Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	23331
Gene name Gene Name - the full gene name approved by the HGNC.	Tetratricopeptide repeat domain 28
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	TTC28
Synonyms (NCBI Gene) Gene synonyms aliases	TPRBK
Chromosome Chromosome number	22
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	22q12.1

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miRTarBase ID	miRNA	Experiments	Reference
MIRT047205	hsa-miR-182-5p	CLASH	23622248
MIRT043918	hsa-miR-378a-3p	CLASH	23622248
MIRT672876	hsa-miR-548c-3p	HITS-CLIP	23824327
MIRT672875	hsa-miR-6771-3p	HITS-CLIP	23824327
MIRT672874	hsa-miR-3675-3p	HITS-CLIP	23824327
MIRT672873	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT672872	hsa-miR-3190-5p	HITS-CLIP	23824327
MIRT672871	hsa-miR-3926	HITS-CLIP	23824327
MIRT672870	hsa-miR-548s	HITS-CLIP	23824327
MIRT665629	hsa-miR-374c-3p	HITS-CLIP	23824327
MIRT665627	hsa-miR-5588-3p	HITS-CLIP	23824327
MIRT665628	hsa-miR-1296-3p	HITS-CLIP	23824327
MIRT665625	hsa-miR-5690	HITS-CLIP	23824327
MIRT665626	hsa-miR-20b-3p	HITS-CLIP	23824327
MIRT665624	hsa-miR-214-5p	HITS-CLIP	23824327
MIRT665622	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT665623	hsa-miR-1271-3p	HITS-CLIP	23824327
MIRT665621	hsa-miR-550a-3-5p	HITS-CLIP	23824327
MIRT665620	hsa-miR-550a-5p	HITS-CLIP	23824327
MIRT665618	hsa-miR-6748-5p	HITS-CLIP	23824327
MIRT665619	hsa-miR-877-5p	HITS-CLIP	23824327
MIRT665617	hsa-miR-6866-5p	HITS-CLIP	23824327
MIRT665616	hsa-miR-4727-3p	HITS-CLIP	23824327
MIRT665615	hsa-miR-7977	HITS-CLIP	23824327
MIRT665614	hsa-miR-6514-3p	HITS-CLIP	23824327
MIRT665613	hsa-miR-6741-5p	HITS-CLIP	23824327
MIRT672872	hsa-miR-3190-5p	PAR-CLIP	27292025
MIRT672872	hsa-miR-3190-5p	PAR-CLIP	27292025
MIRT672874	hsa-miR-3675-3p	PAR-CLIP	27292025
MIRT672874	hsa-miR-3675-3p	PAR-CLIP	27292025
MIRT672871	hsa-miR-3926	PAR-CLIP	27292025
MIRT672871	hsa-miR-3926	PAR-CLIP	27292025
MIRT672870	hsa-miR-548s	PAR-CLIP	27292025
MIRT672870	hsa-miR-548s	PAR-CLIP	27292025
MIRT672875	hsa-miR-6771-3p	PAR-CLIP	27292025
MIRT672875	hsa-miR-6771-3p	PAR-CLIP	27292025
MIRT672873	hsa-miR-6849-3p	PAR-CLIP	27292025
MIRT672873	hsa-miR-6849-3p	PAR-CLIP	27292025
MIRT672876	hsa-miR-548c-3p	HITS-CLIP	23824327
MIRT672875	hsa-miR-6771-3p	HITS-CLIP	23824327
MIRT672874	hsa-miR-3675-3p	HITS-CLIP	23824327
MIRT672873	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT672872	hsa-miR-3190-5p	HITS-CLIP	23824327
MIRT672871	hsa-miR-3926	HITS-CLIP	23824327
MIRT672870	hsa-miR-548s	HITS-CLIP	23824327
MIRT665629	hsa-miR-374c-3p	HITS-CLIP	23824327
MIRT665627	hsa-miR-5588-3p	HITS-CLIP	23824327
MIRT665628	hsa-miR-1296-3p	HITS-CLIP	23824327
MIRT665625	hsa-miR-5690	HITS-CLIP	23824327
MIRT665626	hsa-miR-20b-3p	HITS-CLIP	23824327
MIRT665624	hsa-miR-214-5p	HITS-CLIP	23824327
MIRT665622	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT665623	hsa-miR-1271-3p	HITS-CLIP	23824327
MIRT665621	hsa-miR-550a-3-5p	HITS-CLIP	23824327
