Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	22997
Gene name Gene Name - the full gene name approved by the HGNC.	Immunoglobulin superfamily member 9B
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	IGSF9B
Synonyms (NCBI Gene) Gene synonyms aliases	LINC00947, MIR4697HG
Chromosome Chromosome number	11
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	11q25

Show/Hide all(271)

miRTarBase ID	miRNA	Experiments	Reference
MIRT047733	hsa-miR-10a-5p	CLASH	23622248
MIRT694587	hsa-miR-625-3p	HITS-CLIP	23313552
MIRT694586	hsa-miR-1295b-3p	HITS-CLIP	23313552
MIRT694585	hsa-miR-455-5p	HITS-CLIP	23313552
MIRT694584	hsa-miR-6872-3p	HITS-CLIP	23313552
MIRT694583	hsa-miR-4487	HITS-CLIP	23313552
MIRT694582	hsa-miR-3199	HITS-CLIP	23313552
MIRT694581	hsa-miR-8052	HITS-CLIP	23313552
MIRT694580	hsa-miR-365a-5p	HITS-CLIP	23313552
MIRT694579	hsa-miR-365b-5p	HITS-CLIP	23313552
MIRT694578	hsa-miR-1227-3p	HITS-CLIP	23313552
MIRT694577	hsa-miR-4715-3p	HITS-CLIP	23313552
MIRT694576	hsa-miR-129-5p	HITS-CLIP	23313552
MIRT647624	hsa-miR-548c-3p	HITS-CLIP	23824327
MIRT647623	hsa-miR-4668-3p	HITS-CLIP	23824327
MIRT647622	hsa-miR-3613-3p	HITS-CLIP	23824327
MIRT647621	hsa-miR-500b-3p	HITS-CLIP	23824327
MIRT647620	hsa-miR-4690-3p	HITS-CLIP	23824327
MIRT647619	hsa-miR-5685	HITS-CLIP	23824327
MIRT647618	hsa-miR-7110-3p	HITS-CLIP	23824327
MIRT647617	hsa-miR-6817-3p	HITS-CLIP	23824327
MIRT647616	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT647615	hsa-miR-627-3p	HITS-CLIP	23824327
MIRT647614	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT647613	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT647612	hsa-miR-607	HITS-CLIP	23824327
MIRT647611	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT647610	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT647609	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT647608	hsa-miR-1305	HITS-CLIP	23824327
MIRT694587	hsa-miR-625-3p	HITS-CLIP	23313552
MIRT694586	hsa-miR-1295b-3p	HITS-CLIP	23313552
MIRT694585	hsa-miR-455-5p	HITS-CLIP	23313552
MIRT694584	hsa-miR-6872-3p	HITS-CLIP	23313552
MIRT694583	hsa-miR-4487	HITS-CLIP	23313552
MIRT694582	hsa-miR-3199	HITS-CLIP	23313552
