Gene Gene information from NCBI Gene database.
Entrez ID 2539
Gene name Glucose-6-phosphate dehydrogenase
Gene symbol G6PD
Synonyms (NCBI Gene)
CNSHA1G6PD1
Chromosome X
Chromosome location Xq28
Summary This gene encodes glucose-6-phosphate dehydrogenase. This protein is a cytosolic enzyme encoded by a housekeeping X-linked gene whose main function is to produce NADPH, a key electron donor in the defense against oxidizing agents and in reductive biosynth
SNPs SNP information provided by dbSNP.
50
SNP ID Visualize variation Clinical significance Consequence
rs1050828 C>T Pathogenic, other, not-provided, conflicting-interpretations-of-pathogenicity, uncertain-significance, drug-response Coding sequence variant, missense variant
rs1050829 T>A,C Pathogenic, other, conflicting-interpretations-of-pathogenicity, likely-benign, benign Coding sequence variant, missense variant
rs2515904 G>C Conflicting-interpretations-of-pathogenicity Intron variant
rs5030868 G>A Pathogenic, other, likely-pathogenic, pathogenic-likely-pathogenic, uncertain-significance Coding sequence variant, missense variant
rs5030869 C>A,T Pathogenic, other Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
213
miRTarBase ID miRNA Experiments Reference
MIRT002956 hsa-miR-1-3p pSILAC 18668040
MIRT002956 hsa-miR-1-3p Luciferase reporter assay 14697198
MIRT018235 hsa-miR-335-5p Microarray 18185580
MIRT002956 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT002956 hsa-miR-1-3p Proteomics 18668040
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
CREM Repression 17273168
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
53
GO ID Ontology Definition Evidence Reference
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IBA
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IDA 15858258, 35122041, 38066190
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IEA
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IMP 743300, 2420826, 5643703
GO:0005515 Function Protein binding IPI 21157431, 24769394, 35122041
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
305900 4057 ENSG00000160211
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P11413
Protein name Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
Protein function Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. The main function of this enzyme is to provide reducing power (NADPH) and pentose ph
PDB 1QKI , 2BH9 , 2BHL , 5UKW , 6E07 , 6E08 , 6JYU , 6VA0 , 6VA7 , 6VA8 , 6VA9 , 6VAQ , 7SEH , 7SEI , 7SNF , 7SNG , 7SNH , 7SNI , 7TOE , 7TOF , 7UAG , 7UAL , 7UC2 , 7ZVD
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00479 G6PD_N 35 210 Glucose-6-phosphate dehydrogenase, NAD binding domain Domain
PF02781 G6PD_C 212 509 Glucose-6-phosphate dehydrogenase, C-terminal domain Domain
Tissue specificity TISSUE SPECIFICITY: Isoform Long is found in lymphoblasts, granulocytes and sperm.
Sequence
Sequence length 515
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Pentose phosphate pathway
Glutathione metabolism
Metabolic pathways
Carbon metabolism
Central carbon metabolism in cancer
Diabetic cardiomyopathy
  TP53 Regulates Metabolic Genes
Pentose phosphate pathway
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
1002
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Anemia, nonspherocytic hemolytic, due to G6PD deficiency Likely pathogenic; Pathogenic rs2148328873, rs1557229854, rs979416826, rs2148331380, rs2148331875, rs2148328852, rs2148330566, rs137852324, rs2148328604, rs782315572, rs2070346788, rs72554665, rs782317415, rs2148328905, rs1557230626
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RCV001377911
RCV001379702
RCV001388767
RCV001420429
RCV001420430
RCV002305609
RCV002305610
RCV002305616
RCV002305617
RCV001801166
RCV001961782
RCV002030520
RCV002249047
RCV002249998
RCV002250000
RCV002305837
RCV002305696
RCV002305697
RCV002305698
RCV002305699
RCV002305700
RCV002305701
