Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene SNPs miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID	2188
Gene name	FA complementation group F
Gene symbol	FANCF
Synonyms (NCBI Gene)	FAF
Chromosome	11
Chromosome location	11p14.3
Summary	The Fanconi anemia complementation group (FANC) currently includes FANCA, FANCB, FANCC, FANCD1 (also called BRCA2), FANCD2, FANCE, FANCF, FANCG, FANCI, FANCJ (also called BRIP1), FANCL, FANCM and FANCN (also called PALB2). The previously defined group FAN

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SNP ID	Visualize variation	Clinical significance	Consequence
rs104894222	G>A,C	Pathogenic	Stop gained, coding sequence variant, synonymous variant
rs587778340	AG>-	Pathogenic, not-provided	Coding sequence variant, frameshift variant
rs730880277	AGTTCGCTAATCCCGGAACTGGA>-	Pathogenic	Coding sequence variant, frameshift variant
rs730880278	CTCTCTTGGAGTGTCTCCTCATCGGCGTCCCGGACGCCCGGGCCGGG>-	Pathogenic	Coding sequence variant, frameshift variant
rs747622521	A>-	Likely-pathogenic	Frameshift variant, coding sequence variant
rs753272712	G>A	Likely-pathogenic	Stop gained, coding sequence variant
rs1479457172	G>-	Likely-pathogenic	Stop gained, coding sequence variant

353

Show/Hide all (353)

