Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
253827
Gene name Gene Name - the full gene name approved by the HGNC.
Methionine sulfoxide reductase B3
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
MSRB3
Synonyms (NCBI Gene) Gene synonyms aliases
DFNB74
Disease Acronyms (UniProt) Disease acronyms from UniProt database
DFNB74
Chromosome Chromosome number
12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12q14.3
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene catalyzes the reduction of methionine sulfoxide to methionine. This enzyme acts as a monomer and requires zinc as a cofactor. Several transcript variants encoding two different isoforms have been found for this gene. One o
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs144038296 C>A,T Conflicting-interpretations-of-pathogenicity Missense variant, genic downstream transcript variant, coding sequence variant
rs149258390 C>A,T Pathogenic Synonymous variant, intron variant, stop gained, coding sequence variant
rs201306709 G>A Likely-pathogenic, not-provided Genic downstream transcript variant, splice acceptor variant
rs387907088 T>G Pathogenic Missense variant, coding sequence variant
rs751906778 G>A Pathogenic Splice acceptor variant, genic downstream transcript variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT022224 hsa-miR-124-3p Microarray 18668037
MIRT026193 hsa-miR-192-5p Microarray 19074876
MIRT656117 hsa-miR-6858-3p HITS-CLIP 23824327
MIRT656116 hsa-miR-4676-5p HITS-CLIP 23824327
MIRT656115 hsa-miR-575 HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 25416956
GO:0005737 Component Cytoplasm IBA 21873635
GO:0005739 Component Mitochondrion IDA 14699060
GO:0005783 Component Endoplasmic reticulum IDA 14699060
GO:0005829 Component Cytosol TAS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
613719 27375 ENSG00000174099
Protein
UniProt ID Q8IXL7
Protein name Methionine-R-sulfoxide reductase B3 (MsrB3) (EC 1.8.4.12) (EC 1.8.4.14)
Protein function Catalyzes the reduction of free and protein-bound methionine sulfoxide to methionine. Isoform 2 is essential for hearing.
PDB 6QA0
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01641 SelR 49 168 SelR domain Family
Tissue specificity TISSUE SPECIFICITY: Widely expressed. {ECO:0000269|PubMed:15914630, ECO:0000269|PubMed:21185009}.
Sequence
Sequence length 192
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Protein repair
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Deafness DEAFNESS, AUTOSOMAL RECESSIVE 74 rs267607135, rs387906219, rs387906220, rs387906221, rs387906222, rs606231120, rs267606855, rs121918370, rs137853185, rs137853186, rs137853187, rs137853188, rs587776522, rs587776523, rs200781822
View all (1019 more)
21185009, 24191262
Nonsyndromic deafness Nonsyndromic Deafness rs606231410, rs794729665, rs730880338, rs1566538321 21185009, 24191262, 26649646
Unknown
Disease term Disease name Evidence References Source
Glioblastoma Glioblastoma CRISPR screening of E3 ubiquitin ligases reveals Ring Finger Protein 185 as a novel tumor suppressor in glioblastoma repressed by promoter hypermethylation and miR-587 GWAS, CBGDA
Diabetes Diabetes GWAS
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Associate 30775993
Brain Infarction Associate 30775993
Brain Injuries Associate 30775993
Colonic Neoplasms Associate 37884639
Deafness Associate 24949729
Hippocampal Sclerosis Associate 36674637
Neoplasm Metastasis Associate 25176350
Neoplasms Associate 25176350
Non Muscle Invasive Bladder Neoplasms Associate 31011911
Obesity Associate 31900140