MIRT694581	hsa-miR-8052	HITS-CLIP	23313552
MIRT694580	hsa-miR-365a-5p	HITS-CLIP	23313552
MIRT694579	hsa-miR-365b-5p	HITS-CLIP	23313552
MIRT694578	hsa-miR-1227-3p	HITS-CLIP	23313552
MIRT694577	hsa-miR-4715-3p	HITS-CLIP	23313552
MIRT694576	hsa-miR-129-5p	HITS-CLIP	23313552
MIRT647624	hsa-miR-548c-3p	HITS-CLIP	23824327
MIRT647623	hsa-miR-4668-3p	HITS-CLIP	23824327
MIRT647622	hsa-miR-3613-3p	HITS-CLIP	23824327
MIRT647621	hsa-miR-500b-3p	HITS-CLIP	23824327
MIRT647620	hsa-miR-4690-3p	HITS-CLIP	23824327
MIRT647619	hsa-miR-5685	HITS-CLIP	23824327
MIRT647618	hsa-miR-7110-3p	HITS-CLIP	23824327
MIRT647617	hsa-miR-6817-3p	HITS-CLIP	23824327
MIRT647616	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT647615	hsa-miR-627-3p	HITS-CLIP	23824327
MIRT647614	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT647613	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT647612	hsa-miR-607	HITS-CLIP	23824327
MIRT647611	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT647610	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT647609	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT647608	hsa-miR-1305	HITS-CLIP	23824327
MIRT1062819	hsa-miR-1184	CLIP-seq
MIRT1062820	hsa-miR-1207-5p	CLIP-seq
MIRT1062821	hsa-miR-122	CLIP-seq
MIRT1062822	hsa-miR-1273f	CLIP-seq
MIRT1062823	hsa-miR-1285	CLIP-seq
MIRT1062824	hsa-miR-1301	CLIP-seq
MIRT1062825	hsa-miR-1321	CLIP-seq
MIRT1062826	hsa-miR-1827	CLIP-seq
MIRT1062827	hsa-miR-1909	CLIP-seq
MIRT1062828	hsa-miR-1912	CLIP-seq
MIRT1062829	hsa-miR-2110	CLIP-seq
MIRT1062830	hsa-miR-2467-3p	CLIP-seq
MIRT1062831	hsa-miR-28-5p	CLIP-seq
MIRT1062832	hsa-miR-298	CLIP-seq
MIRT1062833	hsa-miR-299-3p	CLIP-seq
MIRT1062834	hsa-miR-3064-3p	CLIP-seq
MIRT1062835	hsa-miR-3135b	CLIP-seq
MIRT1062836	hsa-miR-3139	CLIP-seq
MIRT1062837	hsa-miR-3150b-3p	CLIP-seq
MIRT1062838	hsa-miR-3151	CLIP-seq
MIRT1062839	hsa-miR-3173-3p	CLIP-seq
MIRT1062840	hsa-miR-3180-5p	CLIP-seq
MIRT1062841	hsa-miR-3187-5p	CLIP-seq
MIRT1062842	hsa-miR-326	CLIP-seq
MIRT1062843	hsa-miR-330-5p	CLIP-seq
MIRT1062844	hsa-miR-3612	CLIP-seq
MIRT1062845	hsa-miR-3616-5p	CLIP-seq
MIRT1062846	hsa-miR-3647-5p	CLIP-seq