miRTarBase ID	miRNA	Experiments	Reference
MIRT672169	hsa-miR-4755-3p	HITS-CLIP	23824327
MIRT672170	hsa-miR-4284	HITS-CLIP	23824327
MIRT672168	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT672167	hsa-miR-2052	HITS-CLIP	23824327
MIRT672166	hsa-miR-19a-5p	HITS-CLIP	23824327
MIRT672165	hsa-miR-19b-1-5p	HITS-CLIP	23824327
MIRT672164	hsa-miR-19b-2-5p	HITS-CLIP	23824327
MIRT672162	hsa-miR-7977	HITS-CLIP	23824327
MIRT672163	hsa-miR-548s	HITS-CLIP	23824327
MIRT672161	hsa-miR-4701-5p	HITS-CLIP	23824327
MIRT672160	hsa-miR-588	HITS-CLIP	23824327
MIRT672159	hsa-miR-4435	HITS-CLIP	23824327
MIRT672158	hsa-miR-3187-3p	HITS-CLIP	23824327
MIRT567611	hsa-miR-30e-5p	PAR-CLIP	20371350
MIRT567610	hsa-miR-30d-5p	PAR-CLIP	20371350
MIRT567609	hsa-miR-30b-5p	PAR-CLIP	20371350
MIRT567608	hsa-miR-30a-5p	PAR-CLIP	20371350
MIRT567607	hsa-miR-30c-5p	PAR-CLIP	20371350
MIRT567606	hsa-miR-3910	PAR-CLIP	20371350
MIRT567605	hsa-miR-590-3p	PAR-CLIP	20371350
MIRT567604	hsa-miR-5002-5p	PAR-CLIP	20371350
MIRT567603	hsa-miR-1250-3p	PAR-CLIP	20371350
MIRT567602	hsa-miR-153-5p	PAR-CLIP	20371350
MIRT567601	hsa-miR-605-3p	PAR-CLIP	20371350
MIRT567600	hsa-miR-589-5p	PAR-CLIP	20371350
MIRT567599	hsa-miR-146a-5p	PAR-CLIP	20371350
MIRT567598	hsa-miR-146b-5p	PAR-CLIP	20371350
MIRT567597	hsa-miR-7153-5p	PAR-CLIP	20371350
MIRT567596	hsa-miR-4792	PAR-CLIP	20371350
MIRT567595	hsa-miR-4710	PAR-CLIP	20371350
MIRT567594	hsa-miR-5696	PAR-CLIP	20371350
MIRT567593	hsa-miR-579-3p	PAR-CLIP	20371350
MIRT567592	hsa-miR-664b-3p	PAR-CLIP	20371350
MIRT567591	hsa-miR-7855-5p	PAR-CLIP	20371350
MIRT567590	hsa-miR-2054	PAR-CLIP	20371350
MIRT567589	hsa-miR-335-3p	PAR-CLIP	20371350
MIRT567606	hsa-miR-3910	HITS-CLIP	28735896
MIRT567607	hsa-miR-30c-5p	ImmunofluorescenceImmunohistochemistry (IHC)Immunoprecipitaion (IP)In situ hybridizationin vitro cullelar assaysLuciferase reporter assayqRT-PCRWestern blotting	31511498
MIRT672169	hsa-miR-4755-3p	HITS-CLIP	23824327
MIRT672170	hsa-miR-4284	HITS-CLIP	23824327
MIRT672168	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT672167	hsa-miR-2052	HITS-CLIP	23824327
MIRT672166	hsa-miR-19a-5p	HITS-CLIP	23824327
MIRT672165	hsa-miR-19b-1-5p	HITS-CLIP	23824327
MIRT672164	hsa-miR-19b-2-5p	HITS-CLIP	23824327
MIRT672162	hsa-miR-7977	HITS-CLIP	23824327
MIRT672163	hsa-miR-548s	HITS-CLIP	23824327
MIRT672161	hsa-miR-4701-5p	HITS-CLIP	23824327
MIRT672160	hsa-miR-588	HITS-CLIP	23824327
MIRT672159	hsa-miR-4435	HITS-CLIP	23824327
MIRT672158	hsa-miR-3187-3p	HITS-CLIP	23824327
MIRT567611	hsa-miR-30e-5p	PAR-CLIP	20371350
MIRT567610	hsa-miR-30d-5p	PAR-CLIP	20371350
MIRT567609	hsa-miR-30b-5p	PAR-CLIP	20371350
