Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
23673
Gene name Gene Name - the full gene name approved by the HGNC.
Syntaxin 12
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
STX12
Synonyms (NCBI Gene) Gene synonyms aliases
STX13, STX14
Chromosome Chromosome number
1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1p35.3
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT029247 hsa-miR-26b-5p Microarray 19088304
MIRT050667 hsa-miR-18a-5p CLASH 23622248
MIRT044373 hsa-miR-106b-5p CLASH 23622248
MIRT698742 hsa-miR-613 HITS-CLIP 23313552
MIRT698741 hsa-miR-206 HITS-CLIP 23313552
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000045 Process Autophagosome assembly IMP 24095276
GO:0000139 Component Golgi membrane IEA
GO:0000149 Function SNARE binding IBA 21873635
GO:0000407 Component Phagophore assembly site IMP 24095276
GO:0005484 Function SNAP receptor activity IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
606892 11430 ENSG00000117758
Protein
UniProt ID Q86Y82
Protein name Syntaxin-12
Protein function SNARE promoting fusion of transport vesicles with target membranes. Together with SNARE STX6, promotes movement of vesicles from endosomes to the cell membrane, and may therefore function in the endocytic recycling pathway. Through complex forma
PDB 2DNX
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF14523 Syntaxin_2 29 132 Syntaxin-like protein Domain
PF05739 SNARE 214 266 SNARE domain Family
Sequence
MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQ
ENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAV
QRRVSEKEKESI
ARARAGSRLSAEERQREEQLVSFDSHEEWNQMQSQEDEVAITEQDLEL
IKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQLQRA
AYYQKKSRKKMCILVLVLSVIILILG
LIIWLVYKTK
Sequence length 276
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  
  Phagosome  
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
Cholelithiasis Cholelithiasis rs121918440, rs72552778, rs387906528, rs759202962, rs377160065, rs1051861187, rs757693457, rs752563752 17632509
Unknown
Disease term Disease name Evidence References Source
Diabetes Diabetes GWAS
Associations from Text Mining
Disease Name Relationship Type References
Schizophrenia Associate 22441714