MIRT665620	hsa-miR-550a-5p	HITS-CLIP	23824327
MIRT665618	hsa-miR-6748-5p	HITS-CLIP	23824327
MIRT665619	hsa-miR-877-5p	HITS-CLIP	23824327
MIRT665617	hsa-miR-6866-5p	HITS-CLIP	23824327
MIRT665616	hsa-miR-4727-3p	HITS-CLIP	23824327
MIRT665615	hsa-miR-7977	HITS-CLIP	23824327
MIRT665614	hsa-miR-6514-3p	HITS-CLIP	23824327
MIRT665613	hsa-miR-6741-5p	HITS-CLIP	23824327
MIRT1461109	hsa-miR-10a	CLIP-seq
MIRT1461110	hsa-miR-10b	CLIP-seq
MIRT1461111	hsa-miR-1200	CLIP-seq
MIRT1461112	hsa-miR-1207-5p	CLIP-seq
MIRT1461113	hsa-miR-125a-5p	CLIP-seq
MIRT1461114	hsa-miR-125b	CLIP-seq
MIRT1461115	hsa-miR-1262	CLIP-seq
MIRT1461116	hsa-miR-1273e	CLIP-seq
MIRT1461117	hsa-miR-127-3p	CLIP-seq
MIRT1461118	hsa-miR-1290	CLIP-seq
MIRT1461119	hsa-miR-1294	CLIP-seq
MIRT1461120	hsa-miR-1343	CLIP-seq
MIRT1461121	hsa-miR-138	CLIP-seq
MIRT1461122	hsa-miR-141	CLIP-seq
MIRT1461123	hsa-miR-142-3p	CLIP-seq
MIRT1461124	hsa-miR-148a	CLIP-seq
MIRT1461125	hsa-miR-148b	CLIP-seq
MIRT1461126	hsa-miR-152	CLIP-seq
MIRT1461127	hsa-miR-1827	CLIP-seq
MIRT1461128	hsa-miR-1976	CLIP-seq
MIRT1461129	hsa-miR-200a	CLIP-seq
MIRT1461130	hsa-miR-2052	CLIP-seq
MIRT1461131	hsa-miR-2114	CLIP-seq
MIRT1461132	hsa-miR-24	CLIP-seq
MIRT1461133	hsa-miR-2964a-3p	CLIP-seq
MIRT1461134	hsa-miR-300	CLIP-seq
MIRT1461135	hsa-miR-302f	CLIP-seq
MIRT1461136	hsa-miR-3074-5p	CLIP-seq
MIRT1461137	hsa-miR-3120-5p	CLIP-seq
MIRT1461138	hsa-miR-3122	CLIP-seq
MIRT1461139	hsa-miR-3124-3p	CLIP-seq
MIRT1461140	hsa-miR-3126-5p	CLIP-seq
MIRT1461141	hsa-miR-3132	CLIP-seq
MIRT1461142	hsa-miR-3148	CLIP-seq
MIRT1461143	hsa-miR-3151	CLIP-seq
MIRT1461144	hsa-miR-3153	CLIP-seq
MIRT1461145	hsa-miR-3159	CLIP-seq
MIRT1461146	hsa-miR-3163	CLIP-seq
MIRT1461147	hsa-miR-3174	CLIP-seq
MIRT1461148	hsa-miR-3178	CLIP-seq
MIRT1461149	hsa-miR-331-3p	CLIP-seq
MIRT1461150	hsa-miR-3591-3p	CLIP-seq
MIRT1461151	hsa-miR-3613-3p	CLIP-seq
MIRT1461152	hsa-miR-3617	CLIP-seq
MIRT1461153	hsa-miR-3622a-3p	CLIP-seq
MIRT1461154	hsa-miR-3622b-3p	CLIP-seq
MIRT1461155	hsa-miR-3649	CLIP-seq
MIRT1461156	hsa-miR-3652	CLIP-seq
MIRT1461157	hsa-miR-3661	CLIP-seq
MIRT1461158	hsa-miR-3664-5p	CLIP-seq
MIRT1461159	hsa-miR-3689a-3p	CLIP-seq
MIRT1461160	hsa-miR-3689c	CLIP-seq
MIRT1461161	hsa-miR-370	CLIP-seq
MIRT1461162	hsa-miR-371-5p	CLIP-seq
MIRT1461163	hsa-miR-371b-3p	CLIP-seq
MIRT1461164	hsa-miR-371b-5p	CLIP-seq
MIRT1461165	hsa-miR-378g	CLIP-seq
MIRT1461166	hsa-miR-381	CLIP-seq
MIRT1461167	hsa-miR-3913-5p	CLIP-seq
MIRT1461168	hsa-miR-3929	CLIP-seq
MIRT1461169	hsa-miR-410	CLIP-seq
MIRT1461170	hsa-miR-4259	CLIP-seq
MIRT1461171	hsa-miR-4270	CLIP-seq
MIRT1461172	hsa-miR-4282	CLIP-seq
MIRT1461173	hsa-miR-4284	CLIP-seq
MIRT1461174	hsa-miR-4292	CLIP-seq
MIRT1461175	hsa-miR-4313	CLIP-seq
MIRT1461176	hsa-miR-4319	CLIP-seq
MIRT1461177	hsa-miR-4324	CLIP-seq
MIRT1461178	hsa-miR-4419a	CLIP-seq
MIRT1461179	hsa-miR-4419b	CLIP-seq
MIRT1461180	hsa-miR-4425	CLIP-seq
MIRT1461181	hsa-miR-4430	CLIP-seq
MIRT1461182	hsa-miR-4433	CLIP-seq
