Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
196740
Gene name Gene Name - the full gene name approved by the HGNC.
V-set and transmembrane domain containing 4
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
VSTM4
Synonyms (NCBI Gene) Gene synonyms aliases
C10orf72
Chromosome Chromosome number
10
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
10q11.23
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT665482 hsa-miR-6890-3p HITS-CLIP 23824327
MIRT665481 hsa-miR-1247-3p HITS-CLIP 23824327
MIRT665480 hsa-miR-4532 HITS-CLIP 23824327
MIRT665479 hsa-miR-4485-5p HITS-CLIP 23824327
MIRT665478 hsa-miR-1281 HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 32296183
GO:0005576 Component Extracellular region IEA
GO:0005886 Component Plasma membrane IEA
GO:0016021 Component Integral component of membrane IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein
UniProt ID Q8IW00
Protein name V-set and transmembrane domain-containing protein 4 [Cleaved into: Peptide Lv]
Protein function Peptide Lv enhances L-type voltage-gated calcium channel (L-VGCC) currents in retinal photoreceptors.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07686 V-set 29 149 Immunoglobulin V-set domain Domain
Sequence
MRLLALAAAALLARAPAPEVCAALNVTVSPGPVVDYLEGENATLLCHVSQKRRKDSLLAV
RWFFAHSFDSQEALMVKMTKLRVVQYYGNFSRSAKRRRLRLLEEQRGALYRLSVLTLQPS
DQGHYVCRVQEISRHRNKWTAWSNGSSAT
EMRVISLKASEESSFEKTKETWAFFEDLYVY
AVLVCCVGILSILLFMLVIVWQSVFNKRKSRVRHYLVKCPQNSSGETVTSVTSLAPLQPK
KGKRQKEKPDIPPAVPAKAPIAPTFHKPKLLKPQRKVTLPKIAEENLTYAELELIKPHRA
AKGAPTSTVYAQILFEENKL
Sequence length 320
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Colorectal cancer Colorectal Carcinoma rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
Migraine Migraine Disorders rs794727411 23793025
Unknown
Disease term Disease name Evidence References Source
Migraine with aura Migraine with Aura 23793025 ClinVar
Migraine with Aura Migraine with Aura GWAS