Gene Gene information from NCBI Gene database.
Entrez ID 219285
Gene name Sterile alpha motif domain containing 9 like
Gene symbol SAMD9L
Synonyms (NCBI Gene)
ATXPCC7DELqC7orf6DEL7qDRIF2M7MLS1MLSM7SCA49UEF1
Chromosome 7
Chromosome location 7q21.2
Summary This gene encodes a cytoplasmic protein that acts as a tumor suppressor but also plays a key role in cell proliferation and the innate immune response to viral infection. The encoded protein contains an N-terminal sterile alpha motif domain. Naturally occ
SNPs SNP information provided by dbSNP.
4
SNP ID Visualize variation Clinical significance Consequence
rs878855336 G>A,T Pathogenic-likely-pathogenic Coding sequence variant, missense variant, synonymous variant
rs878855337 C>G Pathogenic-likely-pathogenic Coding sequence variant, missense variant
rs1554341158 G>A,T Pathogenic, uncertain-significance Coding sequence variant, missense variant
rs1554341277 A>G Pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
252
miRTarBase ID miRNA Experiments Reference
MIRT021276 hsa-miR-146a-5p Microarray 18057241
MIRT647752 hsa-miR-6731-5p HITS-CLIP 23824327
MIRT647751 hsa-miR-8085 HITS-CLIP 23824327
MIRT647750 hsa-miR-3175 HITS-CLIP 23824327
MIRT647749 hsa-miR-1343-5p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
7
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 24029230
GO:0005737 Component Cytoplasm IBA
GO:0005737 Component Cytoplasm IEA
GO:0005739 Component Mitochondrion IDA 35310830
GO:0005739 Component Mitochondrion IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
611170 1349 ENSG00000177409
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q8IVG5
Protein name Sterile alpha motif domain-containing protein 9-like (SAM domain-containing protein 9-like)
Protein function May be involved in endosome fusion. Mediates down-regulation of growth factor signaling via internalization of growth factor receptors.
Family and domains
Tissue specificity TISSUE SPECIFICITY: Widely expressed in adult and fetal tissues. Expressed in the cerebellum (PubMed:35310830). Variable expression in tumors. Down-regulated in breast cancer. {ECO:0000269|PubMed:17407603, ECO:0000269|PubMed:35310830}.
Sequence
MSKQVSLPEMIKDWTKEHVKKWVNEDLKINEQYGQILLSEEVTGLVLQELTEKDLVEMGL
PWGPALLIKRSYNKLNSKSPESDNHDPGQLDNSKPSKTEHQKNPKHTKKEEENSMSSNID
YDPREIRDIKQEESILMKENVLDEVANAKHKKKGKLKPEQLTCMPYPFDQFHDSHRYIEH
YTLQPETGALNLIDPIHEFKALTNTETATEVDIKMKFSNEVFRFASACMNSRTNGTIHFG
VKDKPHGEIVGVKITSKAAFIDHFNVMIKKYFEESEINEAKKCIREPRFVEVLLQNNTPS
DRFVIEVDTIPKHSICNDKYFYIQMQICKDKIWKQNQNLSLFVREGASSRDILANSKQRD
VDFKAFLQNLKSLVASRKEAEEEYGMKAMKKESEGLKLVKLLIGNRDSLDNSYYDWYILV
TNKCHPNQIKHLDFLKEIKWFAVLEFDPESMINGVVKAYKESRVANLHFPNQYEDKTTNM
WEKISTLNLYQQPSWIFCNGRSDLKSETYKPLEPHLWQRERASEVRKLILFLTDENIMTR