MIRT1461183	hsa-miR-4437	CLIP-seq
MIRT1461184	hsa-miR-4441	CLIP-seq
MIRT1461185	hsa-miR-4447	CLIP-seq
MIRT1461186	hsa-miR-4456	CLIP-seq
MIRT1461187	hsa-miR-4459	CLIP-seq
MIRT1461188	hsa-miR-4472	CLIP-seq
MIRT1461189	hsa-miR-4478	CLIP-seq
MIRT1461190	hsa-miR-4486	CLIP-seq
MIRT1461191	hsa-miR-4505	CLIP-seq
MIRT1461192	hsa-miR-4510	CLIP-seq
MIRT1461193	hsa-miR-4522	CLIP-seq
MIRT1461194	hsa-miR-4530	CLIP-seq
MIRT1461195	hsa-miR-4649-3p	CLIP-seq
MIRT1461196	hsa-miR-4653-3p	CLIP-seq
MIRT1461197	hsa-miR-4668-5p	CLIP-seq
MIRT1461198	hsa-miR-4674	CLIP-seq
MIRT1461199	hsa-miR-4687-3p	CLIP-seq
MIRT1461200	hsa-miR-4697-3p	CLIP-seq
MIRT1461201	hsa-miR-4701-3p	CLIP-seq
MIRT1461202	hsa-miR-4707-5p	CLIP-seq
MIRT1461203	hsa-miR-4722-3p	CLIP-seq
MIRT1461204	hsa-miR-4728-5p	CLIP-seq
MIRT1461205	hsa-miR-4755-3p	CLIP-seq
MIRT1461206	hsa-miR-4763-3p	CLIP-seq
MIRT1461207	hsa-miR-4768-3p	CLIP-seq
MIRT1461208	hsa-miR-4799-5p	CLIP-seq
MIRT1461209	hsa-miR-485-3p	CLIP-seq
MIRT1461210	hsa-miR-485-5p	CLIP-seq
MIRT1461211	hsa-miR-491-5p	CLIP-seq
MIRT1461212	hsa-miR-492	CLIP-seq
MIRT1461213	hsa-miR-515-5p	CLIP-seq
MIRT1461214	hsa-miR-542-3p	CLIP-seq
MIRT1461215	hsa-miR-544b	CLIP-seq
MIRT1461216	hsa-miR-548aa	CLIP-seq
MIRT1461217	hsa-miR-549	CLIP-seq
MIRT1461218	hsa-miR-550a	CLIP-seq
MIRT1461219	hsa-miR-571	CLIP-seq
MIRT1461220	hsa-miR-619	CLIP-seq
MIRT1461221	hsa-miR-631	CLIP-seq
MIRT1461222	hsa-miR-641	CLIP-seq
MIRT1461223	hsa-miR-647	CLIP-seq
MIRT1461224	hsa-miR-665	CLIP-seq
MIRT1461225	hsa-miR-877	CLIP-seq
MIRT1461226	hsa-miR-921	CLIP-seq
MIRT1461227	hsa-miR-940	CLIP-seq
MIRT1461168	hsa-miR-3929	CLIP-seq
MIRT1461179	hsa-miR-4419b	CLIP-seq
MIRT1461189	hsa-miR-4478	CLIP-seq
MIRT1461210	hsa-miR-485-5p	CLIP-seq
MIRT1461112	hsa-miR-1207-5p	CLIP-seq
MIRT1923043	hsa-miR-3150b-3p	CLIP-seq
MIRT1923044	hsa-miR-3184	CLIP-seq
MIRT1923045	hsa-miR-3918	CLIP-seq
MIRT1923046	hsa-miR-3934	CLIP-seq
MIRT1923047	hsa-miR-423-5p	CLIP-seq
MIRT1923048	hsa-miR-4688	CLIP-seq
MIRT1923049	hsa-miR-4689	CLIP-seq
MIRT1461206	hsa-miR-4763-3p	CLIP-seq
MIRT1923050	hsa-miR-4779	CLIP-seq
MIRT1923051	hsa-miR-4784	CLIP-seq
MIRT1923052	hsa-miR-486-3p	CLIP-seq
MIRT1923053	hsa-miR-552	CLIP-seq
MIRT2138484	hsa-miR-1205	CLIP-seq
MIRT1461113	hsa-miR-125a-5p	CLIP-seq
MIRT1461114	hsa-miR-125b	CLIP-seq
MIRT1461117	hsa-miR-127-3p	CLIP-seq
MIRT2138485	hsa-miR-137	CLIP-seq
MIRT2138486	hsa-miR-147	CLIP-seq
MIRT1461128	hsa-miR-1976	CLIP-seq
MIRT1461132	hsa-miR-24	CLIP-seq
MIRT2138487	hsa-miR-25	CLIP-seq
MIRT2138488	hsa-miR-3119	CLIP-seq
MIRT1461138	hsa-miR-3122	CLIP-seq
MIRT2138489	hsa-miR-3140-3p	CLIP-seq
MIRT2138490	hsa-miR-32	CLIP-seq
MIRT1461149	hsa-miR-331-3p	CLIP-seq
MIRT2138491	hsa-miR-33a	CLIP-seq
MIRT2138492	hsa-miR-33b	CLIP-seq
MIRT2138493	hsa-miR-3614-5p	CLIP-seq
MIRT1461153	hsa-miR-3622a-3p	CLIP-seq
MIRT1461154	hsa-miR-3622b-3p	CLIP-seq
MIRT2138494	hsa-miR-363	CLIP-seq
MIRT1461156	hsa-miR-3652	CLIP-seq
MIRT2138495	hsa-miR-367	CLIP-seq
MIRT1461159	hsa-miR-3689a-3p	CLIP-seq
