO:0007265	Process	Ras protein signal transduction	IEA
GO:0019900	Function	Kinase binding	IEA
GO:0019992	Function	Diacylglycerol binding	NAS	10934204
GO:0031267	Function	Small GTPase binding	IEA
GO:0032045	Component	Guanyl-nucleotide exchange factor complex	IEA
GO:0043547	Process	Positive regulation of GTPase activity	IEA
GO:0048471	Component	Perinuclear region of cytoplasm	IEA

MIM	HGNC	e!Ensembl
609531	14545	ENSG00000152689

Protein

UniProt ID

Q8IV61

Protein name

Ras guanyl-releasing protein 3 (Calcium and DAG-regulated guanine nucleotide exchange factor III) (Guanine nucleotide exchange factor for Rap1)

Protein function

Guanine nucleotide exchange factor (GEF) for Ras and Rap1.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00617	RasGEF	155 → 331	RasGEF domain	Family
PF00130	C1_1	495 → 546	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain

Sequence

MGSSGLGKAATLDELLCTCIEMFDDNGELDNSYLPRIVLLMHRWYLSSTELAEKLLCMYR
NATGESCNEFRLKICYFMRYWILKFPAEFNLDLGLIRMTEEFREVASQLGYEKHVSLIDI
SSIPSYDWMRRVTQRKKVSKKGKACLLFDHLEPIELAEHLTFLEHKSFRRISFTDYQSYV
IHGCLENNPTLERSIALFNGISKWVQLMVLSKPTPQQRAEVITKFINVAKKLLQLKNFNT
LMAVVGGLSHSSISRLKETHSHLSSEVTKNWNEMTELVSSNGNYCNYRKAFADCDGFKIP
ILGVHLKDLIAVHVIFPDWTEENKVNIVKMHQLSVTLSELVSLQNASHHLEPNMDLINLL
TLSLDLYHTEDDIYKLSLVLEPRNSKSQPTSPTTPNKPVVPLEWALGVMPKPDPTVINKH
IRKLVESVFRNYDHDHDGYISQEDFESIAANFPFLDSFCVLDKDQDGLISKDEMMAYFLR
AKSQLHCKMGPGFIHNFQEMTYLKPTFCEHCAGFLWGIIKQGYKCKDCGANCHKQCKDLL
VLACRRFARAPSLSSGHGSLPGSPSLPPAQDEVFEFPGVTAGHRDLDSRAITLVTGSSRK
ISVRLQRATTSQATQTEPVWSEAGWGDSGSHTFPKMKSKFHDKAAKDKGFAKWENEKPRV
HAGVDVVDRGTEFELDQDEGEETRQDGEDG

Sequence length

690

Interactions

View interactions

	KEGG		Reactome
	MAPK signaling pathway Ras signaling pathway Rap1 signaling pathway B cell receptor signaling pathway Pathways in cancer		Activation of RAS in B cells RAF/MAP kinase cascade

Show/Hide Causal Diseases (2)

Disease term	Disease name	dbSNP ID	References
Causal
Leukemia	Leukemia, Myelocytic, Acute	rs121909646, rs121913488, rs587776834, rs752746786, rs869312821, rs767454740, rs1554564297	27903959
Lip and oral cavity carcinoma	Lip and Oral Cavity Carcinoma	rs121913388, rs121912651, rs11540652, rs28934573, rs28934578, rs28933406, rs104894229, rs104894230, rs121913273, rs104894228, rs587778720, rs55832599, rs121913344, rs587782705, rs104894226 View all (9 more)

Show/Hide Unknown Diseases (2)

Disease term	Disease name	Source
Unknown
Systemic lupus erythematosus	Systemic lupus erythematosus	GWAS
Sjogren-Larsson Syndrome	Sjogren-Larsson Syndrome	GWAS

Show/Hide Text Mining Associations (15)

Disease Name	Relationship Type	References
Associations from Text Mining
Alcoholism	Associate	24890784
Arthritis Rheumatoid	Stimulate	26714738
Colorectal Neoplasms	Associate	37013584
Diabetes Mellitus	Associate	19421330
Diabetes Mellitus Type 1	Associate	20736230
Glioblastoma	Associate	25682201
Glioma	Associate	25682201
Hypertension	Associate	19421330
Lupus Erythematosus Systemic	Associate	20736230
Medulloblastoma	Associate	28545823
Multiple Myeloma	Associate	37014739
Neoplasms	Associate	20876802, 24418912
Prostatic Neoplasms	Associate	20876802, 24418912, 25189356
Prostatitis	Stimulate	20876802
Stomach Neoplasms	Associate	30106143

RASGRP3 (RAS guanyl releasing protein 3)