Gene Gene information from NCBI Gene database.
Entrez ID 2322
Gene name Fms related receptor tyrosine kinase 3
Gene symbol FLT3
Synonyms (NCBI Gene)
CD135FLK-2FLK2STK1
Chromosome 13
Chromosome location 13q12.2
Summary This gene encodes a class III receptor tyrosine kinase that regulates hematopoiesis. This receptor is activated by binding of the fms-related tyrosine kinase 3 ligand to the extracellular domain, which induces homodimer formation in the plasma membrane le
SNPs SNP information provided by dbSNP.
32
SNP ID Visualize variation Clinical significance Consequence
rs121909646 T>A,G Pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs121913232 G>C Pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs121913486 ATC>- Pathogenic-likely-pathogenic Inframe deletion, non coding transcript variant, coding sequence variant
rs121913487 A>C,T Pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs121913488 C>A,G,T Pathogenic Missense variant, non coding transcript variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
25
miRTarBase ID miRNA Experiments Reference
MIRT007053 hsa-miR-150-5p Luciferase reporter assay 23079661
MIRT017462 hsa-miR-335-5p Microarray 18185580
MIRT999065 hsa-miR-15a CLIP-seq
MIRT999066 hsa-miR-15b CLIP-seq
MIRT999067 hsa-miR-16 CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
PML Activation 17124055
STAT3 Activation 16418395
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
60
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0001776 Process Leukocyte homeostasis ISS
GO:0002318 Process Myeloid progenitor cell differentiation ISS
GO:0002328 Process Pro-B cell differentiation ISS
GO:0004672 Function Protein kinase activity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
136351 3765 ENSG00000122025
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P36888
Protein name Receptor-type tyrosine-protein kinase FLT3 (EC 2.7.10.1) (FL cytokine receptor) (Fetal liver kinase-2) (FLK-2) (Fms-like tyrosine kinase 3) (FLT-3) (Stem cell tyrosine kinase 1) (STK-1) (CD antigen CD135)
Protein function Tyrosine-protein kinase that acts as a cell-surface receptor for the cytokine FLT3LG and regulates differentiation, proliferation and survival of hematopoietic progenitor cells and of dendritic cells. Promotes phosphorylation of SHC1 and AKT1, a
PDB 1RJB , 3QS7 , 3QS9 , 4RT7 , 4XUF , 5X02 , 6IL3 , 6JQR , 7QDP , 7ZV9 , 8XB1
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00047 ig 255 345 Immunoglobulin domain Domain
PF07714 PK_Tyr_Ser-Thr 610 943 Protein tyrosine and serine/threonine kinase Domain
Tissue specificity TISSUE SPECIFICITY: Detected in bone marrow, in hematopoietic stem cells, in myeloid progenitor cells and in granulocyte/macrophage progenitor cells (at protein level). Detected in bone marrow, liver, thymus, spleen and lymph node, and at low levels in ki
Sequence
MPALARDGGQLPLLVVFSAMIFGTITNQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESP
EDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDL
QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQD
ALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRE
CTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEM
STYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIV
EKGFINATNSSEDYE
IDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHA
ENDDAQFTKMFTLNIRRKPQVLAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITE
GVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFPFIQD
NISFYATIGVCLLFIVVLTLLICHKYKKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYD
LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS
ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFHRTWTEIFKE
HNFSFYPTFQSHPNSSMPGSREVQIHPDSDQISGLHGNSFHSEDEIEYENQKRLEEEEDL
NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS
NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK
LIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL
GCQLADAEEAMYQNVDG
RVSECPHTYQNRRPFSREMDLGLLSPQAQVEDS
Sequence length 993
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  MAPK signaling pathway
Ras signaling pathway
PI3K-Akt signaling pathway
Hematopoietic cell lineage
Pathways in cancer
Transcriptional misregulation in cancer
Acute myeloid leukemia
Central carbon metabolism in cancer
  PI3K Cascade
RAF/MAP kinase cascade
FLT3 Signaling
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
40
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute lymphoid leukemia Pathogenic rs121909646, rs121913488, rs587776834 RCV000017661
RCV000017666
RCV000017668
Acute myeloid leukemia Likely pathogenic; Pathogenic rs2137622655, rs398122514, rs121909646, rs121913488, rs121913486, rs121913487, rs121913491 RCV003314385
RCV000017659
RCV000017660
RCV000017662
RCV000017663
RCV000017665
RCV000017667
RCV000424615
RCV006252530
Multiple myeloma Likely pathogenic rs1208575764 RCV000984136
Myelodysplastic syndrome progressed to acute myeloid leukemia Pathogenic rs864321619 RCV000203482
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Cervical cancer Benign rs80133756 RCV005918448
Cholangiocarcinoma Benign rs2491225 RCV005923653
Familial cancer of breast Benign; Likely benign rs2491225, rs56300022 RCV005923652
RCV005907685
FLT3-related disorder Benign; Likely benign rs34374211, rs35602083, rs141860068, rs371992934, rs201256911, rs61729144, rs41291684 RCV003980769
RCV003915207
RCV003964075
RCV003949779
RCV003949452
RCV003958181
RCV003968234
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Abnormalities Drug Induced Associate 16938118, 25441683
Acute erythroleukemia Associate 11091200, 12036858, 28108543
Adenocarcinoma Associate 26315110, 26317919, 36357817, 36670542
Adenocarcinoma Follicular Associate 16570574
Adenocarcinoma of Lung Associate 32337264, 38327131
Adenoma Associate 16570574, 31248021
Adenosarcoma of the uterus Associate 28690098
Alcoholic Intoxication Stimulate 35281004
Androgen Insensitivity Syndrome Associate 16912228, 34876631
Anemia Hemolytic Associate 29859851