Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
2201
Gene name Gene Name - the full gene name approved by the HGNC.
Fibrillin 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
FBN2
Synonyms (NCBI Gene) Gene synonyms aliases
CCA, DA9, EOMD
Chromosome Chromosome number
5
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
5q23.3
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a component of connective tissue microfibrils and may be involved in elastic fiber assembly. Mutations in this gene cause congenital contractural arachnodactyly. [provided by RefSeq, Jul 2008]
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs2307109 G>A,T Conflicting-interpretations-of-pathogenicity, uncertain-significance Coding sequence variant, missense variant
rs28763926 A>G Conflicting-interpretations-of-pathogenicity, likely-benign Coding sequence variant, missense variant
rs28931602 A>C Pathogenic Coding sequence variant, missense variant
rs34845843 G>A,C,T Conflicting-interpretations-of-pathogenicity, uncertain-significance, likely-benign Coding sequence variant, missense variant
rs35346129 G>A Conflicting-interpretations-of-pathogenicity, benign, likely-benign Coding sequence variant, synonymous variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT004012 hsa-miR-101-3p Western blot 19008416
MIRT004012 hsa-miR-101-3p Western blot 19008416
MIRT017958 hsa-miR-335-5p Microarray 18185580
MIRT021389 hsa-miR-9-5p Microarray 17612493
MIRT047815 hsa-miR-30d-5p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001527 Component Microfibril IDA 8120105
GO:0001527 Component Microfibril IEA
GO:0001527 Component Microfibril TAS 20855508
GO:0001890 Process Placenta development IDA 32329225
GO:0005179 Function Hormone activity IBA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
612570 3604 ENSG00000138829
Protein
UniProt ID P35556
Protein name Fibrillin-2 [Cleaved into: Placensin]
Protein function [Fibrillin-2]: Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF18193 Fibrillin_U_N 76 112 Fibrillin 1 unique N-terminal domain Domain
PF00683 TB 224 265 TB domain Family
PF07645 EGF_CA 276 316 Calcium-binding EGF domain Domain
PF07645 EGF_CA 318 358 Calcium-binding EGF domain Domain
PF00683 TB 374 420 TB domain Family
PF12661 hEGF 505 525 Human growth factor-like EGF Domain
PF07645 EGF_CA 535 573 Calcium-binding EGF domain Domain
PF07645 EGF_CA 575 615 Calcium-binding EGF domain Domain
PF12662 cEGF 638 661 Complement Clr-like EGF-like Domain
PF00683 TB 714 759 TB domain Family
PF07645 EGF_CA 768 808 Calcium-binding EGF domain Domain
PF07645 EGF_CA 810 850 Calcium-binding EGF domain Domain
PF00683 TB 906 943 TB domain Family
PF07645 EGF_CA 955 995 Calcium-binding EGF domain Domain
PF00683 TB 1011 1055 TB domain Family
PF07645 EGF_CA 1073 1113 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1115 1156 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1158 1198 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1200 1240 Calcium-binding EGF domain Domain
PF12662 cEGF 1263 1286 Complement Clr-like EGF-like Domain
