Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
23220
Gene name Gene Name - the full gene name approved by the HGNC.
Deltex E3 ubiquitin ligase 4
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
DTX4
Synonyms (NCBI Gene) Gene synonyms aliases
RNF155
Chromosome Chromosome number
11
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11q12.1
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT027766 hsa-miR-98-5p Microarray 19088304
MIRT715184 hsa-miR-130a-3p HITS-CLIP 19536157
MIRT715183 hsa-miR-130b-3p HITS-CLIP 19536157
MIRT715182 hsa-miR-301a-3p HITS-CLIP 19536157
MIRT715181 hsa-miR-301b-3p HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004842 Function Ubiquitin-protein transferase activity TAS
GO:0005654 Component Nucleoplasm IBA 21873635
GO:0005829 Component Cytosol TAS
GO:0007219 Process Notch signaling pathway IBA 21873635
GO:0008270 Function Zinc ion binding IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
616110 29151 ENSG00000110042
Protein
UniProt ID Q9Y2E6
Protein name E3 ubiquitin-protein ligase DTX4 (EC 2.3.2.27) (Protein deltex-4) (Deltex4) (RING finger protein 155) (RING-type E3 ubiquitin transferase DTX4)
Protein function Regulator of Notch signaling, a signaling pathway involved in cell-cell communications that regulates a broad spectrum of cell-fate determinations (By similarity). Functions as a ubiquitin ligase protein in vivo, mediating 'Lys48'-linked polyubi
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02825 WWE 8 78 WWE domain Family
PF02825 WWE 91 155 WWE domain Family
PF00097 zf-C3HC4 409 467 Zinc finger, C3HC4 type (RING finger) Domain
PF18102 DTC 475 609 Deltex C-terminal domain Domain
Sequence
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVVRAGPRAGGSVVLGQVDSRLAPYIIDL
QSMNQFRQDTGTLRPVRR
NYYDPSSAPGKGVVWEWENDNGSWTPYDMEVGITIQHAYEKQ
HPWIDLTSIGFSYVIDFNTMGQINRQTQRQRRVRR
RLDLIYPMVTGTLPKAQSWPVSPGP
ATSPPMSPCSCPQCVLVMSVKAAVVNGSTGPLQLPVTRKNMPPPGVVKLPPLPGSGAKPL
DSTGTIRGPLKTAPSQVIRRQASSMPTGTTMGSPASPPGPNSKTGRVALATLNRTNLQRL
AIAQSRVLIASGVPTVPVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPP
VSKSEIKSIPGVSNTSRKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLTAPS
GYKGPQPTVKPDLVGKLSRCGHVYHIYCLVAMYNNGNKDGSLQCPTC
KTIYGVKTGTQPP
GKMEYHLIPHSLPGHPDCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKG
RKVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNV
LAELAAQGI
SEDSTAQEKD
Sequence length 619
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Notch signaling pathway   IRF3 mediated activation of type 1 IFN
Activated NOTCH1 Transmits Signal to the Nucleus
Regulation of innate immune responses to cytosolic DNA
IRF3-mediated induction of type I IFN
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Adenocarcinoma Adenoid Cystic Carcinoma rs121913530, rs886039394, rs121913474 23685749
Associations from Text Mining
Disease Name Relationship Type References
Macular Degeneration Associate 34646884
Nasopharyngeal Carcinoma Associate 27350400