MIRT567608	hsa-miR-30a-5p	PAR-CLIP	20371350
MIRT567607	hsa-miR-30c-5p	PAR-CLIP	20371350
MIRT567606	hsa-miR-3910	PAR-CLIP	20371350
MIRT567605	hsa-miR-590-3p	PAR-CLIP	20371350
MIRT567604	hsa-miR-5002-5p	PAR-CLIP	20371350
MIRT567603	hsa-miR-1250-3p	PAR-CLIP	20371350
MIRT567602	hsa-miR-153-5p	PAR-CLIP	20371350
MIRT567601	hsa-miR-605-3p	PAR-CLIP	20371350
MIRT567600	hsa-miR-589-5p	PAR-CLIP	20371350
MIRT567599	hsa-miR-146a-5p	PAR-CLIP	20371350
MIRT567598	hsa-miR-146b-5p	PAR-CLIP	20371350
MIRT567597	hsa-miR-7153-5p	PAR-CLIP	20371350
MIRT567596	hsa-miR-4792	PAR-CLIP	20371350
MIRT567595	hsa-miR-4710	PAR-CLIP	20371350
MIRT567594	hsa-miR-5696	PAR-CLIP	20371350
MIRT567593	hsa-miR-579-3p	PAR-CLIP	20371350
MIRT567592	hsa-miR-664b-3p	PAR-CLIP	20371350
MIRT567591	hsa-miR-7855-5p	PAR-CLIP	20371350
MIRT567590	hsa-miR-2054	PAR-CLIP	20371350
MIRT567589	hsa-miR-335-3p	PAR-CLIP	20371350
MIRT989088	hsa-miR-1231	CLIP-seq
MIRT989089	hsa-miR-1243	CLIP-seq
MIRT989090	hsa-miR-125a-3p	CLIP-seq
MIRT989091	hsa-miR-1305	CLIP-seq
MIRT989092	hsa-miR-140-3p	CLIP-seq
MIRT989093	hsa-miR-184	CLIP-seq
MIRT989094	hsa-miR-210	CLIP-seq
MIRT989095	hsa-miR-218	CLIP-seq
MIRT989096	hsa-miR-219-2-3p	CLIP-seq
MIRT989097	hsa-miR-24	CLIP-seq
MIRT989098	hsa-miR-2861	CLIP-seq
MIRT989099	hsa-miR-298	CLIP-seq
MIRT989100	hsa-miR-299-3p	CLIP-seq
MIRT989101	hsa-miR-30a	CLIP-seq
MIRT989102	hsa-miR-30b	CLIP-seq
MIRT989103	hsa-miR-30c	CLIP-seq
MIRT989104	hsa-miR-30d	CLIP-seq
MIRT989105	hsa-miR-30e	CLIP-seq
MIRT989106	hsa-miR-3122	CLIP-seq
MIRT989107	hsa-miR-3140-3p	CLIP-seq
MIRT989108	hsa-miR-3148	CLIP-seq
MIRT989109	hsa-miR-320a	CLIP-seq
MIRT989110	hsa-miR-320b	CLIP-seq
MIRT989111	hsa-miR-320c	CLIP-seq
MIRT989112	hsa-miR-320d	CLIP-seq
MIRT989113	hsa-miR-331-3p	CLIP-seq
MIRT989114	hsa-miR-337-5p	CLIP-seq
MIRT989115	hsa-miR-338-3p	CLIP-seq
MIRT989116	hsa-miR-33a	CLIP-seq
MIRT989117	hsa-miR-33b	CLIP-seq
MIRT989118	hsa-miR-3613-5p	CLIP-seq
MIRT989119	hsa-miR-3654	CLIP-seq
MIRT989120	hsa-miR-3660	CLIP-seq
MIRT989121	hsa-miR-3672	CLIP-seq
MIRT989122	hsa-miR-3689a-3p	CLIP-seq
MIRT989123	hsa-miR-3689c	CLIP-seq
MIRT989124	hsa-miR-3692	CLIP-seq
MIRT989125	hsa-miR-3913-5p	CLIP-seq
MIRT989126	hsa-miR-3934	CLIP-seq
MIRT989127	hsa-miR-3940-5p	CLIP-seq
MIRT989128	hsa-miR-3974	CLIP-seq
MIRT989129	hsa-miR-421	CLIP-seq
MIRT989130	hsa-miR-4288	CLIP-seq
MIRT989131	hsa-miR-4292	CLIP-seq
MIRT989132	hsa-miR-4318	CLIP-seq
MIRT989133	hsa-miR-4429	CLIP-seq
MIRT989134	hsa-miR-4436b-3p	CLIP-seq
MIRT989135	hsa-miR-4457	CLIP-seq
MIRT989136	hsa-miR-4459	CLIP-seq
MIRT989137	hsa-miR-4475	CLIP-seq
MIRT989138	hsa-miR-4477a	CLIP-seq