MIRT1461160	hsa-miR-3689c	CLIP-seq
MIRT1461161	hsa-miR-370	CLIP-seq
MIRT2138496	hsa-miR-3911	CLIP-seq
MIRT1461167	hsa-miR-3913-5p	CLIP-seq
MIRT2138497	hsa-miR-3915	CLIP-seq
MIRT2138498	hsa-miR-3928	CLIP-seq
MIRT2138499	hsa-miR-4257	CLIP-seq
MIRT1461173	hsa-miR-4284	CLIP-seq
MIRT1461176	hsa-miR-4319	CLIP-seq
MIRT1461181	hsa-miR-4430	CLIP-seq
MIRT1461182	hsa-miR-4433	CLIP-seq
MIRT2138500	hsa-miR-4434	CLIP-seq
MIRT1461187	hsa-miR-4459	CLIP-seq
MIRT1461191	hsa-miR-4505	CLIP-seq
MIRT2138501	hsa-miR-4516	CLIP-seq
MIRT1461194	hsa-miR-4530	CLIP-seq
MIRT1461204	hsa-miR-4728-5p	CLIP-seq
MIRT2138502	hsa-miR-4767	CLIP-seq
MIRT1461207	hsa-miR-4768-3p	CLIP-seq
MIRT2138503	hsa-miR-4780	CLIP-seq
MIRT2138504	hsa-miR-505	CLIP-seq
MIRT1461215	hsa-miR-544b	CLIP-seq
MIRT1461216	hsa-miR-548aa	CLIP-seq
MIRT2138505	hsa-miR-623	CLIP-seq
MIRT2138506	hsa-miR-644	CLIP-seq
MIRT2138507	hsa-miR-759	CLIP-seq
MIRT2138508	hsa-miR-767-3p	CLIP-seq
MIRT2138509	hsa-miR-92a	CLIP-seq
MIRT2138510	hsa-miR-92b	CLIP-seq
MIRT1461113	hsa-miR-125a-5p	CLIP-seq
MIRT1461114	hsa-miR-125b	CLIP-seq
MIRT1461115	hsa-miR-1262	CLIP-seq
MIRT1461117	hsa-miR-127-3p	CLIP-seq
MIRT2359427	hsa-miR-1302	CLIP-seq
MIRT1461120	hsa-miR-1343	CLIP-seq
MIRT1461121	hsa-miR-138	CLIP-seq
MIRT1461124	hsa-miR-148a	CLIP-seq
MIRT1461125	hsa-miR-148b	CLIP-seq
MIRT1461126	hsa-miR-152	CLIP-seq
MIRT2359428	hsa-miR-1825	CLIP-seq
MIRT2359429	hsa-miR-1972	CLIP-seq
MIRT2359430	hsa-miR-205	CLIP-seq
MIRT2359431	hsa-miR-2278	CLIP-seq
MIRT1461132	hsa-miR-24	CLIP-seq
MIRT2359432	hsa-miR-3136-3p	CLIP-seq
MIRT1461148	hsa-miR-3178	CLIP-seq
MIRT1461149	hsa-miR-331-3p	CLIP-seq
MIRT2138493	hsa-miR-3614-5p	CLIP-seq
MIRT1461153	hsa-miR-3622a-3p	CLIP-seq
MIRT1461154	hsa-miR-3622b-3p	CLIP-seq
MIRT1461156	hsa-miR-3652	CLIP-seq
MIRT1461161	hsa-miR-370	CLIP-seq
MIRT1461173	hsa-miR-4284	CLIP-seq
MIRT2359433	hsa-miR-4298	CLIP-seq
MIRT1461176	hsa-miR-4319	CLIP-seq
MIRT1461181	hsa-miR-4430	CLIP-seq
MIRT1461182	hsa-miR-4433	CLIP-seq
MIRT1461185	hsa-miR-4447	CLIP-seq
MIRT1461186	hsa-miR-4456	CLIP-seq
MIRT1461187	hsa-miR-4459	CLIP-seq
MIRT1461188	hsa-miR-4472	CLIP-seq
MIRT1461190	hsa-miR-4486	CLIP-seq
MIRT1461191	hsa-miR-4505	CLIP-seq
MIRT1461194	hsa-miR-4530	CLIP-seq
MIRT2359434	hsa-miR-4678	CLIP-seq
MIRT1461201	hsa-miR-4701-3p	CLIP-seq
MIRT1461204	hsa-miR-4728-5p	CLIP-seq
MIRT1461207	hsa-miR-4768-3p	CLIP-seq
MIRT1461214	hsa-miR-542-3p	CLIP-seq
MIRT1461215	hsa-miR-544b	CLIP-seq
MIRT1461223	hsa-miR-647	CLIP-seq
MIRT2359435	hsa-miR-663b	CLIP-seq
MIRT1461128	hsa-miR-1976	CLIP-seq
MIRT2396450	hsa-miR-2277-3p	CLIP-seq
MIRT1461132	hsa-miR-24	CLIP-seq
MIRT1461161	hsa-miR-370	CLIP-seq
MIRT1461173	hsa-miR-4284	CLIP-seq
MIRT1461216	hsa-miR-548aa	CLIP-seq
MIRT2396451	hsa-miR-563	CLIP-seq
MIRT2396452	hsa-miR-659	CLIP-seq
MIRT1461137	hsa-miR-3120-5p	CLIP-seq
MIRT1461151	hsa-miR-3613-3p	CLIP-seq
MIRT1461158	hsa-miR-3664-5p	CLIP-seq
MIRT1461162	hsa-miR-371-5p	CLIP-seq
MIRT1461164	hsa-miR-371b-5p	CLIP-seq
