NT5DC1 (5'-nucleotidase domain containing 1)

Gene

• Entrez ID: 221294
• Gene name: 5'-nucleotidase domain containing 1
• Gene symbol: NT5DC1
• Synonyms (NCBI Gene): C6orf200, LP2642, NT5C2L1
• Chromosome: 6
• Chromosome location: 6q22.1
• Summary: While the exact function of the protein encoded by this gene is not known, it belongs to the 5`(3`)-deoxyribonucleotidase family. [provided by RefSeq, May 2010]

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT003876	hsa-miR-15a-5p	Microarray	18362358
MIRT004370	hsa-miR-16-5p	Microarray	18362358
MIRT047616	hsa-miR-10a-5p	CLASH	23622248
MIRT710876	hsa-miR-483-3p	HITS-CLIP	19536157
MIRT710875	hsa-miR-6734-3p	HITS-CLIP	19536157
MIRT710874	hsa-miR-3667-3p	HITS-CLIP	19536157
MIRT710872	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT710876	hsa-miR-483-3p	HITS-CLIP	19536157
MIRT710875	hsa-miR-6734-3p	HITS-CLIP	19536157
MIRT710874	hsa-miR-3667-3p	HITS-CLIP	19536157
MIRT710873	hsa-miR-2355-5p	HITS-CLIP	19536157
MIRT710872	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT663892	hsa-miR-595	HITS-CLIP	21572407
MIRT517727	hsa-miR-6867-5p	HITS-CLIP	21572407
MIRT517726	hsa-miR-574-5p	HITS-CLIP	21572407
MIRT663895	hsa-miR-548n	HITS-CLIP	23824327
MIRT663894	hsa-miR-548az-5p	HITS-CLIP	23824327
MIRT663893	hsa-miR-548t-5p	HITS-CLIP	23824327
MIRT517730	hsa-miR-548at-5p	HITS-CLIP	23824327
MIRT517729	hsa-miR-561-3p	HITS-CLIP	23824327
MIRT663892	hsa-miR-595	HITS-CLIP	23824327
MIRT517728	hsa-miR-223-5p	HITS-CLIP	23824327
MIRT517727	hsa-miR-6867-5p	HITS-CLIP	23824327
MIRT517726	hsa-miR-574-5p	HITS-CLIP	23824327
MIRT517730	hsa-miR-548at-5p	PAR-CLIP	23446348
MIRT517729	hsa-miR-561-3p	PAR-CLIP	23446348
MIRT517728	hsa-miR-223-5p	PAR-CLIP	23446348
MIRT517727	hsa-miR-6867-5p	PAR-CLIP	23446348
MIRT517726	hsa-miR-574-5p	PAR-CLIP	23446348
MIRT517728	hsa-miR-223-5p	HITS-CLIP	27418678
MIRT517728	hsa-miR-223-5p	HITS-CLIP	27418678
MIRT517728	hsa-miR-223-5p	HITS-CLIP	27418678
MIRT517728	hsa-miR-223-5p	HITS-CLIP	27418678
MIRT517730	hsa-miR-548at-5p	HITS-CLIP	27418678
MIRT517730	hsa-miR-548at-5p	HITS-CLIP	27418678
MIRT517730	hsa-miR-548at-5p	HITS-CLIP	27418678
MIRT517730	hsa-miR-548at-5p	HITS-CLIP	27418678
MIRT663894	hsa-miR-548az-5p	HITS-CLIP	27418678
MIRT663894	hsa-miR-548az-5p	HITS-CLIP	27418678
MIRT663894	hsa-miR-548az-5p	HITS-CLIP	27418678
MIRT663895	hsa-miR-548n	HITS-CLIP	27418678
MIRT663895	hsa-miR-548n	HITS-CLIP	27418678
MIRT663895	hsa-miR-548n	HITS-CLIP	27418678
MIRT663893	hsa-miR-548t-5p	HITS-CLIP	27418678
MIRT663893	hsa-miR-548t-5p	HITS-CLIP	27418678
MIRT663893	hsa-miR-548t-5p	HITS-CLIP	27418678
MIRT517729	hsa-miR-561-3p	HITS-CLIP	27418678
MIRT517729	hsa-miR-561-3p	HITS-CLIP	27418678
MIRT517729	hsa-miR-561-3p	HITS-CLIP	27418678
MIRT517729	hsa-miR-561-3p	HITS-CLIP	27418678
MIRT517726	hsa-miR-574-5p	HITS-CLIP	27418678
MIRT517726	hsa-miR-574-5p	HITS-CLIP	27418678
MIRT517726	hsa-miR-574-5p	HITS-CLIP	27418678
MIRT517726	hsa-miR-574-5p	HITS-CLIP	27418678
MIRT663892	hsa-miR-595	HITS-CLIP	27418678
MIRT663892	hsa-miR-595	HITS-CLIP	27418678
MIRT663892	hsa-miR-595	HITS-CLIP	27418678
MIRT517727	hsa-miR-6867-5p	HITS-CLIP	27418678
MIRT517727	hsa-miR-6867-5p	HITS-CLIP	27418678
MIRT517727	hsa-miR-6867-5p	HITS-CLIP	27418678
MIRT517727	hsa-miR-6867-5p	HITS-CLIP	27418678
MIRT710876	hsa-miR-483-3p	HITS-CLIP	19536157
MIRT710875	hsa-miR-6734-3p	HITS-CLIP	19536157
MIRT710874	hsa-miR-3667-3p	HITS-CLIP	19536157
MIRT710872	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT710876	hsa-miR-483-3p	HITS-CLIP	19536157
MIRT710875	hsa-miR-6734-3p	HITS-CLIP	19536157
MIRT710874	hsa-miR-3667-3p	HITS-CLIP	19536157
MIRT710873	hsa-miR-2355-5p	HITS-CLIP	19536157
MIRT710872	hsa-miR-335-3p	HITS-CLIP	19536157
MIRT663892	hsa-miR-595	HITS-CLIP	21572407
MIRT517727	hsa-miR-6867-5p	HITS-CLIP	21572407
