Gene Gene information from NCBI Gene database.
Entrez ID 1950
Gene name Epidermal growth factor
Gene symbol EGF
Synonyms (NCBI Gene)
HOMG4URG
Chromosome 4
Chromosome location 4q25
Summary This gene encodes a member of the epidermal growth factor superfamily. The encoded preproprotein is proteolytically processed to generate the 53-amino acid epidermal growth factor peptide. This protein acts a potent mitogenic factor that plays an importan
SNPs SNP information provided by dbSNP.
2
SNP ID Visualize variation Clinical significance Consequence
rs4444903 A>C,G Benign, drug-response 5 prime UTR variant, upstream transcript variant, genic upstream transcript variant, non coding transcript variant
rs121434567 C>T Pathogenic Missense variant, coding sequence variant, genic downstream transcript variant, non coding transcript variant
miRNA miRNA information provided by mirtarbase database.
146
miRTarBase ID miRNA Experiments Reference
MIRT460845 hsa-miR-6808-5p PAR-CLIP 21572407
MIRT460844 hsa-miR-6893-5p PAR-CLIP 21572407
MIRT460843 hsa-miR-940 PAR-CLIP 21572407
MIRT460842 hsa-miR-4459 PAR-CLIP 21572407
MIRT460841 hsa-miR-4433a-3p PAR-CLIP 21572407
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
SP1 Unknown 2833511
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
82
GO ID Ontology Definition Evidence Reference
GO:0001525 Process Angiogenesis IDA 15611079
GO:0001938 Process Positive regulation of endothelial cell proliferation IDA 31915155
GO:0002092 Process Positive regulation of receptor internalization IDA 22732145
GO:0005085 Function Guanyl-nucleotide exchange factor activity IDA 20353436
GO:0005154 Function Epidermal growth factor receptor binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
131530 3229 ENSG00000138798
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P01133
Protein name Pro-epidermal growth factor (EGF) [Cleaved into: Epidermal growth factor (Urogastrone)]
Protein function EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagemen
PDB 1IVO , 1JL9 , 1NQL , 1P9J , 2KV4 , 3NJP , 7OM4 , 7SYD , 7SYE , 7SZ0 , 7SZ1 , 8HGO , 8HGS
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF07645 EGF_CA 356 395 Calcium-binding EGF domain Domain
PF00058 Ldl_recept_b 524 564 Low-density lipoprotein receptor repeat class B Repeat
PF00058 Ldl_recept_b 567 607 Low-density lipoprotein receptor repeat class B Repeat
PF00058 Ldl_recept_b 610 651 Low-density lipoprotein receptor repeat class B Repeat
PF00058 Ldl_recept_b 654 694 Low-density lipoprotein receptor repeat class B Repeat
PF14670 FXa_inhibition 745 780 Domain
PF07645 EGF_CA 870 910 Calcium-binding EGF domain Domain
PF07645 EGF_CA 912 948 Calcium-binding EGF domain Domain
PF00008 EGF 976 1011 EGF-like domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in kidney, salivary gland, cerebrum and prostate. {ECO:0000269|PubMed:17671655}.
Sequence
MLLTLIILLPVVSKFSFVSLSAPQHWSCPEGTLAGNGNSTCVGPAPFLIFSHGNSIFRID
TEGTNYEQLVVDAGVSVIMDFHYNEKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNVSG
MAINWINEEVIWSNQQEGIITVTDMKGNNSHILLSALKYPANVAVDPVERFIFWSSEVAG
SLYRADLDGVGVKALLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVHI
SKHPTQHNLFAMSLFGDRIFYSTWKMKTIWIANKHTGKDMVRINLHSSFVPLGELKVVHP
LAQPKAEDDTWEPEQKLCKLRKGNCSSTVCGQDLQSHLCMCAEGYALSRDRKYCEDVNEC
AFWNHGCTLGCKNTPGSYYCTCPVGFVLLPDGKRC
HQLVSCPRNVSECSHDCVLTSEGPL
CFCPEGSVLERDGKTCSGCSSPDNGGCSQLCVPLSPVSWECDCFPGYDLQLDEKSCAASG
PQPFLLFANSQDIRHMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERAN
MDGSQRERLIEEGVDVPEGLAVDW
IGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQP
RGIAVHP
MAKRLFWTDTGINPRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCD
AKQSVIEMANLDGSKRRRLTQNDVGHPFAVAVFE
DYVWFSDWAMPSVMRVNKRTGKDRVR
LQGSMLKPSSLVVVHPLAKPGADPCLYQNGGCEHICKKRLGTAWCSCREGFMKASDGKTC
LALDGHQLLAGGEVDLKNQVTPLDILSKTRVSEDNITESQHMLVAEIMVSDQDDCAPVGC
SMYARCISEGEDATCQCLKGFAGDGKLCSDIDECEMGVPVCPPASSKCINTEGGYVCRCS
