Gene Gene information from NCBI Gene database.
Entrez ID 23294
Gene name Ankyrin repeat and sterile alpha motif domain containing 1A
Gene symbol ANKS1A
Synonyms (NCBI Gene)
ANKS1
Chromosome 6
Chromosome location 6p21.31
miRNA miRNA information provided by mirtarbase database.
594
miRTarBase ID miRNA Experiments Reference
MIRT049292 hsa-miR-92a-3p CLASH 23622248
MIRT717775 hsa-miR-6854-5p HITS-CLIP 19536157
MIRT717774 hsa-miR-5196-3p HITS-CLIP 19536157
MIRT717773 hsa-miR-6847-3p HITS-CLIP 19536157
MIRT717772 hsa-miR-3945 HITS-CLIP 19536157
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
12
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 15778465, 16273093, 24658140, 31980649, 35384245, 36931259
GO:0005654 Component Nucleoplasm IDA
GO:0005737 Component Cytoplasm IEA
GO:0005829 Component Cytosol IBA
GO:0005829 Component Cytosol IDA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
608994 20961 ENSG00000064999
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q92625
Protein name Ankyrin repeat and SAM domain-containing protein 1A (Odin)
Protein function Regulator of different signaling pathways. Regulates EPHA8 receptor tyrosine kinase signaling to control cell migration and neurite retraction (By similarity).
PDB 2LMR , 2MYQ , 6F7O
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00023 Ank 79 111 Ankyrin repeat Repeat
PF00023 Ank 112 147 Ankyrin repeat Repeat
PF00023 Ank 148 180 Ankyrin repeat Repeat
PF00023 Ank 215 246 Ankyrin repeat Repeat
PF00023 Ank 249 278 Ankyrin repeat Repeat
PF00536 SAM_1 696 760 SAM domain (Sterile alpha motif) Domain
PF00536 SAM_1 768 832 SAM domain (Sterile alpha motif) Domain
PF00640 PID 942 1068 Phosphotyrosine interaction domain (PTB/PID) Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed (at protein level).
Sequence
MGKEQELLEAARTGHLPAVEKLLSGKRLSSGFGGGGGGGSGGGGGGSGGGGGGLGSSSHP
LSSLLSMWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADSKGCYPLHLA
AWKGDAQIVRLLIHQGPSHTRVNEQNN
DNETALHCAAQYGHTEVVKVLLEELTDPTMRNN
KFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLAARNGHKAVVQVLLDAGMD
SNYQTE
MGSALHEAALFGKTDVVQILLAAGTDVNIKDNHGLTALDTVRELPSQKSQQIAA
LIEDHMTGKRSTKEVDKTPPPQPPLISSMDSISQKSQGDVEKAVTELIIDFDANAEEEGP
YEALYNAISCHSLDSMASGRSSDQDSTNKEAEAAGVKPAGVRPRERPPPPAKPPPDEEEE
DHIDKKYFPLTASEVLSMRPRIHGSAAREEDEHPYELLLTAETKKVVLVDGKTKDHRRSS
SSRSQDSAEGQDGQVPEQFSGLLHGSSPVCEVGQDPFQLLCTAGQSHPDGSPQQGACHKA
SMQLEETGVHAPGASQPSALDQSKRVGYLTGLPTTNSRSHPETLTHTASPHPGGAEEGDR
SGARSRAPPTSKPKAELKLSRSLSKSDSDLLTCSPTEDATMGSRSESLSNCSIGKKRLEK
SPSFASEWDEIEKIMSSIGEGIDFSQERQKISGLRTLEQSVGEWLESIGLQQYESKLLLN
GFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLLQAARSLP
KVKALGYDGNSPPSVPSWLD
SLGLQDYVHSFLSSGYSSIDTVKNLWELELVNVLKVQLLGHRKRIIASLADR
PYEEPPQK
PPRFSQLRCQDLLSQTSSPLSQNDSCTGRSADLLLPPGDTGRRRHDSLHDPAAPSRAERF
RIQEEHREAKLTLRPPSLAAPYAPVQSWQHQPEKLIFESCGYEANYLGSMLIKDLRGTES
TQDACAKMRKSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEHEIRNISCAAQDPEDLC
TFAYITKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQA
QKSRATGASAAE
MIETKSSKPVPKPRVGVRKSALEPPDMDQDAQSHASVSWVVDPKPDSKRSLSTN
Sequence length 1134
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
5
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Gastric cancer Benign rs34422534 RCV005905887
Malignant tumor of esophagus Benign rs34422534 RCV005905885
Melanoma Benign rs34422534 RCV005905889
Ovarian serous cystadenocarcinoma Benign rs34422534 RCV005905888
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Carcinoma Non Small Cell Lung Associate 23825523
Coronary Disease Associate 34515027
Lupus Erythematosus Systemic Associate 28108556