MIRT989139	hsa-miR-4485	CLIP-seq
MIRT989140	hsa-miR-4491	CLIP-seq
MIRT989141	hsa-miR-4507	CLIP-seq
MIRT989142	hsa-miR-452	CLIP-seq
MIRT989143	hsa-miR-4526	CLIP-seq
MIRT989144	hsa-miR-4643	CLIP-seq
MIRT989145	hsa-miR-4657	CLIP-seq
MIRT989146	hsa-miR-466	CLIP-seq
MIRT989147	hsa-miR-4668-5p	CLIP-seq
MIRT989148	hsa-miR-4676-3p	CLIP-seq
MIRT989149	hsa-miR-4691-3p	CLIP-seq
MIRT989150	hsa-miR-4693-5p	CLIP-seq
MIRT989151	hsa-miR-4728-5p	CLIP-seq
MIRT989152	hsa-miR-4786-5p	CLIP-seq
MIRT989153	hsa-miR-4789-3p	CLIP-seq
MIRT989154	hsa-miR-4793-3p	CLIP-seq
MIRT989155	hsa-miR-4799-5p	CLIP-seq
MIRT989156	hsa-miR-511	CLIP-seq
MIRT989157	hsa-miR-513b	CLIP-seq
MIRT989158	hsa-miR-520d-5p	CLIP-seq
MIRT989159	hsa-miR-524-5p	CLIP-seq
MIRT989160	hsa-miR-539	CLIP-seq
MIRT989161	hsa-miR-543	CLIP-seq
MIRT989162	hsa-miR-548aa	CLIP-seq
MIRT989163	hsa-miR-548g	CLIP-seq
MIRT989164	hsa-miR-548t	CLIP-seq
MIRT989165	hsa-miR-553	CLIP-seq
MIRT989166	hsa-miR-579	CLIP-seq
MIRT989167	hsa-miR-600	CLIP-seq
MIRT989168	hsa-miR-624	CLIP-seq
MIRT989169	hsa-miR-632	CLIP-seq
MIRT989170	hsa-miR-633	CLIP-seq
MIRT989171	hsa-miR-636	CLIP-seq
MIRT989172	hsa-miR-663b	CLIP-seq
MIRT989173	hsa-miR-668	CLIP-seq
MIRT989174	hsa-miR-764	CLIP-seq
MIRT989175	hsa-miR-769-5p	CLIP-seq
MIRT989176	hsa-miR-892a	CLIP-seq
MIRT1993092	hsa-miR-1200	CLIP-seq
MIRT1993093	hsa-miR-1245	CLIP-seq
MIRT1993094	hsa-miR-1283	CLIP-seq
MIRT1993095	hsa-miR-1297	CLIP-seq
MIRT1993096	hsa-miR-146a	CLIP-seq
MIRT1993097	hsa-miR-26a	CLIP-seq
MIRT1993098	hsa-miR-26b	CLIP-seq
MIRT989101	hsa-miR-30a	CLIP-seq
MIRT989102	hsa-miR-30b	CLIP-seq
MIRT989103	hsa-miR-30c	CLIP-seq
MIRT989104	hsa-miR-30d	CLIP-seq
MIRT989105	hsa-miR-30e	CLIP-seq
MIRT1993099	hsa-miR-3117-5p	CLIP-seq
MIRT989107	hsa-miR-3140-3p	CLIP-seq
MIRT989109	hsa-miR-320a	CLIP-seq
MIRT989110	hsa-miR-320b	CLIP-seq
MIRT989111	hsa-miR-320c	CLIP-seq
MIRT989112	hsa-miR-320d	CLIP-seq
MIRT989124	hsa-miR-3692	CLIP-seq
MIRT1993100	hsa-miR-380	CLIP-seq
MIRT1993101	hsa-miR-4272	CLIP-seq
MIRT1993102	hsa-miR-4426	CLIP-seq
MIRT989133	hsa-miR-4429	CLIP-seq
MIRT989134	hsa-miR-4436b-3p	CLIP-seq
MIRT1993103	hsa-miR-4465	CLIP-seq
MIRT989144	hsa-miR-4643	CLIP-seq
MIRT1993104	hsa-miR-4647	CLIP-seq
MIRT989146	hsa-miR-466	CLIP-seq
MIRT1993105	hsa-miR-4662b	CLIP-seq
MIRT989149	hsa-miR-4691-3p	CLIP-seq
MIRT989153	hsa-miR-4789-3p	CLIP-seq
MIRT989155	hsa-miR-4799-5p	CLIP-seq
MIRT1993106	hsa-miR-548c-3p	CLIP-seq
MIRT989163	hsa-miR-548g	CLIP-seq
MIRT989165	hsa-miR-553	CLIP-seq
MIRT989166	hsa-miR-579	CLIP-seq
MIRT1993107	hsa-miR-589	CLIP-seq
MIRT1993108	hsa-miR-648	CLIP-seq
MIRT989173	hsa-miR-668	CLIP-seq
MIRT1993109	hsa-miR-889	CLIP-seq