RCV002305702
RCV002305703
RCV002305704
RCV002305705
RCV002305708
RCV002305709
RCV002305710
RCV002305711
RCV002305712
RCV002305713
RCV002305714
RCV002305717
RCV002305718
RCV002305719
RCV002305720
RCV002305722
RCV002305723
RCV002305725
RCV002305726
RCV002305728
RCV002305729
RCV002305730
RCV002305731
RCV002305735
RCV002305736
RCV002305737
RCV002305739
RCV002305740
RCV002305741
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RCV002305745
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RCV002305748
RCV002305749
RCV002305750
RCV002305753
RCV002305754
RCV002305755
RCV002305756
RCV002305757
RCV002305758
RCV002305759
RCV002305760
RCV002305762
RCV002305763
RCV002305766
RCV002305767
RCV002305768
RCV002305769
RCV002305771
RCV002305772
RCV002305773
RCV002305774
RCV002305775
RCV002305777
RCV002305778
RCV002305779
RCV002305780
RCV002305781
RCV002305782
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RCV002305789
RCV002305790
RCV002305791
RCV002305792
RCV002305793
RCV002305795
RCV002305796
RCV002305797
RCV002305798
RCV002305802
RCV002305809
RCV002305815
RCV002305816
RCV002305817
RCV002305818
RCV002305820
RCV002305822
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RCV002305826
RCV002305827
RCV002305828
RCV002305829
RCV002305830
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RCV002305834
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RCV002305838
RCV002305840
RCV002305841
RCV002305842
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RCV002305845
RCV002305847
RCV002305850
RCV002305851
RCV002305852
RCV002305853
RCV002305854
RCV002305858
RCV002305859
RCV002305860
RCV002305861
RCV002305862
RCV002305864
RCV002305866
RCV002305868
RCV002305869
RCV002305870
RCV002305871
RCV000079404
RCV002288482
RCV000180546
RCV000282708
RCV000179363
RCV000066231
RCV000066233
RCV000180200
RCV002305427
RCV002305428
RCV001857328
RCV002305429
RCV002305430
RCV002305431
RCV000174272
RCV000066246
RCV000991016
RCV000066251
RCV002305433
RCV000180545
RCV000818410
RCV000763201
RCV000066262
RCV000991015
RCV000818047
RCV000011130
RCV000011133
RCV000011135
RCV000011137
RCV000800624
RCV000704108
RCV000798781
RCV000821638
RCV000699943
RCV001060931
RCV002305435
RCV000143788
RCV000143789
RCV000011156
RCV000066276
RCV001264782
RCV000991014
RCV000066279
RCV002305437
RCV002305438
RCV001212765
RCV003231065
RCV003455814
RCV003510628
RCV003509325
RCV003623810
RCV002305498
RCV001857951
RCV002305516
RCV002305526
RCV000991011
RCV000991012
RCV002305556
RCV001059211
RCV001231280
RCV001244181
RCV002305586
RCV002305587
RCV002305589
RCV000174032
RCV000799977
Congenital nonspherocytic hemolytic anemia Likely pathogenic; Pathogenic rs137852339 RCV005410884
Early-onset coronary artery disease Pathogenic rs137852340 RCV004540993
Familial cancer of breast Likely pathogenic; Pathogenic rs137852341 RCV005887423
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
- no classification for the single variant rs2523262460, rs2523260532, rs2523262977, rs782130334, rs2523271048, rs2070375134, rs267606835 -
Cervical cancer Likely benign rs376714443 RCV005930343
Colon adenocarcinoma Uncertain significance rs201838012 RCV005930355
Decreased glucosephosphate isomerase level Uncertain significance rs1057518975 RCV000414805
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
6 Phosphogluconolactonase Deficiency Associate 3858849
Acute Disease Associate 35368337
Acute Febrile Encephalopathy Associate 31590661
Acute malaria Associate 28793894
Adenocarcinoma of Lung Associate 37315289
Adenocarcinoma of Lung Stimulate 38194707
Adrenoleukodystrophy Associate 6795626
Anemia Associate 18305266, 20200584, 32680472, 34014839, 7858267
Anemia Diamond Blackfan Associate 34526430
Anemia Hemolytic Associate 10745013, 15621740, 18568599, 22112733, 22139979, 2222408, 2836867, 29858578, 3012556, 33637102, 3393536, 35368337, 35858355, 36191877, 3858849
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