GKFLVVFLLLSSVESPGDPLIETFWAFYQALKGMENMLCISVNSHIYQRWKDLLQTRMKM
EDELTNHSISTLNIELVNSTILKLKSVTRSSRRFLPARGSSSVILEKKKEDVLTALEILC
ENECTETDIEKDKSKFLEFKKSKEEHFYRGGKVSWWNFYFSSENYSSDFVKRDSYEKLKD
LIHCWAESPKPIFAKIINLYHHPGCGGTTLAMHVLWDLKKNFRCAVLKNKTTDFAEIAEQ
VINLVTYRAKSHQDYIPVLLLVDDFEEQENVYFLQNAIHSVLAEKDLRYEKTLVIILNCM
RSRNPDESAKLADSIALNYQLSSKEQRAFGAKLKEIEKQHKNCENFYSFMIMKSNFDETY
IENVVRNILKGQDVDSKEAQLISFLALLSSYVTDSTISVSQCEIFLGIIYTSTPWEPESL
EDKMGTYSTLLIKTEVAEYGRYTGVRIIHPLIALYCLKELERSYHLDKCQIALNILEENL
FYDSGIGRDKFQHDVQTLLLTRQRKVYGDETDTLFSPLMEALQNKDIEKVLSAGSRRFPQ
NAFICQALARHFYIKEKDFNTALDWARQAKMKAPKNSYISDTLGQVYKSEIKWWLDGNKN
CRSITVNDLTHLLEAAEKASRAFKESQRQTDSKNYETENWSPQKSQRRYDMYNTACFLGE
IEVGLYTIQILQLTPFFHKENELSKKHMVQFLSGKWTIPPDPRNECYLALSKFTSHLKNL
QSDLKRCFDFFIDYMVLLKMRYTQKEIAEIMLSKKVSRCFRKYTELFCHLDPCLLQSKES
QLLQEENCRKKLEALRADRFAGLLEYLNPNYKDATTMESIVNEYAFLLQQNSKKPMTNEK
QNSILANIILSCLKPNSKLIQPLTTLKKQLREVLQFVGLSHQYPGPYFLACLLFWPENQE
LDQDSKLIEKYVSSLNRSFRGQYKRMCRSKQASTLFYLGKRKGLNSIVHKAKIEQYFDKA
QNTNSLWHSGDVWKKNEVKDLLRRLTGQAEGKLISVEYGTEEKIKIPVISVYSGPLRSGR
NIERVSFYLGFSIEGPLAYDIEVI
Sequence length 1584
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
272
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Ataxia-pancytopenia syndrome Pathogenic; Likely pathogenic rs878855336, rs1554341158, rs1554341277, rs1792213890 RCV000234838
RCV000515805
RCV000515793
RCV001262984
Intellectual disability Likely pathogenic rs1792226793 RCV001261385
interferonopathy Likely pathogenic rs2116486108 RCV001543402
Monosomy 7 myelodysplasia and leukemia syndrome 1 Likely pathogenic; Pathogenic rs2116467712, rs2116506727, rs878855336, rs1554341158, rs1792140365 RCV001775457
RCV001808162
RCV001270307
RCV001270308
RCV001270310
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Hereditary cancer-predisposing syndrome Uncertain significance rs1304874755 RCV005602619
Microcephaly Uncertain significance; Conflicting classifications of pathogenicity rs1456483063, rs144236612, rs188902048 RCV001252723
RCV001252921
RCV001252929
Primary ciliary dyskinesia 12 Conflicting classifications of pathogenicity rs199714577 RCV005863422
See cases Benign; Likely benign rs140536419 RCV002252767
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Aicardi Goutieres syndrome Associate 34417303
Anemia Associate 34417303
Anemia Aplastic Associate 36012751, 36499545, 38597819
Autoimmune enteropathy Associate 31306780
Bone Marrow Failure Disorders Associate 31306780, 38597819
Bone Marrow Neoplasms Associate 38597819
Carcinoma Hepatocellular Associate 25076857
Chromosome 7 monosomy Associate 29146883, 29217778, 30046003, 32770553, 37584291
Condylomata Acuminata Associate 35131475
Congenital Bone Marrow Failure Syndromes Associate 29146883