Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
2317
Gene name Gene Name - the full gene name approved by the HGNC.
Filamin B
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
FLNB
Synonyms (NCBI Gene) Gene synonyms aliases
ABP-278, ABP-280, AOI, FH1, FLN-B, FLN1L, LRS1, SCT, TABP, TAP
Disease Acronyms (UniProt) Disease acronyms from UniProt database
SCT
Chromosome Chromosome number
3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
3p14.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the filamin family. The encoded protein interacts with glycoprotein Ib alpha as part of the process to repair vascular injuries. The platelet glycoprotein Ib complex includes glycoprotein Ib alpha, and it binds the actin cyto
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs28937587 G>C Pathogenic, likely-pathogenic Missense variant, coding sequence variant
rs77934864 C>T Conflicting-interpretations-of-pathogenicity Synonymous variant, coding sequence variant
rs80356493 T>A,G Pathogenic Missense variant, coding sequence variant
rs80356494 T>A,G Pathogenic Missense variant, coding sequence variant
rs80356495 G>T Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT020752 hsa-miR-155-5p Proteomics 18668040
MIRT021361 hsa-miR-9-5p Microarray 17612493
MIRT023750 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT051871 hsa-let-7c-5p CLASH 23622248
MIRT049532 hsa-miR-92a-3p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0003723 Function RNA binding HDA 22681889
GO:0003779 Function Actin binding NAS 8327473
GO:0005515 Function Protein binding IPI 10644691, 10676904, 12393796, 12577067, 16076904, 17474147, 19270716
GO:0005634 Component Nucleus IEA
GO:0005737 Component Cytoplasm HDA 16791210
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
603381 3755 ENSG00000136068
Protein
UniProt ID O75369
Protein name Filamin-B (FLN-B) (ABP-278) (ABP-280 homolog) (Actin-binding-like protein) (Beta-filamin) (Filamin homolog 1) (Fh1) (Filamin-3) (Thyroid autoantigen) (Truncated actin-binding protein) (Truncated ABP)
Protein function Connects cell membrane constituents to the actin cytoskeleton. May promote orthogonal branching of actin filaments and links actin filaments to membrane glycoproteins. Anchors various transmembrane proteins to the actin cytoskeleton. Interaction
PDB 2DI8 , 2DI9 , 2DIA , 2DIB , 2DIC , 2DJ4 , 2DLG , 2DMB , 2DMC , 2E9I , 2E9J , 2EE6 , 2EE9 , 2EEA , 2EEB , 2EEC , 2EED , 2WA5 , 2WA6 , 2WA7 , 3FER , 4B7L , 5DCP
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00307 CH 16 123 Calponin homology (CH) domain Domain
PF00307 CH 139 243 Calponin homology (CH) domain Domain
PF00630 Filamin 251 344 Filamin/ABP280 repeat Domain
PF00630 Filamin 351 443 Filamin/ABP280 repeat Domain
PF00630 Filamin 449 540 Filamin/ABP280 repeat Domain
PF00630 Filamin 546 633 Filamin/ABP280 repeat Domain
PF00630 Filamin 642 733 Filamin/ABP280 repeat Domain
PF00630 Filamin 739 836 Filamin/ABP280 repeat Domain
PF00630 Filamin 842 935 Filamin/ABP280 repeat Domain
PF00630 Filamin 941 1031 Filamin/ABP280 repeat Domain
PF00630 Filamin 1037 1124 Filamin/ABP280 repeat Domain
PF00630 Filamin 1130 1219 Filamin/ABP280 repeat Domain
PF00630 Filamin 1225 1319 Filamin/ABP280 repeat Domain
PF00630 Filamin 1325 1412 Filamin/ABP280 repeat Domain
PF00630 Filamin 1418 1508 Filamin/ABP280 repeat Domain
PF00630 Filamin 1514 1605 Filamin/ABP280 repeat Domain
PF00630 Filamin 1611 1701 Filamin/ABP280 repeat Domain
PF00630 Filamin 1735 1813 Filamin/ABP280 repeat Domain
PF00630 Filamin 1818 1905 Filamin/ABP280 repeat Domain
PF00630 Filamin 1999 2086 Filamin/ABP280 repeat Domain
PF00630 Filamin 2098 2182 Filamin/ABP280 repeat Domain
PF00630 Filamin 2190 2277 Filamin/ABP280 repeat Domain
PF00630 Filamin 2286 2372 Filamin/ABP280 repeat Domain
PF00630 Filamin 2381 2468 Filamin/ABP280 repeat Domain
PF00630 Filamin 2509 2598 Filamin/ABP280 repeat Domain
Tissue specificity TISSUE SPECIFICITY: Ubiquitous. Isoform 1 and isoform 2 are expressed in placenta, bone marrow, brain, umbilical vein endothelial cells (HUVEC), retina and skeletal muscle. Isoform 1 is predominantly expressed in prostate, uterus, liver, thyroid, stomach,
Sequence
MPVTEKDLAEDAPWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQK
RMYRKYHQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILH
YSI
SMPVWEDEGDDDAKKQTPKQRLLGWIQNKIPYLPITNFNQNWQDGKALGALVDSCAP
GLCPDWESWDPQKPVDNAREAMQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQFPKA
KLK
PGAPLKPKLNPKKARAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPEGNK
EEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAGQHISKSPFE
VSVDKAQGDASKVTAK
GPGLEAVGNIANKPTYFDIYTAGAGVGDIGVEVEDPQGKNTVELLVEDKGNQVYRCVYKP
MQPGPHVVKIFFAGDTIPKSPFV
VQVGEACNPNACRASGRGLQPKGVRIRETTDFKVDTK
AAGSGELGVTMKGPKGLEELVKQKDFLDGVYAFEYYPSTPGRYSIAITWGGHHIPKSPFE

VQVGPEAGMQKVRAWGPGLHGGIVGRSADFVVESIGSEVGSLGFAIEGPSQAKIEYNDQN
DGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYM
AFIHPATGGYNPDLVRAYGPGLEKSGC
IVNNLAEFTVDPKDAGKAPLKIFAQDGEGQRIDIQMKNRMDGTYACSYTPVKAIKHTIAV
VWGGVNIPHSPYR
VNIGQGSHPQKVKVFGPGVERSGLKANEPTHFTVDCTEAGEGDVSVG
IKCDARVLSEDEEDVDFDIIHNANDTFTVKYVPPAAGRYTIKVLFASQEIPASPFR
VKVD
PSHDASKVKAEGPGLSKAGVENGKPTHFTVYTKGAGKAPLNVQFNSPLPGDAVKDLDIID
NYDYSHTVKYTPTQQGNMQVLVTYGGDPIPKSPFT
VGVAAPLDLSKIKLNGLENRVEVGK
DQEFTVDTRGAGGQGKLDVTILSPSRKVVPCLVTPVTGRENSTAKFIPREEGLYAVDVTY
DGHPVPGSPYT
VEASLPPDPSKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGGLGLTVEGP
CEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFK
ADIEMPFDPSKVVASG
PGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAG
MYTLTMKYGGELVPHFPAR
VKVEPAVDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQ
VGGDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFK
V
AVTEGCQPSRVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLGITVEGPSESKINCRDNKD
GSCSAEYIPFAPGDYDVNITYGGAHIPGSPFR
VPVKDVVDPSKVKIAGPGLGSGVRARVL
QSFTVDSSKAGLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADE
EIPRSPFK
VKVLPTYDASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQITDQE
GKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYR
IRATQTGDASKCLAT
GPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAK
PGTYVIYVRFGGVDIPNSPFT
VMATDGEVTAVEEAPVNACPPGFRPWVTEEAYVPVSDMN
GLGFKPFDLVIPFAVRKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHI
KYMGSHIPESPLQ
FYVNYPNSGSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEG
PSKAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFT
AKITDDSRRCSQVKL
GSAADFLLDISETDLSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKK
NGNHVANSPVSIMVVQSEIGDARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVE
GPSKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFT
VKISGEGRVKESIT
RTSRAPSVATVGSICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQ
EMGVHTVSVKYRGQHVTGSPFQ
FTVGPLGEGGAHKVRAGGPGLERGEAGVPAEFSIWTRE
AGAGGLSIAVEGPSKAEITFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYL
VPV
IAPSDDARRLTVMSLQESGLKVNQPASFAIRLNGAKGKIDAKVHSPSGAVEECHVSELEP
DKYAVRFIPHENGVHTIDVKFNGSHVVGSPFK
VRVGEPGQAGNPALVSAYGTGLEGGTTG
IQSEFFINTTRAGPGTLSVTIEGPSKVKMDCQETPEGYKVMYTPMAPGNYLISVKYGGPN
HIVGSPFK
AKVTGQRLVSPGSANETSSILVESVTRSSTETCYSAIPKASSDASKVTSKGA
GLSKAFVGQKSSFLVDCSKAGSNMLLIGVHGPTTPCEEVSMKHVGNQQYNVTYVVKERGD
YVLAVKWGEEHIPGSPFH
VTVP
Sequence length 2602
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Focal adhesion   ISG15 antiviral mechanism
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Aortic aneurysm Aortic Aneurysm rs1555554098, rs267606902, rs121434526, rs121434527, rs121434528, rs387906592, rs387906781, rs387906782, rs397516685, rs397514037, rs112901682, rs397515325, rs397515330, rs794728025, rs112602953
View all (29 more)
Atelosteogenesis Atelosteogenesis, type 1, Atelosteogenesis Type 3, Atelosteogenesis type I, Atelosteogenesis type III rs386833498, rs786200881, rs104893915, rs104893924, rs121908894, rs121908895, rs28937587, rs386833495, rs386833499, rs121908077, rs587777259, rs875989951, rs1057517523, rs1057517496, rs1057517462
View all (18 more)
14991055
Atrial septal defect Atrial Septal Defects rs137852951, rs137852953, rs137852955, rs267607106, rs104893900, rs104893901, rs104893903, rs606231358, rs606231359, rs137852683, rs606231360, rs104893907, rs104894073, rs1585703301, rs104894074
View all (25 more)
Boomerang dysplasia Boomerang dysplasia rs80356494, rs121908896 14991055, 15994868
Unknown
Disease term Disease name Evidence References Source
Pulmonary hypoplasia Congenital hypoplasia of lung ClinVar
Boomerang Dysplasia Boomerang dysplasia GenCC
Glaucoma Glaucoma GWAS
Breast Cancer Breast Cancer Importantly, breast cancer patients bearing PRC2 LOF mutations displayed significantly worse prognosis compared with PRC2 wild-type patients GWAS, CBGDA
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 37552140
Antisocial Personality Disorder Associate 25918995
Atelosteogenesis type 1 Associate 24624349, 35832491
Atypical Hemolytic Uremic Syndrome Associate 21868097
Bare Lymphocyte Syndrome Type I Associate 12149238
Bone Diseases Metabolic Associate 24176111
Boomerang dysplasia Associate 29797497, 35832491
Breast Neoplasms Associate 32420379
Carcinogenesis Associate 32323860
Carcinoma Embryonal Associate 9420627