Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
23294
Gene name Gene Name - the full gene name approved by the HGNC.
Ankyrin repeat and sterile alpha motif domain containing 1A
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ANKS1A
Synonyms (NCBI Gene) Gene synonyms aliases
ANKS1
Chromosome Chromosome number
6
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
6p21.31
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT049292 hsa-miR-92a-3p CLASH 23622248
MIRT717775 hsa-miR-6854-5p HITS-CLIP 19536157
MIRT717774 hsa-miR-5196-3p HITS-CLIP 19536157
MIRT717773 hsa-miR-6847-3p HITS-CLIP 19536157
MIRT717772 hsa-miR-3945 HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 16273093, 24658140, 31980649
GO:0005654 Component Nucleoplasm IDA
GO:0005829 Component Cytosol IBA 21873635
GO:0005829 Component Cytosol IDA
GO:0006929 Process Substrate-dependent cell migration ISS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
608994 20961 ENSG00000064999
Protein
UniProt ID Q92625
Protein name Ankyrin repeat and SAM domain-containing protein 1A (Odin)
Protein function Regulator of different signaling pathways. Regulates EPHA8 receptor tyrosine kinase signaling to control cell migration and neurite retraction (By similarity).
PDB 2LMR , 2MYQ , 6F7O
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00023 Ank 79 111 Ankyrin repeat Repeat
PF00023 Ank 112 147 Ankyrin repeat Repeat
PF00023 Ank 148 180 Ankyrin repeat Repeat
PF00023 Ank 215 246 Ankyrin repeat Repeat
PF00023 Ank 249 278 Ankyrin repeat Repeat
PF00536 SAM_1 696 760 SAM domain (Sterile alpha motif) Domain
PF00536 SAM_1 768 832 SAM domain (Sterile alpha motif) Domain
PF00640 PID 942 1068 Phosphotyrosine interaction domain (PTB/PID) Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed (at protein level).
Sequence
MGKEQELLEAARTGHLPAVEKLLSGKRLSSGFGGGGGGGSGGGGGGSGGGGGGLGSSSHP
LSSLLSMWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADSKGCYPLHLA
AWKGDAQIVRLLIHQGPSHTRVNEQNN
DNETALHCAAQYGHTEVVKVLLEELTDPTMRNN
KFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLAARNGHKAVVQVLLDAGMD
SNYQTE
MGSALHEAALFGKTDVVQILLAAGTDVNIKDNHGLTALDTVRELPSQKSQQIAA
LIEDHMTGKRSTKEVDKTPPPQPPLISSMDSISQKSQGDVEKAVTELIIDFDANAEEEGP
YEALYNAISCHSLDSMASGRSSDQDSTNKEAEAAGVKPAGVRPRERPPPPAKPPPDEEEE
DHIDKKYFPLTASEVLSMRPRIHGSAAREEDEHPYELLLTAETKKVVLVDGKTKDHRRSS
SSRSQDSAEGQDGQVPEQFSGLLHGSSPVCEVGQDPFQLLCTAGQSHPDGSPQQGACHKA
SMQLEETGVHAPGASQPSALDQSKRVGYLTGLPTTNSRSHPETLTHTASPHPGGAEEGDR
SGARSRAPPTSKPKAELKLSRSLSKSDSDLLTCSPTEDATMGSRSESLSNCSIGKKRLEK
SPSFASEWDEIEKIMSSIGEGIDFSQERQKISGLRTLEQSVGEWLESIGLQQYESKLLLN
GFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLLQAARSLP
KVKALGYDGNSPPSVPSWLD
SLGLQDYVHSFLSSGYSSIDTVKNLWELELVNVLKVQLLGHRKRIIASLADR
PYEEPPQK
PPRFSQLRCQDLLSQTSSPLSQNDSCTGRSADLLLPPGDTGRRRHDSLHDPAAPSRAERF
RIQEEHREAKLTLRPPSLAAPYAPVQSWQHQPEKLIFESCGYEANYLGSMLIKDLRGTES
TQDACAKMRKSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEHEIRNISCAAQDPEDLC
TFAYITKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQA
QKSRATGASAAE
MIETKSSKPVPKPRVGVRKSALEPPDMDQDAQSHASVSWVVDPKPDSKRSLSTN
Sequence length 1134
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Coronary artery disease Coronary Artery Disease rs137852988, rs121918313, rs121918529, rs121918531, rs137852340, rs1555800701, rs1215189537 21378990
Unknown
Disease term Disease name Evidence References Source
Coronary heart disease Coronary heart disease 21378990 ClinVar
Coronary Heart Disease Coronary Heart Disease GWAS
Systemic lupus erythematosus Systemic lupus erythematosus GWAS
Metabolic Syndrome Metabolic Syndrome GWAS
Associations from Text Mining
Disease Name Relationship Type References
Carcinoma Non Small Cell Lung Associate 23825523
Coronary Disease Associate 34515027
Lupus Erythematosus Systemic Associate 28108556