Gene Gene information from NCBI Gene database.
Entrez ID 2220
Gene name Ficolin 2
Gene symbol FCN2
Synonyms (NCBI Gene)
EBP-37FCNLP35ficolin-2
Chromosome 9
Chromosome location 9q34.3
Summary The product of this gene belongs to the ficolin family of proteins. This family is characterized by the presence of a leader peptide, a short N-terminal segment, followed by a collagen-like region, and a C-terminal fibrinogen-like domain. This gene is pre
miRNA miRNA information provided by mirtarbase database.
269
miRTarBase ID miRNA Experiments Reference
MIRT029624 hsa-miR-26b-5p Microarray 19088304
MIRT610902 hsa-miR-8485 HITS-CLIP 23824327
MIRT610901 hsa-miR-501-3p HITS-CLIP 23824327
MIRT610900 hsa-miR-502-3p HITS-CLIP 23824327
MIRT614115 hsa-miR-764 HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
44
GO ID Ontology Definition Evidence Reference
GO:0001867 Process Complement activation, lectin pathway IBA
GO:0001867 Process Complement activation, lectin pathway IDA 18204047, 22691502, 23386610
GO:0001867 Process Complement activation, lectin pathway IDA 10679061, 14707097, 15804047
GO:0001867 Process Complement activation, lectin pathway IEA
GO:0001905 Process Activation of membrane attack complex IDA 18204047
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601624 3624 ENSG00000160339
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q15485
Protein name Ficolin-2 (37 kDa elastin-binding protein) (Collagen/fibrinogen domain-containing protein 2) (EBP-37) (Ficolin-B) (Ficolin-beta) (Hucolin) (L-ficolin) (Serum lectin p35)
Protein function May function in innate immunity through activation of the lectin complement pathway. Calcium-dependent and GlcNAc-binding lectin. Enhances phagocytosis of S.typhimurium by neutrophils, suggesting an opsonic effect via the collagen region. {ECO:0
PDB 2J0G , 2J0H , 2J0Y , 2J1G , 2J2P , 2J3F , 2J3G , 2J3O , 2J3U , 2J61 , 4NYT , 4R9J , 4R9T
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01391 Collagen 39 98 Collagen triple helix repeat (20 copies) Repeat
PF00147 Fibrinogen_C 101 313 Fibrinogen beta and gamma chains, C-terminal globular domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed by the liver and secreted in plasma.
Sequence
Sequence length 313
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Lectin pathway of complement activation
Initial triggering of complement
Ficolins bind to repetitive carbohydrate structures on the target cell surface
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
4
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Clear cell carcinoma of kidney Benign rs147936623 RCV005927623
FCN2-related disorder Benign; Likely benign rs17549193, rs147940112, rs7851696 RCV003977273
RCV003934701
RCV003981931
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 39390580
Atherosclerosis Associate 32641418
Bronchiectasis Associate 25251245
Carcinoma Hepatocellular Associate 22140517
Carcinoma Hepatocellular Inhibit 26220728
Carcinoma Squamous Cell Inhibit 39390580
Cerebral Infarction Associate 32641418
Common Variable Immunodeficiency Associate 25251245
Communicable Diseases Associate 22140517, 27576476, 34777352
digital ulcers Associate 30885245