MIRT1062847	hsa-miR-3652	CLIP-seq
MIRT1062848	hsa-miR-3675-5p	CLIP-seq
MIRT1062849	hsa-miR-3678-3p	CLIP-seq
MIRT1062850	hsa-miR-378g	CLIP-seq
MIRT1062851	hsa-miR-3909	CLIP-seq
MIRT1062852	hsa-miR-3918	CLIP-seq
MIRT1062853	hsa-miR-4259	CLIP-seq
MIRT1062854	hsa-miR-4270	CLIP-seq
MIRT1062855	hsa-miR-4271	CLIP-seq
MIRT1062856	hsa-miR-4283	CLIP-seq
MIRT1062857	hsa-miR-4300	CLIP-seq
MIRT1062858	hsa-miR-4314	CLIP-seq
MIRT1062859	hsa-miR-4419a	CLIP-seq
MIRT1062860	hsa-miR-4425	CLIP-seq
MIRT1062861	hsa-miR-4430	CLIP-seq
MIRT1062862	hsa-miR-4441	CLIP-seq
MIRT1062863	hsa-miR-4443	CLIP-seq
MIRT1062864	hsa-miR-4447	CLIP-seq
MIRT1062865	hsa-miR-4472	CLIP-seq
MIRT1062866	hsa-miR-4486	CLIP-seq
MIRT1062867	hsa-miR-4489	CLIP-seq
MIRT1062868	hsa-miR-450b-5p	CLIP-seq
MIRT1062869	hsa-miR-4510	CLIP-seq
MIRT1062870	hsa-miR-4512	CLIP-seq
MIRT1062871	hsa-miR-4519	CLIP-seq
MIRT1062872	hsa-miR-4660	CLIP-seq
MIRT1062873	hsa-miR-4667-5p	CLIP-seq
MIRT1062874	hsa-miR-4685-5p	CLIP-seq
MIRT1062875	hsa-miR-4688	CLIP-seq
MIRT1062876	hsa-miR-4700-5p	CLIP-seq
MIRT1062877	hsa-miR-4717-5p	CLIP-seq
MIRT1062878	hsa-miR-4725-3p	CLIP-seq
MIRT1062879	hsa-miR-4728-5p	CLIP-seq
MIRT1062880	hsa-miR-4731-5p	CLIP-seq
MIRT1062881	hsa-miR-4739	CLIP-seq
MIRT1062882	hsa-miR-4747-5p	CLIP-seq
MIRT1062883	hsa-miR-4756-3p	CLIP-seq
MIRT1062884	hsa-miR-4756-5p	CLIP-seq
MIRT1062885	hsa-miR-4757-5p	CLIP-seq
MIRT1062886	hsa-miR-4763-3p	CLIP-seq
MIRT1062887	hsa-miR-4776-3p	CLIP-seq
MIRT1062888	hsa-miR-4784	CLIP-seq
MIRT1062889	hsa-miR-4795-5p	CLIP-seq
MIRT1062890	hsa-miR-4802-5p	CLIP-seq
MIRT1062891	hsa-miR-486-3p	CLIP-seq
MIRT1062892	hsa-miR-491-5p	CLIP-seq
MIRT1062893	hsa-miR-5047	CLIP-seq
MIRT1062894	hsa-miR-507	CLIP-seq
MIRT1062895	hsa-miR-557	CLIP-seq
MIRT1062896	hsa-miR-571	CLIP-seq
MIRT1062897	hsa-miR-573	CLIP-seq
MIRT1062898	hsa-miR-593	CLIP-seq
MIRT1062899	hsa-miR-612	CLIP-seq
MIRT1062900	hsa-miR-629	CLIP-seq
MIRT1062901	hsa-miR-650	CLIP-seq
MIRT1062902	hsa-miR-665	CLIP-seq
MIRT1062903	hsa-miR-708	CLIP-seq
MIRT1062904	hsa-miR-765	CLIP-seq
MIRT1062905	hsa-miR-920	CLIP-seq
MIRT1062906	hsa-miR-940	CLIP-seq
MIRT1062820	hsa-miR-1207-5p	CLIP-seq
MIRT1062821	hsa-miR-122	CLIP-seq
