TSNARE1 (t-SNARE domain containing 1)

Gene

• Entrez ID: 203062
• Gene name: T-SNARE domain containing 1
• Gene symbol: TSNARE1
• Synonyms (NCBI Gene): -
• Chromosome: 8
• Chromosome location: 8q24.3

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT017957	hsa-miR-335-5p	Microarray	18185580
MIRT514820	hsa-miR-5011-5p	HITS-CLIP	21572407
MIRT514819	hsa-miR-190a-3p	HITS-CLIP	21572407
MIRT514818	hsa-miR-3924	HITS-CLIP	21572407
MIRT514817	hsa-miR-1277-5p	HITS-CLIP	21572407
MIRT514820	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT514819	hsa-miR-190a-3p	HITS-CLIP	23313552
MIRT514818	hsa-miR-3924	HITS-CLIP	23313552
MIRT514817	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT514820	hsa-miR-5011-5p	PAR-CLIP	20371350
MIRT514819	hsa-miR-190a-3p	PAR-CLIP	20371350
MIRT514818	hsa-miR-3924	PAR-CLIP	20371350
MIRT514817	hsa-miR-1277-5p	PAR-CLIP	20371350
MIRT514820	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT514819	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT514818	hsa-miR-3924	PAR-CLIP	21572407
MIRT514817	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT514821	hsa-miR-1295b-3p	PAR-CLIP	23446348
MIRT514820	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT514819	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT514818	hsa-miR-3924	PAR-CLIP	23446348
MIRT514817	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT514820	hsa-miR-5011-5p	HITS-CLIP	21572407
MIRT514819	hsa-miR-190a-3p	HITS-CLIP	21572407
MIRT514818	hsa-miR-3924	HITS-CLIP	21572407
MIRT514817	hsa-miR-1277-5p	HITS-CLIP	21572407
MIRT514820	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT514819	hsa-miR-190a-3p	HITS-CLIP	23313552
MIRT514818	hsa-miR-3924	HITS-CLIP	23313552
MIRT514817	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT514820	hsa-miR-5011-5p	PAR-CLIP	20371350
MIRT514819	hsa-miR-190a-3p	PAR-CLIP	20371350
MIRT514818	hsa-miR-3924	PAR-CLIP	20371350
MIRT514817	hsa-miR-1277-5p	PAR-CLIP	20371350
MIRT514820	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT514819	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT514818	hsa-miR-3924	PAR-CLIP	21572407
MIRT514817	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT514821	hsa-miR-1295b-3p	PAR-CLIP	23446348
MIRT514820	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT514819	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT514818	hsa-miR-3924	PAR-CLIP	23446348
MIRT514817	hsa-miR-1277-5p	PAR-CLIP	23446348

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000149	Function	SNARE binding	IBA
GO:0005484	Function	SNAP receptor activity	IBA
GO:0006886	Process	Intracellular protein transport	IBA
GO:0006906	Process	Vesicle fusion	IBA
GO:0008021	Component	Synaptic vesicle	IBA
GO:0012505	Component	Endomembrane system	IBA
GO:0016020	Component	Membrane	IEA
GO:0016192	Process	Vesicle-mediated transport	IEA
GO:0031201	Component	SNARE complex	IBA
GO:0048278	Process	Vesicle docking	IBA

Other IDs

• MIM: 620986
• HGNC: 26437
• e!Ensembl: ENSG00000171045

Protein

• UniProt ID: Q96NA8
• Protein name: t-SNARE domain-containing protein 1
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF13873	Myb_DNA-bind_5	124 → 201	Myb/SANT-like DNA-binding domain	Domain
  PF14523	Syntaxin_2	264 → 368	Syntaxin-like protein	Domain
  PF05739	SNARE	452 → 504	SNARE domain	Family

• Sequence:

  MSYGSIARGGGLGSRGPFGGPSRQGCQPLECARCWTEYGIRHFPCPSPESKLQNRCVGKD
  GEGDLGPAGTPIVPRARKRGPGVAPEGSRMPEPTSSPTIGPRKDSAAGPHGRMAGPSTTR
  AKKRKPNFCPQETEVLVSKVSKHHQLLFGTGLLKAEPTRRYRVWSRILQAVNALGYCRRD
  VVDLKHKWRDLRAVVRRKLGDLRKAAHGPSPGSGKPQALALTPVEQVVAKTFSCQALPSE
  GFSLEPPRATQVDPCNLQELFQEMSANVFRINSSVTSLERSLQSLGTPSDTQELRDSLHT
  AQQETNKTIAASASSVKQMAELLRSSCPQERLQQERPQLDRLKTQLSDAIQCYGVVQKKI
  AEKSRALLPMAQRGSKQSPQAPFAELADDEKVFNGSDNMWQGQEQALLPDITEEDLEAIR
  LREEAILQMESNLLDVNQIIKDLASMVSEQGEAVDSIEASLEAASSHAEAARQLLAGASR
  HQLQRHKIKCCFLSAGVTALLVIIIIIATSVRK

• Sequence length: 513