Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
2539
Gene name Gene Name - the full gene name approved by the HGNC.
Glucose-6-phosphate dehydrogenase
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
G6PD
Synonyms (NCBI Gene) Gene synonyms aliases
CNSHA1, G6PD1
Chromosome Chromosome number
X
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
Xq28
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes glucose-6-phosphate dehydrogenase. This protein is a cytosolic enzyme encoded by a housekeeping X-linked gene whose main function is to produce NADPH, a key electron donor in the defense against oxidizing agents and in reductive biosynth
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs1050828 C>T Pathogenic, other, not-provided, conflicting-interpretations-of-pathogenicity, uncertain-significance, drug-response Coding sequence variant, missense variant
rs1050829 T>A,C Pathogenic, other, conflicting-interpretations-of-pathogenicity, likely-benign, benign Coding sequence variant, missense variant
rs2515904 G>C Conflicting-interpretations-of-pathogenicity Intron variant
rs5030868 G>A Pathogenic, other, likely-pathogenic, pathogenic-likely-pathogenic, uncertain-significance Coding sequence variant, missense variant
rs5030869 C>A,T Pathogenic, other Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT002956 hsa-miR-1-3p pSILAC 18668040
MIRT002956 hsa-miR-1-3p Luciferase reporter assay 14697198
MIRT018235 hsa-miR-335-5p Microarray 18185580
MIRT002956 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT002956 hsa-miR-1-3p Proteomics 18668040
Transcription factors
Transcription factor Regulation Reference
CREM Repression 17273168
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IBA
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IDA 15858258, 35122041, 38066190
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IEA
GO:0004345 Function Glucose-6-phosphate dehydrogenase activity IMP 743300, 2420826, 5643703
GO:0005515 Function Protein binding IPI 21157431, 24769394, 35122041
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
305900 4057 ENSG00000160211
Protein
UniProt ID P11413
Protein name Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49)
Protein function Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. The main function of this enzyme is to provide reducing power (NADPH) and pentose ph
PDB 1QKI , 2BH9 , 2BHL , 5UKW , 6E07 , 6E08 , 6JYU , 6VA0 , 6VA7 , 6VA8 , 6VA9 , 6VAQ , 7SEH , 7SEI , 7SNF , 7SNG , 7SNH , 7SNI , 7TOE , 7TOF , 7UAG , 7UAL , 7UC2 , 7ZVD
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00479 G6PD_N 35 210 Glucose-6-phosphate dehydrogenase, NAD binding domain Domain
PF02781 G6PD_C 212 509 Glucose-6-phosphate dehydrogenase, C-terminal domain Domain
Tissue specificity TISSUE SPECIFICITY: Isoform Long is found in lymphoblasts, granulocytes and sperm.
Sequence
Sequence length 515
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Pentose phosphate pathway
Glutathione metabolism
Metabolic pathways
Carbon metabolism
Central carbon metabolism in cancer
Diabetic cardiomyopathy
  TP53 Regulates Metabolic Genes
Pentose phosphate pathway
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Disease merge term Disease name dbSNP ID References
Anemia anemia, nonspherocytic hemolytic, due to g6pd deficiency, G6PD deficiency rs137852347, rs72554665, rs137852330, rs1557230040, rs137852317, rs137852349, rs387906468, rs137852331, rs782090947, rs137852340, rs137852318, rs137852332, rs5030872, rs1557229736, rs137852341
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N/A
Coronary artery disease Early-onset coronary artery disease rs137852340 N/A
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Diabetes Type 2 diabetes N/A N/A GWAS
Systemic lupus erythematosus Systemic lupus erythematosus N/A N/A GWAS
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
6 Phosphogluconolactonase Deficiency Associate 3858849
Acute Disease Associate 35368337
Acute Febrile Encephalopathy Associate 31590661
Acute malaria Associate 28793894
Adenocarcinoma of Lung Associate 37315289
Adenocarcinoma of Lung Stimulate 38194707
Adrenoleukodystrophy Associate 6795626
Anemia Associate 18305266, 20200584, 32680472, 34014839, 7858267
Anemia Diamond Blackfan Associate 34526430
Anemia Hemolytic Associate 10745013, 15621740, 18568599, 22112733, 22139979, 2222408, 2836867, 29858578, 3012556, 33637102, 3393536, 35368337, 35858355, 36191877, 3858849
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