MIRT2227006	hsa-miR-1202	CLIP-seq
MIRT2227007	hsa-miR-1228	CLIP-seq
MIRT989090	hsa-miR-125a-3p	CLIP-seq
MIRT2227008	hsa-miR-1262	CLIP-seq
MIRT1993095	hsa-miR-1297	CLIP-seq
MIRT989091	hsa-miR-1305	CLIP-seq
MIRT1993096	hsa-miR-146a	CLIP-seq
MIRT989093	hsa-miR-184	CLIP-seq
MIRT989097	hsa-miR-24	CLIP-seq
MIRT1993097	hsa-miR-26a	CLIP-seq
MIRT1993098	hsa-miR-26b	CLIP-seq
MIRT989101	hsa-miR-30a	CLIP-seq
MIRT989102	hsa-miR-30b	CLIP-seq
MIRT989103	hsa-miR-30c	CLIP-seq
MIRT989104	hsa-miR-30d	CLIP-seq
MIRT989105	hsa-miR-30e	CLIP-seq
MIRT1993099	hsa-miR-3117-5p	CLIP-seq
MIRT989106	hsa-miR-3122	CLIP-seq
MIRT989108	hsa-miR-3148	CLIP-seq
MIRT2227009	hsa-miR-3194-5p	CLIP-seq
MIRT989109	hsa-miR-320a	CLIP-seq
MIRT989110	hsa-miR-320b	CLIP-seq
MIRT989111	hsa-miR-320c	CLIP-seq
MIRT989112	hsa-miR-320d	CLIP-seq
MIRT989115	hsa-miR-338-3p	CLIP-seq
MIRT2227010	hsa-miR-3613-3p	CLIP-seq
MIRT989121	hsa-miR-3672	CLIP-seq
MIRT989122	hsa-miR-3689a-3p	CLIP-seq
MIRT989123	hsa-miR-3689c	CLIP-seq
MIRT989125	hsa-miR-3913-5p	CLIP-seq
MIRT2227011	hsa-miR-3925-3p	CLIP-seq
MIRT2227012	hsa-miR-3929	CLIP-seq
MIRT989126	hsa-miR-3934	CLIP-seq
MIRT2227013	hsa-miR-3972	CLIP-seq
MIRT989128	hsa-miR-3974	CLIP-seq
MIRT989129	hsa-miR-421	CLIP-seq
MIRT1993101	hsa-miR-4272	CLIP-seq
MIRT2227014	hsa-miR-4325	CLIP-seq
MIRT2227015	hsa-miR-4419b	CLIP-seq
MIRT989133	hsa-miR-4429	CLIP-seq
MIRT989135	hsa-miR-4457	CLIP-seq
MIRT1993103	hsa-miR-4465	CLIP-seq
MIRT2227016	hsa-miR-4478	CLIP-seq
MIRT989142	hsa-miR-452	CLIP-seq
MIRT2227017	hsa-miR-4668-3p	CLIP-seq
MIRT989148	hsa-miR-4676-3p	CLIP-seq
MIRT2227018	hsa-miR-4701-3p	CLIP-seq
MIRT989151	hsa-miR-4728-5p	CLIP-seq
MIRT989152	hsa-miR-4786-5p	CLIP-seq
MIRT989154	hsa-miR-4793-3p	CLIP-seq
MIRT2227019	hsa-miR-485-5p	CLIP-seq
MIRT2227020	hsa-miR-508-5p	CLIP-seq
MIRT989157	hsa-miR-513b	CLIP-seq
MIRT2227021	hsa-miR-515-5p	CLIP-seq
MIRT989158	hsa-miR-520d-5p	CLIP-seq
MIRT989159	hsa-miR-524-5p	CLIP-seq
MIRT2227022	hsa-miR-542-3p	CLIP-seq
MIRT989161	hsa-miR-543	CLIP-seq
MIRT1993106	hsa-miR-548c-3p	CLIP-seq
MIRT989163	hsa-miR-548g	CLIP-seq
MIRT989166	hsa-miR-579	CLIP-seq
MIRT1993107	hsa-miR-589	CLIP-seq
MIRT989167	hsa-miR-600	CLIP-seq
MIRT2227023	hsa-miR-622	CLIP-seq
MIRT989168	hsa-miR-624	CLIP-seq
MIRT989173	hsa-miR-668	CLIP-seq
MIRT989174	hsa-miR-764	CLIP-seq
MIRT989175	hsa-miR-769-5p	CLIP-seq
MIRT2227024	hsa-miR-890	CLIP-seq
MIRT2387890	hsa-miR-4468	CLIP-seq
MIRT2387891	hsa-miR-4519	CLIP-seq
MIRT2449465	hsa-miR-1539	CLIP-seq
MIRT989093	hsa-miR-184	CLIP-seq
MIRT989106	hsa-miR-3122	CLIP-seq
MIRT989115	hsa-miR-338-3p	CLIP-seq
MIRT2227010	hsa-miR-3613-3p	CLIP-seq
