Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
22954
Gene name Gene Name - the full gene name approved by the HGNC.
Tripartite motif containing 32
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TRIM32
Synonyms (NCBI Gene) Gene synonyms aliases
BBS11, HT2A, LGMD2H, LGMDR8, TATIP
Disease Acronyms (UniProt) Disease acronyms from UniProt database
BBS11, LGMDR8
Chromosome Chromosome number
9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q33.1
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The protein localizes to cytoplasmic bodies. The p
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT001492 hsa-miR-155-5p pSILAC 18668040
MIRT001492 hsa-miR-155-5p Proteomics;Other 18668040
MIRT031385 hsa-miR-16-5p Proteomics 18668040
MIRT001492 hsa-miR-155-5p Microarray, qRT-PCR 25128227
MIRT001492 hsa-miR-155-5p Microarray, qRT-PCR 25128227
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000209 Process Protein polyubiquitination IDA 18632609
GO:0001894 Process Tissue homeostasis IEA
GO:0003713 Function Transcription coactivator activity IDA 23077300
GO:0003723 Function RNA binding ISS
GO:0004842 Function Ubiquitin-protein transferase activity IDA 19349376
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602290 16380 ENSG00000119401
Protein
UniProt ID Q13049
Protein name E3 ubiquitin-protein ligase TRIM32 (EC 2.3.2.27) (72 kDa Tat-interacting protein) (RING-type E3 ubiquitin transferase TRIM32) (Tripartite motif-containing protein 32) (Zinc finger protein HT2A)
Protein function E3 ubiquitin ligase that plays a role in various biological processes including neural stem cell differentiation, innate immunity, inflammatory resonse and autophagy (PubMed:19349376, PubMed:31123703). Plays a role in virus-triggered induction o
PDB 2CT2 , 5FEY
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13445 zf-RING_UBOX 20 62 RING-type zinc-finger Domain
PF01436 NHL 371 398 NHL repeat Repeat
PF01436 NHL 469 496 NHL repeat Repeat
PF01436 NHL 616 643 NHL repeat Repeat
Tissue specificity TISSUE SPECIFICITY: Spleen, thymus, prostate, testis, ovary, intestine, colon and skeletal muscle. {ECO:0000269|PubMed:11822024}.
Sequence
MAAAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVR
CP
FCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQFCRSCGLVLC
EPCREADHQPPGHCTLPVKEAAEERRRDFGEKLTRLRELMGELQRRKAALEGVSKDLQAR
YKAVLQEYGHEERRVQDELARSRKFFTGSLAEVEKSNSQVVEEQSYLLNIAEVQAVSRCD
YFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHVGPLQIGQAVKKPRT
VNVEDSWAMEATASAASTSVTFREMDMSPEEVVASPRASPAKQRGPEAASNIQQCLFLKK
MGAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKGFLKEIRRSPSGIDSFVLS
FLGADLPNLTPLSVAMNCQGLIGVTDSYDNSLKVYTLDGHCVACHRSQLSKPWGITALPS
GQFVVTDVEGGKLWCF
TVDRGSGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNLENR
QNEHHLEGGFSIGSVGPDGQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKEIL
HFPKGGGYSVLIREGLTCPVGIALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP
Sequence length 653
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Ubiquitin mediated proteolysis   Regulation of innate immune responses to cytosolic DNA
Antigen processing: Ubiquitination & Proteasome degradation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Bardet-biedl syndrome Bardet-Biedl Syndrome, BARDET-BIEDL SYNDROME 11, Bardet-Biedl syndrome 1 (disorder), Bardet-Biedl syndrome rs397704728, rs397515335, rs397515337, rs267607031, rs121918327, rs587777801, rs587777802, rs121918328, rs587777803, rs549625604, rs137852837, rs137852833, rs137852835, rs267606719, rs199874059
View all (560 more)
21775502, 15786463, 11822024, 23142638, 16606853, 17994549
Cryptorchidism Cryptorchidism rs121912555, rs104894697, rs104894698, rs398122886
Hypertension Hypertensive disease rs13306026
Limb-girdle muscular dystrophy Muscular Dystrophies, Limb-Girdle rs2137534216, rs104894422, rs762777463, rs104894423, rs137854524, rs137854521, rs137854523, rs137854529, rs398123555, rs119463996, rs587777814, rs119463992, rs267606971, rs267606967, rs28941782
View all (762 more)
Unknown
Disease term Disease name Evidence References Source
Bardet-Biedl Syndrome Bardet-Biedl syndrome 11 GenCC
Associations from Text Mining
Disease Name Relationship Type References
Amyotrophic Lateral Sclerosis Associate 23469062
Arthritis Rheumatoid Associate 32145086
Atrophy Associate 31234693
Attention Deficit Disorder with Hyperactivity Associate 24381304
Autism Spectrum Disorder Associate 24381304
Bardet Biedl Syndrome Associate 20177705, 23404957, 25351777, 30823891
Carcinogenesis Associate 21628460
Carcinoma Renal Cell Associate 33173411
Cognition Disorders Associate 25351777
Developmental Disabilities Associate 24381304