MIRT2462600	hsa-miR-451b	CLIP-seq
MIRT1461193	hsa-miR-4522	CLIP-seq
MIRT2462601	hsa-miR-4708-3p	CLIP-seq
MIRT2462602	hsa-miR-4753-5p	CLIP-seq
MIRT2462603	hsa-miR-4766-3p	CLIP-seq
MIRT2652627	hsa-miR-1	CLIP-seq
MIRT2652628	hsa-miR-106a	CLIP-seq
MIRT2652629	hsa-miR-106b	CLIP-seq
MIRT1461112	hsa-miR-1207-5p	CLIP-seq
MIRT2652630	hsa-miR-1224-3p	CLIP-seq
MIRT2652631	hsa-miR-1257	CLIP-seq
MIRT2652632	hsa-miR-1260	CLIP-seq
MIRT2652633	hsa-miR-1260b	CLIP-seq
MIRT1461116	hsa-miR-1273e	CLIP-seq
MIRT2652634	hsa-miR-1280	CLIP-seq
MIRT2652635	hsa-miR-139-5p	CLIP-seq
MIRT2652636	hsa-miR-140-3p	CLIP-seq
MIRT1461122	hsa-miR-141	CLIP-seq
MIRT2652637	hsa-miR-149	CLIP-seq
MIRT2652638	hsa-miR-151-3p	CLIP-seq
MIRT2652639	hsa-miR-17	CLIP-seq
MIRT1461127	hsa-miR-1827	CLIP-seq
MIRT1461128	hsa-miR-1976	CLIP-seq
MIRT1461129	hsa-miR-200a	CLIP-seq
MIRT2652640	hsa-miR-206	CLIP-seq
MIRT2652641	hsa-miR-20a	CLIP-seq
MIRT2652642	hsa-miR-20b	CLIP-seq
MIRT2652643	hsa-miR-2113	CLIP-seq
MIRT2652644	hsa-miR-217	CLIP-seq
MIRT1461132	hsa-miR-24	CLIP-seq
MIRT1461133	hsa-miR-2964a-3p	CLIP-seq
MIRT1461135	hsa-miR-302f	CLIP-seq
MIRT1461138	hsa-miR-3122	CLIP-seq
MIRT2652645	hsa-miR-3138	CLIP-seq
MIRT1923043	hsa-miR-3150b-3p	CLIP-seq
MIRT2652646	hsa-miR-3164	CLIP-seq
MIRT1923044	hsa-miR-3184	CLIP-seq
MIRT2652647	hsa-miR-34c-3p	CLIP-seq
MIRT2652648	hsa-miR-3609	CLIP-seq
MIRT1461153	hsa-miR-3622a-3p	CLIP-seq
MIRT1461154	hsa-miR-3622b-3p	CLIP-seq
MIRT2652649	hsa-miR-3660	CLIP-seq
MIRT2652650	hsa-miR-3673	CLIP-seq
MIRT2652651	hsa-miR-3677-5p	CLIP-seq
MIRT1461159	hsa-miR-3689a-3p	CLIP-seq
MIRT1461160	hsa-miR-3689c	CLIP-seq
MIRT2652652	hsa-miR-3689d	CLIP-seq
MIRT2652653	hsa-miR-3691-5p	CLIP-seq
MIRT1461161	hsa-miR-370	CLIP-seq
MIRT2138496	hsa-miR-3911	CLIP-seq
MIRT1461167	hsa-miR-3913-5p	CLIP-seq
MIRT1923045	hsa-miR-3918	CLIP-seq
MIRT2652654	hsa-miR-3922-5p	CLIP-seq
MIRT1923046	hsa-miR-3934	CLIP-seq
MIRT1923047	hsa-miR-423-5p	CLIP-seq
MIRT2652655	hsa-miR-4265	CLIP-seq
MIRT1461171	hsa-miR-4270	CLIP-seq
MIRT2652656	hsa-miR-4276	CLIP-seq
MIRT2652657	hsa-miR-4277	CLIP-seq
MIRT1461173	hsa-miR-4284	CLIP-seq
MIRT2652658	hsa-miR-4296	CLIP-seq
MIRT2652659	hsa-miR-4302	CLIP-seq
MIRT2652660	hsa-miR-4305	CLIP-seq
MIRT2652661	hsa-miR-4322	CLIP-seq
MIRT1461184	hsa-miR-4441	CLIP-seq
MIRT1461187	hsa-miR-4459	CLIP-seq
MIRT2652662	hsa-miR-4463	CLIP-seq
MIRT2652663	hsa-miR-448	CLIP-seq
MIRT2652664	hsa-miR-4499	CLIP-seq
MIRT2462600	hsa-miR-451b	CLIP-seq
MIRT2652665	hsa-miR-4526	CLIP-seq
MIRT1461194	hsa-miR-4530	CLIP-seq
MIRT1461195	hsa-miR-4649-3p	CLIP-seq
MIRT2652666	hsa-miR-4659a-3p	CLIP-seq
MIRT2652667	hsa-miR-4659b-3p	CLIP-seq
MIRT2652668	hsa-miR-4684-3p	CLIP-seq
MIRT1923048	hsa-miR-4688	CLIP-seq
MIRT1923049	hsa-miR-4689	CLIP-seq
MIRT2652669	hsa-miR-4694-3p	CLIP-seq
MIRT2652670	hsa-miR-4698	CLIP-seq
MIRT2462601	hsa-miR-4708-3p	CLIP-seq
MIRT1461204	hsa-miR-4728-5p	CLIP-seq
MIRT2652671	hsa-miR-4733-5p	CLIP-seq
MIRT2652672	hsa-miR-4747-5p	CLIP-seq
MIRT2652673	hsa-miR-4752	CLIP-seq