MIRT517726	hsa-miR-574-5p	HITS-CLIP	21572407
MIRT663895	hsa-miR-548n	HITS-CLIP	23824327
MIRT663894	hsa-miR-548az-5p	HITS-CLIP	23824327
MIRT663893	hsa-miR-548t-5p	HITS-CLIP	23824327
MIRT517730	hsa-miR-548at-5p	HITS-CLIP	23824327
MIRT517729	hsa-miR-561-3p	HITS-CLIP	23824327
MIRT663892	hsa-miR-595	HITS-CLIP	23824327
MIRT517728	hsa-miR-223-5p	HITS-CLIP	23824327
MIRT517727	hsa-miR-6867-5p	HITS-CLIP	23824327
MIRT517726	hsa-miR-574-5p	HITS-CLIP	23824327
MIRT517730	hsa-miR-548at-5p	PAR-CLIP	23446348
MIRT517729	hsa-miR-561-3p	PAR-CLIP	23446348
MIRT517728	hsa-miR-223-5p	PAR-CLIP	23446348
MIRT517727	hsa-miR-6867-5p	PAR-CLIP	23446348
MIRT517726	hsa-miR-574-5p	PAR-CLIP	23446348
MIRT1195750	hsa-miR-101	CLIP-seq
MIRT1195751	hsa-miR-1185	CLIP-seq
MIRT1195752	hsa-miR-125a-3p	CLIP-seq
MIRT740173	hsa-miR-1264	CLIP-seq
MIRT1195753	hsa-miR-129-5p	CLIP-seq
MIRT1195754	hsa-miR-1323	CLIP-seq
MIRT1195755	hsa-miR-144	CLIP-seq
MIRT1195756	hsa-miR-146a	CLIP-seq
MIRT1195757	hsa-miR-146b-5p	CLIP-seq
MIRT1195758	hsa-miR-190	CLIP-seq
MIRT1195759	hsa-miR-190b	CLIP-seq
MIRT1195760	hsa-miR-3201	CLIP-seq
MIRT1195761	hsa-miR-326	CLIP-seq
MIRT1195762	hsa-miR-330-5p	CLIP-seq
MIRT1195763	hsa-miR-34b	CLIP-seq
MIRT1195764	hsa-miR-3654	CLIP-seq
MIRT1195765	hsa-miR-3679-5p	CLIP-seq
MIRT1195766	hsa-miR-3691-3p	CLIP-seq
MIRT1195767	hsa-miR-378	CLIP-seq
MIRT1195768	hsa-miR-378b	CLIP-seq
MIRT1195769	hsa-miR-378c	CLIP-seq
MIRT1195770	hsa-miR-378d	CLIP-seq
MIRT1195771	hsa-miR-378e	CLIP-seq
MIRT1195772	hsa-miR-378f	CLIP-seq
MIRT1195773	hsa-miR-378h	CLIP-seq
MIRT1195774	hsa-miR-378i	CLIP-seq
MIRT1195775	hsa-miR-3914	CLIP-seq
MIRT1195776	hsa-miR-422a	CLIP-seq
MIRT740174	hsa-miR-4326	CLIP-seq
MIRT1195777	hsa-miR-4452	CLIP-seq
MIRT1195778	hsa-miR-4480	CLIP-seq
MIRT1195779	hsa-miR-4676-5p	CLIP-seq
MIRT1195780	hsa-miR-4719	CLIP-seq
MIRT1195781	hsa-miR-4791	CLIP-seq
MIRT1195782	hsa-miR-516b	CLIP-seq
MIRT1195783	hsa-miR-548o	CLIP-seq
MIRT1195784	hsa-miR-548u	CLIP-seq
MIRT1195785	hsa-miR-575	CLIP-seq
MIRT1195786	hsa-miR-576-5p	CLIP-seq
MIRT1195787	hsa-miR-579	CLIP-seq
MIRT1195788	hsa-miR-580	CLIP-seq
MIRT1195789	hsa-miR-582-5p	CLIP-seq
MIRT1195790	hsa-miR-589	CLIP-seq
MIRT1195791	hsa-miR-593	CLIP-seq
MIRT1195792	hsa-miR-606	CLIP-seq
MIRT1195793	hsa-miR-765	CLIP-seq
MIRT1195794	hsa-miR-873	CLIP-seq
MIRT2056810	hsa-miR-155	CLIP-seq
MIRT2056811	hsa-miR-4720-3p	CLIP-seq
MIRT2056812	hsa-miR-4804-3p	CLIP-seq
MIRT2056813	hsa-miR-561	CLIP-seq
MIRT2285286	hsa-miR-200b	CLIP-seq
MIRT2285287	hsa-miR-200c	CLIP-seq
MIRT2285288	hsa-miR-429	CLIP-seq
MIRT2285289	hsa-miR-4659a-3p	CLIP-seq
MIRT2285290	hsa-miR-4659b-3p	CLIP-seq
MIRT2285291	hsa-miR-513a-3p	CLIP-seq
MIRT1195786	hsa-miR-576-5p	CLIP-seq
MIRT1195792	hsa-miR-606	CLIP-seq
MIRT1195775	hsa-miR-3914	CLIP-seq
MIRT1195779	hsa-miR-4676-5p	CLIP-seq
MIRT1195785	hsa-miR-575	CLIP-seq
MIRT1195794	hsa-miR-873	CLIP-seq
MIRT1195751	hsa-miR-1185	CLIP-seq
MIRT1195758	hsa-miR-190	CLIP-seq
MIRT1195759	hsa-miR-190b	CLIP-seq
MIRT2686639	hsa-miR-2053	CLIP-seq
MIRT1195760	hsa-miR-3201	CLIP-seq
MIRT1195761	hsa-miR-326	CLIP-seq
MIRT1195762	hsa-miR-330-5p	CLIP-seq
MIRT1195765	hsa-miR-3679-5p	CLIP-seq
MIRT1195766	hsa-miR-3691-3p	CLIP-seq
MIRT2686640	hsa-miR-369-3p	CLIP-seq
MIRT2686641	hsa-miR-374a	CLIP-seq
MIRT2686642	hsa-miR-374b	CLIP-seq
MIRT2686643	hsa-miR-4428	CLIP-seq
MIRT1195778	hsa-miR-4480	CLIP-seq
MIRT1195781	hsa-miR-4791	CLIP-seq
MIRT1195782	hsa-miR-516b	CLIP-seq
MIRT1195791	hsa-miR-593	CLIP-seq
MIRT1195793	hsa-miR-765	CLIP-seq
MIRT2686644	hsa-miR-769-5p	CLIP-seq
MIRT2686645	hsa-miR-889	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	28514442, 33961781
GO:0008253	Function	5'-nucleotidase activity	IBA
GO:0016787	Function	Hydrolase activity	IEA
GO:0046872	Function	Metal ion binding	IEA