MIRT2449466	hsa-miR-3622b-5p	CLIP-seq
MIRT989122	hsa-miR-3689a-3p	CLIP-seq
MIRT989123	hsa-miR-3689c	CLIP-seq
MIRT989125	hsa-miR-3913-5p	CLIP-seq
MIRT2449467	hsa-miR-4253	CLIP-seq
MIRT2449468	hsa-miR-4684-5p	CLIP-seq
MIRT989151	hsa-miR-4728-5p	CLIP-seq
MIRT989152	hsa-miR-4786-5p	CLIP-seq
MIRT1993106	hsa-miR-548c-3p	CLIP-seq
MIRT989175	hsa-miR-769-5p	CLIP-seq
MIRT2227008	hsa-miR-1262	CLIP-seq
MIRT2530818	hsa-miR-1321	CLIP-seq
MIRT2449465	hsa-miR-1539	CLIP-seq
MIRT989093	hsa-miR-184	CLIP-seq
MIRT2530819	hsa-miR-186	CLIP-seq
MIRT1993099	hsa-miR-3117-5p	CLIP-seq
MIRT989106	hsa-miR-3122	CLIP-seq
MIRT2530820	hsa-miR-3126-5p	CLIP-seq
MIRT2530821	hsa-miR-3133	CLIP-seq
MIRT989108	hsa-miR-3148	CLIP-seq
MIRT2530822	hsa-miR-329	CLIP-seq
MIRT989115	hsa-miR-338-3p	CLIP-seq
MIRT2227010	hsa-miR-3613-3p	CLIP-seq
MIRT2449466	hsa-miR-3622b-5p	CLIP-seq
MIRT2530823	hsa-miR-362-3p	CLIP-seq
MIRT2530824	hsa-miR-3685	CLIP-seq
MIRT989122	hsa-miR-3689a-3p	CLIP-seq
MIRT989123	hsa-miR-3689c	CLIP-seq
MIRT989124	hsa-miR-3692	CLIP-seq
MIRT2530825	hsa-miR-371-5p	CLIP-seq
MIRT2530826	hsa-miR-371b-5p	CLIP-seq
MIRT989125	hsa-miR-3913-5p	CLIP-seq
MIRT2227011	hsa-miR-3925-3p	CLIP-seq
MIRT2530827	hsa-miR-3941	CLIP-seq
MIRT2530828	hsa-miR-412	CLIP-seq
MIRT2449467	hsa-miR-4253	CLIP-seq
MIRT2530829	hsa-miR-4419a	CLIP-seq
MIRT989134	hsa-miR-4436b-3p	CLIP-seq
MIRT989135	hsa-miR-4457	CLIP-seq
MIRT2530830	hsa-miR-4510	CLIP-seq
MIRT989142	hsa-miR-452	CLIP-seq
MIRT989147	hsa-miR-4668-5p	CLIP-seq
MIRT989148	hsa-miR-4676-3p	CLIP-seq
MIRT2449468	hsa-miR-4684-5p	CLIP-seq
MIRT989149	hsa-miR-4691-3p	CLIP-seq
MIRT2227018	hsa-miR-4701-3p	CLIP-seq
MIRT989151	hsa-miR-4728-5p	CLIP-seq
MIRT2530831	hsa-miR-4739	CLIP-seq
MIRT2530832	hsa-miR-4756-5p	CLIP-seq
MIRT989152	hsa-miR-4786-5p	CLIP-seq
MIRT989154	hsa-miR-4793-3p	CLIP-seq
MIRT989155	hsa-miR-4799-5p	CLIP-seq
MIRT2227020	hsa-miR-508-5p	CLIP-seq
MIRT989157	hsa-miR-513b	CLIP-seq
MIRT2227022	hsa-miR-542-3p	CLIP-seq
MIRT1993106	hsa-miR-548c-3p	CLIP-seq
MIRT989163	hsa-miR-548g	CLIP-seq
MIRT2530833	hsa-miR-603	CLIP-seq
MIRT2227023	hsa-miR-622	CLIP-seq
MIRT989175	hsa-miR-769-5p	CLIP-seq
MIRT989093	hsa-miR-184	CLIP-seq
MIRT989106	hsa-miR-3122	CLIP-seq
MIRT989115	hsa-miR-338-3p	CLIP-seq
MIRT2227010	hsa-miR-3613-3p	CLIP-seq
MIRT2449466	hsa-miR-3622b-5p	CLIP-seq
MIRT989122	hsa-miR-3689a-3p	CLIP-seq
MIRT989123	hsa-miR-3689c	CLIP-seq
MIRT989125	hsa-miR-3913-5p	CLIP-seq
MIRT2449467	hsa-miR-4253	CLIP-seq
MIRT2449468	hsa-miR-4684-5p	CLIP-seq
MIRT989151	hsa-miR-4728-5p	CLIP-seq
MIRT989152	hsa-miR-4786-5p	CLIP-seq
MIRT1993106	hsa-miR-548c-3p	CLIP-seq
MIRT989175	hsa-miR-769-5p	CLIP-seq