MIRT2652674	hsa-miR-4757-5p	CLIP-seq
MIRT2652675	hsa-miR-4760-5p	CLIP-seq
MIRT1461206	hsa-miR-4763-3p	CLIP-seq
MIRT2652676	hsa-miR-4764-3p	CLIP-seq
MIRT2462603	hsa-miR-4766-3p	CLIP-seq
MIRT2138502	hsa-miR-4767	CLIP-seq
MIRT2652677	hsa-miR-4773	CLIP-seq
MIRT2652678	hsa-miR-4778-3p	CLIP-seq
MIRT1923050	hsa-miR-4779	CLIP-seq
MIRT1923051	hsa-miR-4784	CLIP-seq
MIRT2652679	hsa-miR-4796-3p	CLIP-seq
MIRT2652680	hsa-miR-4800-5p	CLIP-seq
MIRT2652681	hsa-miR-4802-5p	CLIP-seq
MIRT1923052	hsa-miR-486-3p	CLIP-seq
MIRT2652682	hsa-miR-513a-3p	CLIP-seq
MIRT2652683	hsa-miR-519d	CLIP-seq
MIRT1461216	hsa-miR-548aa	CLIP-seq
MIRT2652684	hsa-miR-548ah	CLIP-seq
MIRT2652685	hsa-miR-548v	CLIP-seq
MIRT1923053	hsa-miR-552	CLIP-seq
MIRT2652686	hsa-miR-570	CLIP-seq
MIRT2652687	hsa-miR-578	CLIP-seq
MIRT2652688	hsa-miR-579	CLIP-seq
MIRT2652689	hsa-miR-581	CLIP-seq
MIRT2652690	hsa-miR-582-5p	CLIP-seq
MIRT2652691	hsa-miR-599	CLIP-seq
MIRT2652692	hsa-miR-613	CLIP-seq
MIRT2652693	hsa-miR-634	CLIP-seq
MIRT1461224	hsa-miR-665	CLIP-seq
MIRT2652694	hsa-miR-93	CLIP-seq
MIRT1461227	hsa-miR-940	CLIP-seq
MIRT2652627	hsa-miR-1	CLIP-seq
MIRT1461112	hsa-miR-1207-5p	CLIP-seq
MIRT2652631	hsa-miR-1257	CLIP-seq
MIRT1461116	hsa-miR-1273e	CLIP-seq
MIRT1461122	hsa-miR-141	CLIP-seq
MIRT1461127	hsa-miR-1827	CLIP-seq
MIRT1461128	hsa-miR-1976	CLIP-seq
MIRT1461129	hsa-miR-200a	CLIP-seq
MIRT2652640	hsa-miR-206	CLIP-seq
MIRT2652644	hsa-miR-217	CLIP-seq
MIRT1461133	hsa-miR-2964a-3p	CLIP-seq
MIRT1461135	hsa-miR-302f	CLIP-seq
MIRT1461138	hsa-miR-3122	CLIP-seq
MIRT2652645	hsa-miR-3138	CLIP-seq
MIRT1923043	hsa-miR-3150b-3p	CLIP-seq
MIRT1923044	hsa-miR-3184	CLIP-seq
MIRT1461153	hsa-miR-3622a-3p	CLIP-seq
MIRT1461154	hsa-miR-3622b-3p	CLIP-seq
MIRT2652650	hsa-miR-3673	CLIP-seq
MIRT1461159	hsa-miR-3689a-3p	CLIP-seq
MIRT1461160	hsa-miR-3689c	CLIP-seq
MIRT2652652	hsa-miR-3689d	CLIP-seq
MIRT1461161	hsa-miR-370	CLIP-seq
MIRT2138496	hsa-miR-3911	CLIP-seq
MIRT1461167	hsa-miR-3913-5p	CLIP-seq
MIRT1923045	hsa-miR-3918	CLIP-seq
MIRT1923047	hsa-miR-423-5p	CLIP-seq
MIRT1461171	hsa-miR-4270	CLIP-seq
MIRT2652656	hsa-miR-4276	CLIP-seq
MIRT2652659	hsa-miR-4302	CLIP-seq
MIRT1461184	hsa-miR-4441	CLIP-seq
MIRT1461187	hsa-miR-4459	CLIP-seq
MIRT2652663	hsa-miR-448	CLIP-seq
MIRT2462600	hsa-miR-451b	CLIP-seq
MIRT1461194	hsa-miR-4530	CLIP-seq
MIRT1461195	hsa-miR-4649-3p	CLIP-seq
MIRT1923048	hsa-miR-4688	CLIP-seq
MIRT1923049	hsa-miR-4689	CLIP-seq
MIRT2652669	hsa-miR-4694-3p	CLIP-seq
MIRT1461204	hsa-miR-4728-5p	CLIP-seq
MIRT2652672	hsa-miR-4747-5p	CLIP-seq
MIRT1461206	hsa-miR-4763-3p	CLIP-seq
MIRT2462603	hsa-miR-4766-3p	CLIP-seq
MIRT1923050	hsa-miR-4779	CLIP-seq
MIRT1923051	hsa-miR-4784	CLIP-seq
MIRT2652680	hsa-miR-4800-5p	CLIP-seq
MIRT2652681	hsa-miR-4802-5p	CLIP-seq
MIRT1923052	hsa-miR-486-3p	CLIP-seq
MIRT1461216	hsa-miR-548aa	CLIP-seq
MIRT2652686	hsa-miR-570	CLIP-seq
MIRT2652692	hsa-miR-613	CLIP-seq
MIRT1461224	hsa-miR-665	CLIP-seq
MIRT1461227	hsa-miR-940	CLIP-seq