PF07645 EGF_CA 1325 1365 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1367 1406 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1408 1447 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1449 1489 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1491 1530 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1532 1572 Calcium-binding EGF domain Domain
PF00683 TB 1592 1636 TB domain Family
PF07645 EGF_CA 1650 1690 Calcium-binding EGF domain Domain
PF00683 TB 1748 1794 TB domain Family
PF07645 EGF_CA 1808 1848 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1850 1890 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1892 1932 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1934 1971 Calcium-binding EGF domain Domain
PF07645 EGF_CA 1973 2014 Calcium-binding EGF domain Domain
PF12662 cEGF 1996 2019 Complement Clr-like EGF-like Domain
PF07645 EGF_CA 2056 2096 Calcium-binding EGF domain Domain
PF00683 TB 2112 2158 TB domain Family
PF07645 EGF_CA 2171 2211 Calcium-binding EGF domain Domain
PF07645 EGF_CA 2213 2251 Calcium-binding EGF domain Domain
PF07645 EGF_CA 2253 2292 Calcium-binding EGF domain Domain
PF07645 EGF_CA 2294 2336 Calcium-binding EGF domain Domain
PF07645 EGF_CA 2338 2378 Calcium-binding EGF domain Domain
PF00683 TB 2395 2440 TB domain Family
PF07645 EGF_CA 2449 2489 Calcium-binding EGF domain Domain
PF07645 EGF_CA 2491 2530 Calcium-binding EGF domain Domain
PF07645 EGF_CA 2532 2569 Calcium-binding EGF domain Domain
PF07645 EGF_CA 2571 2612 Calcium-binding EGF domain Domain
PF07645 EGF_CA 2614 2652 Calcium-binding EGF domain Domain
PF07645 EGF_CA 2654 2693 Calcium-binding EGF domain Domain
PF07645 EGF_CA 2695 2733 Calcium-binding EGF domain Domain
Tissue specificity TISSUE SPECIFICITY: Almost exclusively expressed in placenta (PubMed:32329225). Expressed at much lower level in other tissues (PubMed:32329225). Expressed in fetal eye (18 weeks)in the retinal pigment epithelium (RPE), the choroid, Bruch's membrane and i
Sequence
MGRRRRLCLQLYFLWLGCVVLWAQGTAGQPQPPPPKPPRPQPPPQQVRSATAGSEGGFLA
PEYREEGAAVASRVRRRGQQDVLRGPNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCG
DGFCSRPNMCTCSSGQISSTCGSKSIQQCSVRCMNGGTCADDHCQCQKGYIGTYCGQPVC
ENGCQNGGRCIGPNRCACVYGFTGPQCERDYRTGPCFTQVNNQMCQGQLTGIVCTKTLCC
ATIGRAWGHPCEMCPAQPQPCRRGF
IPNIRTGACQDVDECQAIPGICQGGNCINTVGSFE
CRCPAGHKQSETTQKC
EDIDECSIIPGICETGECSNTVGSYFCVCPRGYVTSTDGSRCID
QRTGMCFSGLVNGRCAQELPGRMTKMQCCCEPGRCWGIGTIPEACPVRGSEEYRRLCMDG
LPMGGIPGSAGSRPGGTGGNGFAPSGNGNGYGPGGTGFIPIPGGNGFSPGVGGAGVGAGG
QGPIITGLTILNQTIDICKHHANLCLNGRCIPTVSSYRCECNMGYKQDANGDCIDVDECT
SNPCTNGDCVNTPGSYYCKCHAGFQRTPTKQAC
IDIDECIQNGVLCKNGRCVNTDGSFQC
ICNAGFELTTDGKNC
VDHDECTTTNMCLNGMCINEDGSFKCICKPGFVLAPNGRYCTDVD
E
CQTPGICMNGHCINSEGSFRCDCPPGLAVGMDGRVCVDTHMRSTCYGGIKKGVCVRPFP
GAVTKSECCCANPDYGFGEPCQPCPAKNSAEFHGLCSSG
VGITVDGRDINECALDPDICA
NGICENLRGSYRCNCNSGYEPDASGRNC
IDIDECLVNRLLCDNGLCRNTPGSYSCTCPPG
YVFRTETETC
EDINECESNPCVNGACRNNLGSFNCECSPGSKLSSTGLICIDSLKGTCWL
NIQDSRCEVNINGATLKSECCATLGAAWGSPCERCELDTACPRGLARIKGVTCEDVNECE
VFPGVCPNGRCVNSKGSFHCECPEGLTLDGTGRVC
LDIRMEQCYLKWDEDECIHPVPGKF
RMDACCCAVGAAWGTECEECPKPGTKEYETLCPRG
AGFANRGDVLTGRPFYKDINECKAF
PGMCTYGKCRNTIGSFKCRCNSGFALDMEERNC
TDIDECRISPDLCGSGICVNTPGSFEC
ECFEGYESGFMMMKNC
MDIDECERNPLLCRGGTCVNTEGSFQCDCPLGHELSPSREDCVD
INECSLSDNLCRNGKCVNMIGTYQCSCNPGYQATPDRQGC
TDIDECMIMNGGCDTQCTNS
