Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
196740
Gene name Gene Name - the full gene name approved by the HGNC.
V-set and transmembrane domain containing 4
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
VSTM4
Synonyms (NCBI Gene) Gene synonyms aliases
C10orf72
Chromosome Chromosome number
10
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
10q11.23
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT665482 hsa-miR-6890-3p HITS-CLIP 23824327
MIRT665481 hsa-miR-1247-3p HITS-CLIP 23824327
MIRT665480 hsa-miR-4532 HITS-CLIP 23824327
MIRT665479 hsa-miR-4485-5p HITS-CLIP 23824327
MIRT665478 hsa-miR-1281 HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001935 Process Endothelial cell proliferation IEA
GO:0002040 Process Sprouting angiogenesis IEA
GO:0005515 Function Protein binding IPI 32296183
GO:0005576 Component Extracellular region IEA
GO:0005886 Component Plasma membrane IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein
UniProt ID Q8IW00
Protein name V-set and transmembrane domain-containing protein 4 [Cleaved into: Peptide Lv]
Protein function Peptide Lv enhances L-type voltage-gated calcium channel (L-VGCC) currents in retinal photoreceptors.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07686 V-set 29 149 Immunoglobulin V-set domain Domain
Sequence
MRLLALAAAALLARAPAPEVCAALNVTVSPGPVVDYLEGENATLLCHVSQKRRKDSLLAV
RWFFAHSFDSQEALMVKMTKLRVVQYYGNFSRSAKRRRLRLLEEQRGALYRLSVLTLQPS
DQGHYVCRVQEISRHRNKWTAWSNGSSAT
EMRVISLKASEESSFEKTKETWAFFEDLYVY
AVLVCCVGILSILLFMLVIVWQSVFNKRKSRVRHYLVKCPQNSSGETVTSVTSLAPLQPK
KGKRQKEKPDIPPAVPAKAPIAPTFHKPKLLKPQRKVTLPKIAEENLTYAELELIKPHRA
AKGAPTSTVYAQILFEENKL
Sequence length 320
Interactions View interactions
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Migraine with Aura Migraine with aura N/A N/A GWAS