Show/Hide all (15)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000785	Component	Chromatin	IDA	22343915
GO:0005515	Function	Protein binding	IPI	11063725, 12649160, 32296183, 32814053
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005829	Component	Cytosol	TAS
GO:0006281	Process	DNA repair	IEA
GO:0006974	Process	DNA damage response	IBA
GO:0006974	Process	DNA damage response	IEA
GO:0036297	Process	Interstrand cross-link repair	IEA
GO:0036297	Process	Interstrand cross-link repair	NAS	19965384
GO:0043240	Component	Fanconi anaemia nuclear complex	IBA
GO:0043240	Component	Fanconi anaemia nuclear complex	IDA	20347428
GO:0043240	Component	Fanconi anaemia nuclear complex	IEA
GO:0043240	Component	Fanconi anaemia nuclear complex	NAS	22343915

MIM	HGNC	e!Ensembl
613897	3587	ENSG00000183161

Q9NPI8

Protein name

Fanconi anemia group F protein (Protein FACF)

Protein function

DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability (By similarity).

PDB

2IQC , 7KZP , 7KZQ , 7KZR , 7KZS , 7KZT , 7KZV

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF11107	FANCF	1 → 354	Fanconi anemia group F protein (FANCF)	Family

Sequence

MESLLQHLDRFSELLAVSSTTYVSTWDPATVRRALQWARYLRHIHRRFGRHGPIRTALER
RLHNQWRQEGGFGRGPVPGLANFQALGHCDVLLSLRLLENRALGDAARYHLVQQLFPGPG
VRDADEETLQESLARLARRRSAVHMLRFNGYRENPNLQEDSLMKTQAELLLERLQEVGKA
EAERPARFLSSLWERLPQNNFLKVIAVALLQPPLSRRPQEELEPGIHKSPGEGSQVLVHW
LLGNSEVFAAFCRALPAGLLTLVTSRHPALSPVYLGLLTDWGQRLHYDLQKGIWVGTESQ
DVPWEELHNRFQSLCQAPPPLKDKVLTALETCKAQDGDFEVPGLSIWTDLLLALRSGAFR
KRQVLGLSAGLSSV