Other IDs

• MIM: 621076
• HGNC: 21556
• e!Ensembl: ENSG00000178425

Protein

• UniProt ID: Q5TFE4
• Protein name: 5'-nucleotidase domain-containing protein 1 (EC 3.1.3.-)
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF05761	5_nucleotid	1 → 377		Family

• Sequence:

  MAQHFSLAACDVVGFDLDHTLCRYNLPESAPLIYNSFAQFLVKEKGYDKELLNVTPEDWD
  FCCKGLALDLEDGNFLKLANNGTVLRASHGTKMMTPEVLAEAYGKKEWKHFLSDTGMACR
  SGKYYFYDNYFDLPGALLCARVVDYLTKLNNGQKTFDFWKDIVAAIQHNYKMSAFKENCG
  IYFPEIKRDPGRYLHSCPESVKKWLRQLKNAGKILLLITSSHSDYCRLLCEYILGNDFTD
  LFDIVITNALKPGFFSHLPSQRPFRTLENDEEQEALPSLDKPGWYSQGNAVHLYELLKKM
  TGKPEPKVVYFGDSMHSDIFPARHYSNWETVLILEELRGDEGTRSQRPEESEPLEKKGKY
  EGPKAKPLNTSSKKWGSFFIDSVLGLENTEDSLVYTWSCKRISTYSTIAIPSIEAIAELP
  LDYKFTRFSSSNSKTAGYYPNPPLVLSSDETLISK

• Sequence length: 455