MIRT1062823	hsa-miR-1285	CLIP-seq
MIRT1062827	hsa-miR-1909	CLIP-seq
MIRT1062830	hsa-miR-2467-3p	CLIP-seq
MIRT2014813	hsa-miR-3126-5p	CLIP-seq
MIRT1062835	hsa-miR-3135b	CLIP-seq
MIRT1062841	hsa-miR-3187-5p	CLIP-seq
MIRT2014814	hsa-miR-3194-5p	CLIP-seq
MIRT1062842	hsa-miR-326	CLIP-seq
MIRT1062843	hsa-miR-330-5p	CLIP-seq
MIRT1062845	hsa-miR-3616-5p	CLIP-seq
MIRT1062846	hsa-miR-3647-5p	CLIP-seq
MIRT1062847	hsa-miR-3652	CLIP-seq
MIRT1062849	hsa-miR-3678-3p	CLIP-seq
MIRT1062850	hsa-miR-378g	CLIP-seq
MIRT1062852	hsa-miR-3918	CLIP-seq
MIRT1062855	hsa-miR-4271	CLIP-seq
MIRT2014815	hsa-miR-4286	CLIP-seq
MIRT1062859	hsa-miR-4419a	CLIP-seq
MIRT1062861	hsa-miR-4430	CLIP-seq
MIRT1062866	hsa-miR-4486	CLIP-seq
MIRT1062869	hsa-miR-4510	CLIP-seq
MIRT1062870	hsa-miR-4512	CLIP-seq
MIRT1062873	hsa-miR-4667-5p	CLIP-seq
MIRT1062874	hsa-miR-4685-5p	CLIP-seq
MIRT1062876	hsa-miR-4700-5p	CLIP-seq
MIRT2014816	hsa-miR-4707-3p	CLIP-seq
MIRT2014817	hsa-miR-4716-3p	CLIP-seq
MIRT1062878	hsa-miR-4725-3p	CLIP-seq
MIRT1062880	hsa-miR-4731-5p	CLIP-seq
MIRT1062882	hsa-miR-4747-5p	CLIP-seq
MIRT1062885	hsa-miR-4757-5p	CLIP-seq
MIRT1062886	hsa-miR-4763-3p	CLIP-seq
MIRT2014818	hsa-miR-4763-5p	CLIP-seq
MIRT1062889	hsa-miR-4795-5p	CLIP-seq
MIRT1062891	hsa-miR-486-3p	CLIP-seq
MIRT1062897	hsa-miR-573	CLIP-seq
MIRT1062898	hsa-miR-593	CLIP-seq
MIRT1062899	hsa-miR-612	CLIP-seq
MIRT2247147	hsa-miR-1205	CLIP-seq
MIRT1062820	hsa-miR-1207-5p	CLIP-seq
MIRT1062823	hsa-miR-1285	CLIP-seq
MIRT2247148	hsa-miR-1307	CLIP-seq
MIRT1062827	hsa-miR-1909	CLIP-seq
MIRT1062831	hsa-miR-28-5p	CLIP-seq
MIRT1062836	hsa-miR-3139	CLIP-seq
MIRT1062837	hsa-miR-3150b-3p	CLIP-seq
MIRT2247149	hsa-miR-3158-5p	CLIP-seq
MIRT1062841	hsa-miR-3187-5p	CLIP-seq
MIRT1062842	hsa-miR-326	CLIP-seq
MIRT1062843	hsa-miR-330-5p	CLIP-seq
MIRT2247150	hsa-miR-3665	CLIP-seq
MIRT1062850	hsa-miR-378g	CLIP-seq
MIRT2247151	hsa-miR-3929	CLIP-seq
MIRT2247152	hsa-miR-4284	CLIP-seq
MIRT2247153	hsa-miR-4287	CLIP-seq
MIRT2247154	hsa-miR-4419b	CLIP-seq
MIRT2247155	hsa-miR-4478	CLIP-seq
MIRT1062866	hsa-miR-4486	CLIP-seq
MIRT1062871	hsa-miR-4519	CLIP-seq
MIRT2247156	hsa-miR-4530	CLIP-seq
MIRT2247157	hsa-miR-4638-5p	CLIP-seq
