Gene Gene information from NCBI Gene database.
Entrez ID 2316
Gene name Filamin A
Gene symbol FLNA
Synonyms (NCBI Gene)
ABP-280ABPXCSBSCVD1FGS2FLNFLN-AFLN1FMDMNSNHBPOPDOPD1OPD2XLVDXMVD
Chromosome X
Chromosome location Xq28
Summary The protein encoded by this gene is an actin-binding protein that crosslinks actin filaments and links actin filaments to membrane glycoproteins. The encoded protein is involved in remodeling the cytoskeleton to effect changes in cell shape and migration.
SNPs SNP information provided by dbSNP.
178
SNP ID Visualize variation Clinical significance Consequence
rs28935169 T>A Pathogenic Coding sequence variant, missense variant
rs28935469 G>A Pathogenic Coding sequence variant, missense variant
rs28935470 C>T Pathogenic Coding sequence variant, missense variant
rs28935471 T>G Pathogenic Coding sequence variant, missense variant
rs28935472 C>T Pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
244
miRTarBase ID miRNA Experiments Reference
MIRT020648 hsa-miR-155-5p Proteomics 18668040
MIRT023757 hsa-miR-1-3p Proteomics 18668040
MIRT023757 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT025777 hsa-miR-7-5p Microarray 19073608
MIRT052184 hsa-let-7b-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
92
GO ID Ontology Definition Evidence Reference
GO:0001664 Function G protein-coupled receptor binding IPI 26460884
GO:0002102 Component Podosome IEA
GO:0002102 Component Podosome ISS
GO:0003723 Function RNA binding HDA 22658674, 22681889
GO:0003779 Function Actin binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
300017 3754 ENSG00000196924
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P21333
Protein name Filamin-A (FLN-A) (Actin-binding protein 280) (ABP-280) (Alpha-filamin) (Endothelial actin-binding protein) (Filamin-1) (Non-muscle filamin)
Protein function Promotes orthogonal branching of actin filaments and links actin filaments to membrane glycoproteins. Anchors various transmembrane proteins to the actin cytoskeleton and serves as a scaffold for a wide range of cytoplasmic signaling proteins. I
PDB 2AAV , 2BP3 , 2BRQ , 2J3S , 2JF1 , 2K3T , 2K7P , 2K7Q , 2MTP , 2W0P , 2WFN , 3CNK , 3HOC , 3HOP , 3HOR , 3ISW , 3RGH , 4M9P , 4P3W , 5XR1 , 6D8C , 6EW1 , 7SC4 , 7SFT , 9LWX , 9LXG
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00307 CH 43 150 Calponin homology (CH) domain Domain
PF00307 CH 166 270 Calponin homology (CH) domain Domain
PF00630 Filamin 278 371 Filamin/ABP280 repeat Domain
PF00630 Filamin 378 471 Filamin/ABP280 repeat Domain
PF00630 Filamin 477 567 Filamin/ABP280 repeat Domain
PF00630 Filamin 573 660 Filamin/ABP280 repeat Domain
PF00630 Filamin 669 760 Filamin/ABP280 repeat Domain
PF00630 Filamin 766 863 Filamin/ABP280 repeat Domain
PF00630 Filamin 869 962 Filamin/ABP280 repeat Domain
PF00630 Filamin 968 1058 Filamin/ABP280 repeat Domain
PF00630 Filamin 1064 1151 Filamin/ABP280 repeat Domain
PF00630 Filamin 1157 1246 Filamin/ABP280 repeat Domain
PF00630 Filamin 1252 1346 Filamin/ABP280 repeat Domain
PF00630 Filamin 1352 1439 Filamin/ABP280 repeat Domain
PF00630 Filamin 1445 1536 Filamin/ABP280 repeat Domain
PF00630 Filamin 1542 1633 Filamin/ABP280 repeat Domain
PF00630 Filamin 1639 1737 Filamin/ABP280 repeat Domain
PF00630 Filamin 1773 1857 Filamin/ABP280 repeat Domain
PF00630 Filamin 1862 1949 Filamin/ABP280 repeat Domain
PF00630 Filamin 2044 2131 Filamin/ABP280 repeat Domain
PF00630 Filamin 2143 2227 Filamin/ABP280 repeat Domain
PF00630 Filamin 2235 2322 Filamin/ABP280 repeat Domain
PF00630 Filamin 2329 2417 Filamin/ABP280 repeat Domain
PF00630 Filamin 2426 2513 Filamin/ABP280 repeat Domain
PF00630 Filamin 2554 2643 Filamin/ABP280 repeat Domain
Tissue specificity TISSUE SPECIFICITY: Ubiquitous.