EGYQGDGIHC
LDIDECQLGEHSCGENASCTNTEGGYTCMCAGRLSEPGLICPDSTPPPHL
REDDHHYSVRNSDSECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDLKWW
ELRHAGHGQQQKVIVVAVCVVVLVMLLLLSLWGAHYYRTQKLLSKNPKNPYEESSRDVRS
RRPADTEDGMSSCPQPWFVVIKEHQDLKNGGQPVAGEDGQAADGSMQPTSWRQEPQLCGM
GTEQGCWIPVSSDKGSCPQVMERSFHMPSYGTQTLEGGVEKPHSLLSANPLWQQRALDPP
HQMELTQ
Sequence length 1207
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  EGFR tyrosine kinase inhibitor resistance
MAPK signaling pathway
ErbB signaling pathway
Ras signaling pathway
Rap1 signaling pathway
Calcium signaling pathway
HIF-1 signaling pathway
FoxO signaling pathway
Phospholipase D signaling pathway
PI3K-Akt signaling pathway
Focal adhesion
Gap junction
JAK-STAT signaling pathway
Regulation of actin cytoskeleton
Hepatitis C
Human papillomavirus infection
Pathways in cancer
Chemical carcinogenesis - receptor activation
Chemical carcinogenesis - reactive oxygen species
Colorectal cancer
Pancreatic cancer
Endometrial cancer
Glioma
Prostate cancer
Melanoma
Bladder cancer
Non-small cell lung cancer
Breast cancer
Gastric cancer
Choline metabolism in cancer
PD-L1 expression and PD-1 checkpoint pathway in cancer
  Platelet degranulation
Signaling by ERBB2
Constitutive Signaling by Ligand-Responsive EGFR Cancer Variants
Signaling by ERBB4
SHC1 events in ERBB2 signaling
PIP3 activates AKT signaling
Signaling by EGFR
GRB2 events in EGFR signaling
GAB1 signalosome
SHC1 events in EGFR signaling
EGFR downregulation
PI3K events in ERBB2 signaling
EGFR interacts with phospholipase C-gamma
Constitutive Signaling by Aberrant PI3K in Cancer
Constitutive Signaling by EGFRvIII
Inhibition of Signaling by Overexpressed EGFR
RAF/MAP kinase cascade
ERBB2 Regulates Cell Motility
PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling
ERBB2 Activates PTK6 Signaling
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis
Downregulation of ERBB2 signaling
Extra-nuclear estrogen signaling
NOTCH3 Activation and Transmission of Signal to the Nucleus
Estrogen-dependent nuclear events downstream of ESR-membrane signaling
Signaling by ERBB2 KD Mutants
Signaling by ERBB2 ECD mutants
Signaling by ERBB2 TMD/JMD mutants
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
222
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Renal hypomagnesemia 4 Pathogenic rs121434567 RCV000018089
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Benign; Conflicting classifications of pathogenicity rs11569017, rs199756953 RCV005897751
RCV005913907
Cholangiocarcinoma Benign rs7661968, rs4444903, rs11569017 RCV005916668
RCV003311714
RCV005897756
Colorectal cancer Benign rs11569017 RCV005897754
EGF-related disorder Uncertain significance; Likely benign; Conflicting classifications of pathogenicity; Benign rs760127815, rs374675155, rs564898318, rs776112801, rs532628455, rs41468451, rs11569144, rs115396821, rs11568885, rs149396988, rs28592692, rs368476089, rs140682556, rs150311153, rs144628857
View all (6 more)
RCV003407840
RCV003926424
RCV003973591
RCV003397639
RCV003966493
RCV003957799
RCV003972469
RCV003912469
RCV003912468
RCV004754405
RCV003970000
RCV003909280
RCV003978334
RCV004754609
RCV003958393
RCV003913150
RCV003918731
RCV003945865
RCV003945866
RCV003938509
RCV003906263
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Acute Kidney Injury Associate 15798085, 33863396, 37789254
Adenocarcinoma Associate 11741272, 18483390, 19520791, 26625757, 2897079, 32917321, 33974569, 36092955, 36928883, 8648906
Adenocarcinoma of Lung Associate 23028479, 28732076, 30972766, 32720736
Adenocarcinoma of Lung Stimulate 33916908
Adenocarcinoma Scirrhous Associate 7577468
Adenoma Associate 29149105, 35260162
Adenoma Pleomorphic Associate 25230789
Adenomatous Polyposis Coli Associate 7793821
Allergic Fungal Sinusitis Associate 25624129, 26047816, 27393708
Alzheimer Disease Stimulate 19395124