Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
2220
Gene name Gene Name - the full gene name approved by the HGNC.
Ficolin 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
FCN2
Synonyms (NCBI Gene) Gene synonyms aliases
EBP-37, FCNL, P35, ficolin-2
Chromosome Chromosome number
9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q34.3
Summary Summary of gene provided in NCBI Entrez Gene.
The product of this gene belongs to the ficolin family of proteins. This family is characterized by the presence of a leader peptide, a short N-terminal segment, followed by a collagen-like region, and a C-terminal fibrinogen-like domain. This gene is pre
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT029624 hsa-miR-26b-5p Microarray 19088304
MIRT610902 hsa-miR-8485 HITS-CLIP 23824327
MIRT610901 hsa-miR-501-3p HITS-CLIP 23824327
MIRT610900 hsa-miR-502-3p HITS-CLIP 23824327
MIRT614115 hsa-miR-764 HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001867 Process Complement activation, lectin pathway IBA 21873635
GO:0001867 Process Complement activation, lectin pathway IDA 14707097, 15804047
GO:0001867 Process Complement activation, lectin pathway TAS
GO:0003823 Function Antigen binding IBA 21873635
GO:0003823 Function Antigen binding IDA 8576206
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
601624 3624 ENSG00000160339
Protein
UniProt ID Q15485
Protein name Ficolin-2 (37 kDa elastin-binding protein) (Collagen/fibrinogen domain-containing protein 2) (EBP-37) (Ficolin-B) (Ficolin-beta) (Hucolin) (L-ficolin) (Serum lectin p35)
Protein function May function in innate immunity through activation of the lectin complement pathway. Calcium-dependent and GlcNAc-binding lectin. Enhances phagocytosis of S.typhimurium by neutrophils, suggesting an opsonic effect via the collagen region. {ECO:0
PDB 2J0G , 2J0H , 2J0Y , 2J1G , 2J2P , 2J3F , 2J3G , 2J3O , 2J3U , 2J61 , 4NYT , 4R9J , 4R9T
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01391 Collagen 39 98 Collagen triple helix repeat (20 copies) Repeat
PF00147 Fibrinogen_C 101 313 Fibrinogen beta and gamma chains, C-terminal globular domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed by the liver and secreted in plasma.
Sequence
Sequence length 313
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Lectin pathway of complement activation
Initial triggering of complement
Ficolins bind to repetitive carbohydrate structures on the target cell surface
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Colorectal cancer Colorectal Carcinoma rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
Unknown
Disease term Disease name Evidence References Source
Oligodendroglioma Oligodendroglioma GWAS
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 39390580
Atherosclerosis Associate 32641418
Bronchiectasis Associate 25251245
Carcinoma Hepatocellular Associate 22140517
Carcinoma Hepatocellular Inhibit 26220728
Carcinoma Squamous Cell Inhibit 39390580
Cerebral Infarction Associate 32641418
Common Variable Immunodeficiency Associate 25251245
Communicable Diseases Associate 22140517, 27576476, 34777352
digital ulcers Associate 30885245