MIRT2247158	hsa-miR-4685-3p	CLIP-seq
MIRT2247159	hsa-miR-4696	CLIP-seq
MIRT2014817	hsa-miR-4716-3p	CLIP-seq
MIRT2247160	hsa-miR-4722-5p	CLIP-seq
MIRT1062880	hsa-miR-4731-5p	CLIP-seq
MIRT1062886	hsa-miR-4763-3p	CLIP-seq
MIRT1062888	hsa-miR-4784	CLIP-seq
MIRT1062891	hsa-miR-486-3p	CLIP-seq
MIRT1062898	hsa-miR-593	CLIP-seq
MIRT1062899	hsa-miR-612	CLIP-seq
MIRT2247161	hsa-miR-645	CLIP-seq
MIRT1062903	hsa-miR-708	CLIP-seq
MIRT1062906	hsa-miR-940	CLIP-seq
MIRT2247151	hsa-miR-3929	CLIP-seq
MIRT2247154	hsa-miR-4419b	CLIP-seq
MIRT2389314	hsa-miR-4435	CLIP-seq
MIRT2389315	hsa-miR-4450	CLIP-seq
MIRT2247155	hsa-miR-4478	CLIP-seq
MIRT2389316	hsa-miR-4505	CLIP-seq
MIRT1062873	hsa-miR-4667-5p	CLIP-seq
MIRT2389317	hsa-miR-4675	CLIP-seq
MIRT1062876	hsa-miR-4700-5p	CLIP-seq
MIRT1062880	hsa-miR-4731-5p	CLIP-seq
MIRT2389318	hsa-miR-4741	CLIP-seq
MIRT2389319	hsa-miR-4755-3p	CLIP-seq
MIRT1062892	hsa-miR-491-5p	CLIP-seq
MIRT2247161	hsa-miR-645	CLIP-seq
MIRT2429979	hsa-miR-1247	CLIP-seq
MIRT2014816	hsa-miR-4707-3p	CLIP-seq
MIRT2014818	hsa-miR-4763-5p	CLIP-seq
MIRT2451659	hsa-miR-214	CLIP-seq
MIRT2451660	hsa-miR-2467-5p	CLIP-seq
MIRT2451661	hsa-miR-3619-5p	CLIP-seq
MIRT2451662	hsa-miR-4514	CLIP-seq
MIRT2247156	hsa-miR-4530	CLIP-seq
MIRT2451663	hsa-miR-4655-5p	CLIP-seq
MIRT2451664	hsa-miR-4690-5p	CLIP-seq
MIRT2451665	hsa-miR-4692	CLIP-seq
MIRT2451666	hsa-miR-761	CLIP-seq
MIRT1062906	hsa-miR-940	CLIP-seq
MIRT2550627	hsa-miR-1227	CLIP-seq
MIRT2451659	hsa-miR-214	CLIP-seq
MIRT2451660	hsa-miR-2467-5p	CLIP-seq
MIRT2451661	hsa-miR-3619-5p	CLIP-seq
MIRT2451662	hsa-miR-4514	CLIP-seq
MIRT2247156	hsa-miR-4530	CLIP-seq
MIRT2451663	hsa-miR-4655-5p	CLIP-seq
MIRT2451664	hsa-miR-4690-5p	CLIP-seq
MIRT2451665	hsa-miR-4692	CLIP-seq
MIRT2451666	hsa-miR-761	CLIP-seq
MIRT1062906	hsa-miR-940	CLIP-seq
MIRT2451659	hsa-miR-214	CLIP-seq
MIRT2451660	hsa-miR-2467-5p	CLIP-seq
MIRT2451661	hsa-miR-3619-5p	CLIP-seq
MIRT2451662	hsa-miR-4514	CLIP-seq
MIRT2247156	hsa-miR-4530	CLIP-seq
MIRT2451663	hsa-miR-4655-5p	CLIP-seq
MIRT2451664	hsa-miR-4690-5p	CLIP-seq
MIRT2451665	hsa-miR-4692	CLIP-seq
MIRT2451666	hsa-miR-761	CLIP-seq
MIRT1062906	hsa-miR-940	CLIP-seq