Sequence length

374

Interactions

View interactions

	KEGG		Reactome
	Fanconi anemia pathway		Fanconi Anemia Pathway

586

Show/Hide Causal Diseases (3)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
FANCF-related disorder	Pathogenic; Likely pathogenic	rs587778340, rs1858634789, rs1479457172	RCV004752688 RCV003412456 RCV004753158
Fanconi anemia	Pathogenic; Likely pathogenic	rs2133798885, rs2133797345, rs2133798927, rs2133798073, rs1046564488, rs747622521, rs2494871663, rs2494869728, rs2494866075, rs730880277, rs587778340, rs2494871401, rs2133797511, rs2494867744, rs2494870839 View all (9 more)	RCV001389253 RCV001615378 RCV001970176 RCV001982108 RCV002255797 RCV002258415 RCV002517907 RCV002880987 RCV002966515 RCV002994700 RCV000472440 RCV000820044 RCV003016325 RCV003048995 RCV003636016 RCV003636026 RCV003636027 RCV003523185 RCV003636521 RCV000462200 RCV003769334 RCV002271604 RCV001050876 RCV001382650 RCV001383708
Fanconi anemia complementation group F	Likely pathogenic; Pathogenic	rs754014970, rs2133798885, rs778546226, rs2133797515, rs2133798188, rs747622521, rs2494866075, rs730880277, rs104894221, rs587778340, rs104894222, rs2494867744, rs2494861863, rs2494870839, rs762741561 View all (20 more)	RCV005046692 RCV003469754 RCV001520573 RCV001520576 RCV002254006 RCV000190586 RCV004686755 RCV000006712 RCV000006714 RCV000006715 RCV000006716 RCV003459861 RCV003461482 RCV003461483 RCV003468149 RCV003461485 RCV003461486 RCV003468150 RCV003461487 RCV003461488 RCV003461489 RCV003468151 RCV004576565 RCV004576566 RCV004576567 RCV004576568 RCV004576569 RCV004576570 RCV004576571 RCV005049558 RCV001194788 RCV001194785 RCV001194787 RCV001194786 RCV001194784

Show/Hide Unknown Diseases (4)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Hereditary cancer	Conflicting classifications of pathogenicity	rs145057187	RCV003492014
Hereditary cancer-predisposing syndrome	Benign; Likely benign; Uncertain significance	rs113910234, rs746409614, rs996275860	RCV005251074 RCV005859363 RCV005638646
Malignant tumor of breast	Benign; Likely benign	rs113910234	RCV001269490
Ovarian cancer	Benign; Likely benign; Conflicting classifications of pathogenicity	rs113910234, rs372625322, rs2133797874	RCV003153394 RCV003153540 RCV003154739

Show/Hide Text Mining Associations (25)

Disease Name	Relationship Type	References
Associations from Text MiningDisease associations identified through Pubtator
Anemia Hemolytic	Associate	11167740, 14617007, 16803569
Breast Diseases	Associate	23440494
Breast Neoplasms	Associate	17932744, 22952942, 23440494, 24345874
Carcinogenesis	Associate	14617007
Carcinoma Non Small Cell Lung	Associate	25828518
Carcinoma Squamous Cell	Associate	29617660
Colorectal Neoplasms	Associate	32915143
Fanconi Anemia	Associate	11001585, 11750104, 12239156, 15256425, 16127171, 17082180, 19405097, 29973652, 31288759, 9382107
Fanconi Anemia	Stimulate	23440494
Granulosa Cell Tumor	Associate	15574200
Growth Disorders	Associate	31288759
Hematologic Diseases	Associate	31288759
Hereditary pancreatitis	Associate	28687971
Hyperpigmentation	Associate	31288759
Lung Neoplasms	Associate	26385482, 26438152
Mesothelioma Malignant	Associate	28687356
Microcephaly	Associate	31288759
Neoplasms	Associate	15574200, 18607065, 28687971, 32778095, 32915143
Neoplasms	Inhibit	22315424
Ovarian Neoplasms	Associate	18414472, 22537224, 23440494, 30822218
Pancytopenia	Associate	31288759
Precursor T Cell Lymphoblastic Leukemia Lymphoma	Associate	14617007
Red Cell Aplasia Pure	Associate	29767669
Sleep Deprivation	Stimulate	22952942
Stomach Neoplasms	Associate	24748501

FANCF (FA complementation group F)