EGSYECSCSEGYALMPDGRSCADIDECENNPDICDGGQCTNIPGEYRCLCYDGFMASMDM
KTCIDVNECDLNSNICMFGECENTKGSFICHCQLGYSVKKGTTGCTDVDECEIGAHNCDM
HASCLNIPGSFKCSCREGWIGNGIKC
IDLDECSNGTHQCSINAQCVNTPGSYRCACSEGF
TGDGFTC
SDVDECAENINLCENGQCLNVPGAYRCECEMGFTPASDSRSCQDIDECSFQNI
CVFGTCNNLPGMFHCICDDGYELDRTGGNC
TDIDECADPINCVNGLCVNTPGRYECNCPP
DFQLNPTGVGCV
DNRVGNCYLKFGPRGDGSLSCNTEIGVGVSRSSCCCSLGKAWGNPCET
CPPVNSTEYYTLCPGG
EGFRPNPITIILEDIDECQELPGLCQGGNCINTFGSFQCECPQG
YYLSEDTRIC
EDIDECFAHPGVCGPGTCYNTLGNYTCICPPEYMQVNGGHNCMDMRKSFC
YRSYNGTTCENELPFNVTKRMCCCTYNVGKAWNKPCEPCPTPGTADFKTICGNIPGFTFD
IHTGKAVDIDECKEIPGICANGVCINQIGSFRCECPTGFSYNDLLLVCEDIDECSNGDNL
CQRNADCINSPGSYRCECAAGFKLSPNGAC
VDRNECLEIPNVCSHGLCVDLQGSYQCICH
NGFKASQDQTMC
MDVDECERHPCGNGTCKNTVGSYNCLCYPGFELTHNNDCLDIDECSSF
FGQVCRNGRCFNEIG
SFKCLCNEGYELTPDGKNCIDTNECVALPGSCSPGTCQNLEGSFR
CICPPGYEVKSENCIDINECDEDPNICLFGSCTNTPGGFQCLCPPGFVLSDNGRRCFDTR
QSFCFTNFENGKCSVPKAFNTTKAKCCCSKMPGEGWGDPCELCPKDDEVAFQDLCPYGHG
TVPSLHDTREDVNECLESPGICSNGQCINTDGSFRCECPMGYNLDYTGVRCVDTDECSIG
NPCGNGTCTNVIGSFECNCNEGFEPGPMMNC
EDINECAQNPLLCAFRCMNTFGSYECTCP
IGYALREDQKMC
KDLDECAEGLHDCESRGMMCKNLIGTFMCICPPGMARRPDGEGCVDEN
ECRTKPGICENGRCVNIIGSYRCECNEGFQSSSSGTEC
LDNRQGLCFAEVLQTICQMASS
SRNLVTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHG
PGYTTDGRDIDECKVMPNLC
TNGQCINTMGSFRCFCKVGYTTDISGTSC
IDLDECSQSPKPCNYICKNTEGSYQCSCPRG
YVLQEDGKTC
KDLDECQTKQHNCQFLCVNTLGGFTCKCPPGFTQHHTACIDNNECGSQPS
LCGAKGICQNTPGSFSCECQRGFSLDATGLNC
EDVDECDGNHRCQHGCQNILGGYRCGCP
QGYIQHYQWNQC
VDENECSNPNACGSASCYNTLGSYKCACPSGFSFDQFSSACHDVNECS
SSKNPCNYGCSNTEGGYLCGCPPGYYRVGQGHC
VSGMGFNKGQYLSLDTEVDEENALSPE
ACYECKINGYSKKDSRQKRSIHEPDPTAVEQISLESVDMDSPVNMKFNLSHLGSKEHILE
LRPAIQPLNNHIRYVISQGNDDSVFRIHQRNGLSYLHTAKKKLMPGTYTLEITSIPLYKK
KELKKLEESNEDDYLLGELGEALRMRLQIQLY
Sequence length 2912
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Cytoskeleton in muscle cells   Degradation of the extracellular matrix
Elastic fibre formation
Molecules associated with elastic fibres
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Disease merge term Disease name dbSNP ID References
Congenital Contractural Arachnodactyly congenital contractural arachnodactyly rs137852828, rs1554122857, rs1581223990, rs28931602, rs1554123136, rs1581230766, rs267606802, rs138303817, rs1750792792, rs869025428, rs1750812513, rs1085307066, rs1554122896, rs137852825, rs1060503511
View all (14 more)
N/A
Thoracic Aortic Aneurysm And Aortic Dissection familial thoracic aortic aneurysm and aortic dissection rs1554122896, rs1554123064, rs1554122857 N/A
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Anemia Severe aplastic anemia N/A N/A GWAS
Breast Cancer Breast cancer N/A N/A GWAS
Cardiomyopathy Primary dilated cardiomyopathy N/A N/A ClinVar
Connective Tissue Disease Connective tissue disorder N/A N/A ClinVar
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Abortion Spontaneous Associate 34756330
Adenocarcinoma of Lung Associate 34951053
Adenoma Associate 22238052
Alzheimer Disease Associate 33083483
Aortic Aneurysm Thoracic Associate 40436996
Aortic Dissection Associate 31426022, 33083483
Arthrogryposis Associate 34356068
Bicuspid Aortic Valve Disease Stimulate 27634926
Bicuspid Aortic Valve Disease Associate 39226896
Carcinoma Renal Cell Associate 24454902, 34058014, 34689221