Show/Hide all(8)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000922	Component	Spindle pole	IEA
GO:0005737	Component	Cytoplasm	IEA
GO:0005815	Component	Microtubule organizing center	IEA
GO:0007049	Process	Cell cycle	IEA
GO:0007346	Process	Regulation of mitotic cell cycle	IMP	23036704
GO:0019900	Function	Kinase binding	IPI	23036704
GO:0030496	Component	Midbody	IDA	23036704
GO:0051301	Process	Cell division	IEA

MIM	HGNC	e!Ensembl
615098	29179	ENSG00000100154

Protein

UniProt ID

Q96AY4

Protein name

Tetratricopeptide repeat protein 28 (TPR repeat protein 28) (TPR repeat-containing big gene cloned at Keio)

Protein function

During mitosis, may be involved in the condensation of spindle midzone microtubules, leading to the formation of midbody.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF13176	TPR_7	276 → 311	Tetratricopeptide repeat	Repeat
PF13424	TPR_12	311 → 386		Repeat
PF13424	TPR_12	351 → 426		Repeat
PF13424	TPR_12	472 → 546		Repeat
PF13424	TPR_12	552 → 626		Repeat
PF13424	TPR_12	636 → 706		Repeat
PF13424	TPR_12	713 → 786		Repeat
PF13424	TPR_12	832 → 909		Repeat
PF13424	TPR_12	915 → 989		Repeat
PF13424	TPR_12	995 → 1069		Repeat
PF13424	TPR_12	1075 → 1149		Repeat
PF12770	CHAT	1390 → 1713	CHAT domain	Domain

Tissue specificity

TISSUE SPECIFICITY: Widely expressed in fetal tissues. In adult tissues, expressed in testis and ovary and, at much lower levels, in kidney and pancreas. {ECO:0000269|PubMed:23036704}.