Sequence
MSSSHSRAGQSAAGAAPGGGVDTRDAEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCV
SKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIK
LVSIDSKAIVDGNLKLILGLIWTLILHYSI
SMPMWDEEEDEEAKKQTPKQRLLGWIQNKL
PQLPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQ
VITPEEIVDPNVDEHSVMTYLSQFPKAKLK
PGAPLRPKLNPKKARAYGPGIEPTGNMVKK
RAEFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTFSVWYVPEVTGTHKVTVLF
AGQHIAKSPFE
VYVDKSQGDASKVTAQGPGLEPSGNIANKTTYFEIFTAGAGTGEVEVVI
QDPMGQKGTVEPQLEARGDSTYRCSYQPTMEGVHTVHVTFAGVPIPRSPYT
VTVGQACNP
SACRAVGRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKGEERVKQKDLGDGVYGF
EYYPMVPGTYIVTITWGGQNIGRSPFE
VKVGTECGNQKVRAWGPGLEGGVVGKSADFVVE
AIGDDVGTLGFSVEGPSQAKIECDDKGDGSCDVRYWPQEAGEYAVHVLCNSEDIRLSPFM

ADIRDAPQDFHPDRVKARGPGLEKTGVAVNKPAEFTVDAKHGGKAPLRVQVQDNEGCPVE
ALVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFR
VNVGAGSHPNKVKVYGPGVA
KTGLKAHEPTYFTVDCAEAGQGDVSIGIKCAPGVVGPAEADIDFDIIRNDNDTFTVKYTP
RGAGSYTIMVLFADQATPTSPIR
VKVEPSHDASKVKAEGPGLSRTGVELGKPTHFTVNAK
AAGKGKLDVQFSGLTKGDAVRDVDIIDHHDNTYTVKYTPVQQGPVGVNVTYGGDPIPKSP
FS
VAVSPSLDLSKIKVSGLGEKVDVGKDQEFTVKSKGAGGQGKVASKIVGPSGAAVPCKV
EPGLGADNSVVRFLPREEGPYEVEVTYDGVPVPGSPFP
LEAVAPTKPSKVKAFGPGLQGG
SAGSPARFTIDTKGAGTGGLGLTVEGPCEAQLECLDNGDGTCSVSYVPTEPGDYNINILF
ADTHIPGSPFK
AHVVPCFDASKVKCSGPGLERATAGEVGQFQVDCSSAGSAELTIEICSE
AGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSK
LQVEPAVDTSGVQC
YGPGIEGQGVFREATTEFSVDARALTQTGGPHVKARVANPSGNLTETYVQDRGDGMYKVE
YTPYEEGLHSVDVTYDGSPVPSSPFQ
VPVTEGCDPSRVRVHGPGIQSGTTNKPNKFTVET
RGAGTGGLGLAVEGPSEAKMSCMDNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFK
V
PVHDVTDASKVKCSGPGLSPGMVRANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEPVDVV
DNADGTQTVNYVPSREGPYSISVLYGDEEVPRSPFK
VKVLPTHDASKVKASGPGLNTTGV
PASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAYVPDVTGRYTILI
KYGGDEIPFSPYR
VRAVPTGDASKCTVTVSIGGHGLGAGIGPTIQIGEETVITVDTKAAG
KGKVTCTVCTPDGSEVDVDVVENEDGTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQ
VTA
LAGDQPSVQPPLRSQQLAPQYTYAQGGQQTWAPERPLVGVNGLDVTSLRPFDLVIPFTIK
KGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIPGSPLQ
FYV
DYVNCGHVTAYGPGLTHGVVNKPATFTVNTKDAGEGGLSLAIEGPSKAEISCTDNQDGTC
SVSYLPVLPGDYSILVKYNEQHVPGSPFT
ARVTGDDSMRMSHLKVGSAADIPINISETDL
SLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVASSPIPVVIS
QSEIGDASRVRVSGQGLHEGHTFEPAEFIIDTRDAGYGGLSLSIEGPSKVDINTEDLEDG
TCRVTYCPTEPGNYIINIKFADQHVPGSPFS
VKVTGEGRVKESITRRRRAPSVANVGSHC
DLSLKIPEISIQDMTAQVTSPSGKTHEAEIVEGENHTYCIRFVPAEMGTHTVSVKYKGQH
VPGSPFQ
FTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTREAGAGGLAIAVEGPSK
AEISFEDRKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFV
VPVASPSGDARRLTVSSL
QESGLKVNQPASFAVSLNGAKGAIDAKVHSPSGALEECYVTEIDQDKYAVRFIPRENGVY
LIDVKFNGTHIPGSPFK
IRVGEPGHGGDPGLVSAYGAGLEGGVTGNPAEFVVNTSNAGAG
ALSVTIDGPSKVKMDCQECPEGYRVTYTPMAPGSYLISIKYGGPYHIGGSPFK
AKVTGPR
LVSNHSLHETSSVFVDSLTKATCAPQHGAPGPGPADASKVVAKGLGLSKAYVGQKSSFTV
DCSKAGNNMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGDEHIPGS
PYR
VVVP
Sequence length 2647
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  MAPK signaling pathway
Focal adhesion
Salmonella infection
Proteoglycans in cancer
  Platelet degranulation
GP1b-IX-V activation signalling
Cell-extracellular matrix interactions
RHO GTPases activate PAKs
OAS antiviral response
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
12853
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormal cerebral morphology Pathogenic rs2148106461 RCV002275907
Abnormality of the face Likely pathogenic; Pathogenic rs398123614 RCV002226662
Arterial thrombosis Likely pathogenic rs1557175789 RCV000626750
Arterial tortuosity Likely pathogenic rs1557175789 RCV000626750
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormal bleeding Benign; Likely benign rs187029309 RCV001270494
Abnormality of neuronal migration Conflicting classifications of pathogenicity rs369717556 RCV000201336
Ambiguous genitalia Uncertain significance rs2148119358 RCV002243573
Aortic aneurysm, familial thoracic 2 Conflicting classifications of pathogenicity rs200615848 RCV000584552
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Achondroplasia Associate 32814550
Acromegaly Associate 30718563
Adenocarcinoma Associate 25944616
Adenocarcinoma Inhibit 39764579
Adenocarcinoma of Lung Associate 29272322
Adrenocortical Carcinoma Associate 38068896
Aneurysm Associate 36372407
Anorchia Associate 16417552
Aortic Aneurysm Associate 36372407
Aortic Aneurysm Thoracic Associate 29334594