Show/Hide all(8)

GO ID	Ontology	Definition	Evidence	Reference
GO:0007155	Process	Cell adhesion	IEA
GO:0007399	Process	Nervous system development	IEA
GO:0014069	Component	Postsynaptic density	IEA
GO:0016021	Component	Integral component of membrane	IEA
GO:0043005	Component	Neuron projection	IBA	21873635
GO:0045211	Component	Postsynaptic membrane	IEA
GO:0098982	Component	GABA-ergic synapse	IEA
GO:0099629	Component	Postsynaptic specialization of symmetric synapse	IEA

MIM	HGNC	e!Ensembl
613773	32326	ENSG00000080854

Protein

UniProt ID

Q9UPX0

Protein name

Protein turtle homolog B (Immunoglobulin superfamily member 9B) (IgSF9B)

Protein function

Transmembrane protein which is abundantly expressed in interneurons, where it may regulate inhibitory synapse development. May mediate homophilic cell adhesion.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF13927	Ig_3	26 → 116		Domain
PF13927	Ig_3	138 → 212		Domain
PF13927	Ig_3	228 → 307		Domain
PF13895	Ig_2	325 → 416	Immunoglobulin domain	Domain
PF13927	Ig_3	419 → 492		Domain

Sequence

MIWYVATFIASVIGTRGLAAEGAHGLREEPEFVTARAGESVVLRCDVIHPVTGQPPPYVV
EWFKFGVPIPIFIKFGYYPPHVDPEYAGRASLHDKASLRLEQVRSEDQGWYECKVLMLDQ
QYDTFHNGSWVHLTINAPPTFTETPPQYIEAKEGGSITMTCTAFGNPKPIVTWLKEGTLL
GASGKYQVSDGSLTVTSVSREDRGAYTCRAYSIQGEAVHTTHLLVQGPPFIVSPPENITV
NISQDALLTCRAEAYPGNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIFRVKPEDSGK
YTCVPSNSLGRSPSASAYLTVQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATVVKWN
KDGRPLQVEKNLGWTLMEDGSIRIEEATEEALGTYTCVPYNTLGTMGQSAPARLVLKDPP
YFTVLPGWEYRQEAGRELLIPCAAAGDPFPVITWRKVGKPSRSKHSALPSGSLQFRALSK
EDHGEWECVATNVVTSITASTHLTVIGTSPHAPGSVRVQVSMTTANVSWEPGYDGGYEQT
FSVWMKRAQFGPHDWLSLPVPPGPSWLLVDTLEPETAYQFSVLAQNKLGTSAFSEVVTVN
TLAFPITTPEPLVLVTPPRCLIANRTQQGVLLSWLPPANHSFPIDRYIMEFRVAERWELL
DDGIPGTEGEFFAKDLSQDTWYEFRVLAVMQDLISEPSNIAGVSSTDIFPQPDLTEDGLA
RPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPLSITHCRKSLESPLSSG
KVSPESIRTLRAPSESSDDQGQPAAKRMLSPTREKELSLYKKTKRAISSKKYSVAKAEAE
AEATTPIELISRGPDGRFVMDPAEMEPSLKSRRIEGFPFAEETDMYPEFRQSDEENEDPL
VPTSVAALKSQLTPLSSSQESYLPPPAYSPRFQPRGLEGPGGLEGRLQATGQARPPAPRP
FHHGQYYGYLSSSSPGEVEPPPFYVPEVGSPLSSVMSSPPLPTEGPFGHPTIPEENGENA
SNSTLPLTQTPTGGRSPEPWGRPEFPFGGLETPAMMFPHQLPPCDVPESLQPKAGLPRGL
PPTSLQVPAAYPGILSLEAPKGWAGKSPGRGPVPAPPAAKWQDRPMQPLVSQGQLRHTSQ
GMGIPVLPYPEPAEPGAHGGPSTFGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSR
LSPLTQSPLSSRTGSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQ
SSRSGSPSYRPAMGFTTLATGYPSPPPGPAPAGPGDSLDVFGQTPSPRRTGEELLRPETP
PPTLPTSGKLQRDRPAPATSPPERALSKL

Sequence length

1349

Interactions

View interactions

Show/Hide Causal Diseases (1)

Disease term	Disease name	dbSNP ID	References
Causal
Schizophrenia	Schizophrenia	rs13447324, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346 View all (12 more)	26198764, 25056061, 28991256, 31268507, 30285260

Show/Hide Unknown Diseases (5)

Disease term	Disease name	References	Source
Unknown
Mental depression	Major Depressive Disorder	29071344	ClinVar
Parkinson Disease	Parkinson Disease		GWAS
Neuroticism	Neuroticism		GWAS
Bipolar Disorder	Bipolar Disorder		GWAS
Insomnia	Insomnia		GWAS

Show/Hide Text Mining Associations (1)

Disease Name	Relationship Type	References
Associations from Text Mining
Multiple Sclerosis	Associate	30217166

IGSF9B (immunoglobulin superfamily member 9B)