Sequence

MEQSPPPAPEPTQGPTPARSRRRREPESPPASAPIPLFGADTIGQRSPDGPVLSKAEFVE
KVRQSNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARL
LNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDSLE
PTYQQLQKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSAL
SSAYWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQ
LVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNM
GAVYIAMGDFENAVQCHEQHLKIAKDLGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYV
LELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNL
GIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQE
LQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNL
GNFHCSRGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQD
LALAKDLHDKLSQAKAYCNLGLAFKALLNFSKAEECQKYLLSLAQSLNNSQAKFRALGNL
GDIFICKKDINGAIKFYEQQLGLAHQVKDRRLEASAYAALGTAYRMIQKYDKALGYHTQE
LEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYEEQLDLGQKLKDPSLEAQVYGNM
GITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYY
EQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAY
GELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYH
QLDLQIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLAAKTVSY
SSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQL
YRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAF
ADLLVERQTGQQDSDPYSPVTIDQILEMVNGQRGLVLYYSLAAGYLYSWLLAPGAGIVKF
HEHYLGENTVENSSDFQASSSVTLPTATGSALEQHIASVREALGVESHYSRACASSETES
EAGDIMDQQFEEMNNKLNSVTDPTGFLRMVRRNNLFNRSCQSMTSLFSNTVSPTQDGTSS
LPRRQSSFAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGS
SSNEYLYERFGLLAVPSIRSLSVQSKSHLRKNPPTYSSSTSMAAVIGNPKLPSAVMDRWL
WGPMPSAEEEAYMVSELLGCQPLVGSVATKERVMSALTQAECVHFATHISWKLSALVLTP
SMDGNPASSKSSFGHPYTIPESLRVQDDASDGESISDCPPLQELLLTAADVLDLQLPVKL
VVLGSSQESNSKVTADGVIALTRAFLAAGAQCVLVSLWPVPVAASKMFIHAFYSSLLNGL
KASAALGEAMKVVQSSKAFSHPSNWAGFMLIGSDVKLNSPSSLIGQALTEILQHPERARD
ALRVLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPTSGLP
AAVFFPTSDPGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQLISRAVKNMVGML
HQVLVQLQAGEKEQDLASAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGK
QANRRTVHFALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNALPLGYQQPPFSPT
GADSIASDAISVYSLSSIASSMSFVSKPEGGSEGGGPGGRQDHDRSKNAYLQRSTLPRSQ
LPPQTRPAGNKDEEEYEGFSIISNEPLATYQENRNTCFSPDHKQPQPGTAGGMRVSVSSK
GSISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESNPKLDPQ
ELAQKILEETQSHLIAVERLQRSGGQVSKSNNPEDGVQAPSSTAVFRASETSAFSRPVLS
HQKSQPSPVTVKPKPPARSSSLPKVSSGYSSPTTSEMSIKDSPSQHSGRPSPGCDSQTSQ
LDQPLFKLKYPSSPYSAHISKSPRNMSPSSGHQSPAGSAPSPALSYSSAGSARSSPADAP
DIDKLKMAAIDEKVQAVHNLKMFWQSTPQHSTGPMKIFRGAPGTMTSKRDVLSLLNLSPR
HNKKEEGVDKLELKELSLQQHDGAPPKAPPNGHWRTETTSLGSLPLPAGPPATAPARPLR
LPSGNGYKFLSPGRFFPSSKC

Sequence length

2481

Interactions

View interactions

Show/Hide Causal Diseases (4)

Disease term	Disease name	dbSNP ID	References
Causal
Breast carcinoma	Breast Carcinoma	rs80359671, rs11540652, rs28934575, rs28897672, rs137886232, rs193922376, rs80357783, rs80359306, rs80359405, rs80359507, rs80359598, rs80358429, rs397507683, rs397515636, rs80359451 View all (71 more)	29059683
Obesity	Obesity	rs74315349, rs1474810899, rs121918111, rs796065034, rs753856820, rs796065035, rs121918112, rs104894023, rs137852821, rs1580764441, rs137852822, rs137852823, rs137852824, rs13447324, rs121913562 View all (27 more)	21552555
Prostate cancer	Prostate carcinoma, Prostate cancer, familial	rs121909139, rs121909140, rs121909141, rs121909142, rs121909143, rs606231169, rs606231170, rs137852584, rs137852578, rs137852580, rs137852581, rs137852582	29892016, 29117387
Prostate cancer, hereditary	PROSTATE CANCER, HEREDITARY, 1	rs387906327, rs193929331, rs74315365, rs397516896, rs794729219, rs121913349, rs587782641, rs1114167673, rs1597371666, rs2073394466	29892016

Show/Hide Unknown Diseases (10)

Disease term	Disease name	Evidence	Source
Unknown
Eczema	Eczema		GWAS
Gout	Gout		GWAS
Breast cancer	Breast cancer	Importantly, breast cancer patients bearing PRC2 LOF mutations displayed significantly worse prognosis compared with PRC2 wild-type patients	GWAS, CBGDA
Multiple Sclerosis	Multiple Sclerosis		GWAS
Ovarian cancer	Ovarian cancer	Conditional KD of IL6 in the OCCA xenograft model delays tumor growth	GWAS, CBGDA
Metabolic Syndrome	Metabolic Syndrome		GWAS
Uterine Fibroids	Uterine Fibroids		GWAS
Alzheimer disease	Alzheimer disease		GWAS
Asthma	Asthma		GWAS
Diabetes	Diabetes		GWAS

Show/Hide Text Mining Associations (12)

Disease Name	Relationship Type	References
Associations from Text Mining
Carcinoma Hepatocellular	Associate	36906605
Colorectal Neoplasms	Associate	24553397
Esophageal Neoplasms	Associate	28548104
Glaucoma	Associate	36982708
Multiple Sclerosis	Associate	36232761
Orofacial Cleft 1	Associate	26561393
Otofaciocervical Syndrome	Associate	26561393
Ovarian Neoplasms	Associate	20386703
Precursor Cell Lymphoblastic Leukemia Lymphoma	Associate	34106877
Syndrome	Associate	26633546
Urinary Bladder Neoplasms	Associate	33289830
Uveal melanoma	Associate	27745836

TTC28 (tetratricopeptide repeat domain 28)