Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
23426
Gene name Gene Name - the full gene name approved by the HGNC.
Glutamate receptor interacting protein 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
GRIP1
Synonyms (NCBI Gene) Gene synonyms aliases
FRASRS3, GRIP
Disease Acronyms (UniProt) Disease acronyms from UniProt database
FRASRS3
Chromosome Chromosome number
12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12q14.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the glutamate receptor interacting protein family. The encoded scaffold protein binds to and mediates the trafficking and membrane organization of a number of transmembrane proteins. Alternatively spliced transcript variants
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs35499444 TT>-,T,TTT,TTTT Conflicting-interpretations-of-pathogenicity, benign 3 prime UTR variant
rs144494437 A>C Conflicting-interpretations-of-pathogenicity, likely-benign Missense variant, coding sequence variant
rs187691546 G>A Conflicting-interpretations-of-pathogenicity Synonymous variant, coding sequence variant
rs199768740 C>T Likely-benign, likely-pathogenic Missense variant, coding sequence variant
rs397514485 C>G Pathogenic Splice donor variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT1034718 hsa-miR-1208 CLIP-seq
MIRT1034719 hsa-miR-2355-3p CLIP-seq
MIRT1034720 hsa-miR-3119 CLIP-seq
MIRT1034721 hsa-miR-34b CLIP-seq
MIRT1034722 hsa-miR-3529 CLIP-seq
Transcription factors
Transcription factor Regulation Reference
PML Activation 23542129
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 11641419, 17545996
GO:0005789 Component Endoplasmic reticulum membrane IEA
GO:0005829 Component Cytosol TAS
GO:0005886 Component Plasma membrane ISS
GO:0005886 Component Plasma membrane TAS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
604597 18708 ENSG00000155974
Protein
UniProt ID Q9Y3R0
Protein name Glutamate receptor-interacting protein 1 (GRIP-1)
Protein function May play a role as a localized scaffold for the assembly of a multiprotein signaling complex and as mediator of the trafficking of its binding partners at specific subcellular location in neurons (PubMed:10197531). Through complex formation with
PDB 2JIL
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00595 PDZ 53 133 PDZ domain Domain
PF00595 PDZ 152 235 PDZ domain Domain
PF00595 PDZ 252 333 PDZ domain Domain
PF17820 PDZ_6 502 558 PDZ domain Domain
PF00595 PDZ 573 655 PDZ domain Domain
PF00595 PDZ 673 752 PDZ domain Domain
PF00595 PDZ 1004 1083 PDZ domain Domain
Sequence
MIAVSFKCRCQILRRLTKDESPYTKSASQTKPPDGALAVRRQSIPEEFKGSTVVELMKKE
GTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISL
LKNVGERVVLEVE
YELPPVSVQGSSVIFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPV
VITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAALLIE
YDVSV
MDSVATASGPLLVEVAKTPGASLGVALTTSMCCNKQVIVIDKIKSASIADRCGALHVGDH
ILSIDGTSMEYCTLAEATQFLANTTDQVKLEIL
PHHQTRLALKGPDHVKIQRSDRQLTWD
SWASNHSSLHTNHHYNTYHPDHCRVPALTFPKAPPPNSPPALVSSSFSPTSMSAYSLSSL
NMGTLPRSLYSTSPRGTMMRRRLKKKDFKSSLSLASSTVGLAGQVVHTETTEVVLTADPV
TGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEA
SQLLRDSSITSKVTLEIE
FDVAESVIPSSGTFHVKLPKKHNVELGITISSPSSRKPGDPL
VISDIKKGSVAHRTGTLELGDKLLAIDNIRLDNCSMEDAVQILQQCEDLVKLKIR
KDEDN
SDEQESSGAIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRI
LAINSSSLKGKPLSEAIHLLQMAGETVTLKIK
KQTDAQSASSPKKFPISSHLSDLGDVEE
DSSPAQKPGKLSDMYPSTVPSVDSAVDSWDGSAIDTSYGTQGTSFQASGYNFNTYDWRSP
KQRGSLSPVTKPRSQTYPDVGLSYEDWDRSTASGFAGAADSAETEQEENFWSQALEDLET
CGQSGILRELEEKADRRVSLRNMTLLATIMSGSTMSLNHEAPTPRSQLGRQASFQERSSS
RPHYSQTTRSNTLPSDVGRKSVTLRKMKQEIKEIMSPTPVELHKVTLYKDSDMEDFGFSV
ADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDL
VIS
RNPLASQKSIDQQSLPGDWSEQNSAFFQQPSHGGNLETREPTNTL
Sequence length 1128
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Trafficking of GluR2-containing AMPA receptors
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Amyotrophic lateral sclerosis Amyotrophic Lateral Sclerosis rs267607084, rs312262720, rs312262752, rs121908287, rs121908288, rs29001584, rs28941475, rs121434378, rs386134173, rs386134174, rs80356730, rs80356727, rs4884357, rs80356717, rs80356733
View all (171 more)
23624525
Cryptorchidism Cryptorchidism rs121912555, rs104894697, rs104894698, rs398122886
Fraser syndrome Cryptophthalmos syndrome, FRASER SYNDROME 3, FRASER SYNDROME 1, Fraser syndrome rs1566169711, rs120074156, rs120074157, rs120074158, rs120074159, rs730882178, rs730882179, rs730882180, rs397514485, rs397514486, rs794727195, rs794727365, rs377046630, rs886037766, rs886037765
View all (16 more)
22510445, 14730302, 16880404, 24357607
Hearing loss Conductive hearing loss rs267607135, rs267606855, rs779841884, rs267606854, rs28942097, rs121908073, rs121908076, rs74315289, rs121908144, rs111033313, rs74315437, rs121908348, rs121908349, rs121908350, rs397515359
View all (184 more)
Unknown
Disease term Disease name Evidence References Source
Ambiguous genitalia Ambiguous Genitalia ClinVar
Pulmonary hypoplasia Congenital hypoplasia of lung ClinVar
Mental depression Major Depressive Disorder 24964207 ClinVar
Renal hypoplasia Congenital hypoplasia of kidney ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Breast Neoplasms Associate 35441810
Endometrial Neoplasms Associate 30888986
Fraser Syndrome Associate 29197384
Lipoma Associate 26202160
Neoplasms Associate 37686244
Pdgfra Associated Chronic Eosinophilic Leukemia Associate 30697976