Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
1776
Gene name Gene Name - the full gene name approved by the HGNC.
Deoxyribonuclease 1L3
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
DNASE1L3
Synonyms (NCBI Gene) Gene synonyms aliases
D3, DHP2, DNAS1L3, LSD, SLEB16
Disease Acronyms (UniProt) Disease acronyms from UniProt database
SLEB16
Chromosome Chromosome number
3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
3p14.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the deoxyribonuclease I family. The encoded protein hydrolyzes DNA, is not inhibited by actin, and mediates the breakdown of DNA during apoptosis. Mutations in this gene are a cause of systemic lupus erythematosus-16. Alterna
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs1575496354 A>- Pathogenic Frameshift variant, coding sequence variant
rs1575497576 ->T Pathogenic Frameshift variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT016727 hsa-miR-335-5p Microarray 18185580
MIRT609493 hsa-miR-6801-3p HITS-CLIP 23824327
MIRT609492 hsa-miR-6810-3p HITS-CLIP 23824327
MIRT609491 hsa-miR-6812-3p HITS-CLIP 23824327
MIRT609490 hsa-miR-1236-3p HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000737 Process DNA catabolic process, endonucleolytic IBA 21873635
GO:0002283 Process Neutrophil activation involved in immune response ISS 29191910
GO:0002673 Process Regulation of acute inflammatory response ISS 29191910
GO:0003677 Function DNA binding IBA 21873635
GO:0004530 Function Deoxyribonuclease I activity IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602244 2959 ENSG00000163687
Protein
UniProt ID Q13609
Protein name Deoxyribonuclease gamma (DNase gamma) (EC 3.1.21.-) (DNase I homolog protein DHP2) (Deoxyribonuclease I-like 3) (DNase I-like 3) (Liver and spleen DNase) (LS-DNase) (LSD)
Protein function Has DNA hydrolytic activity. Is capable of both single- and double-stranded DNA cleavage, producing DNA fragments with 3'-OH ends (By similarity). Can cleave chromatin to nucleosomal units and cleaves nucleosomal and liposome-coated DNA (PubMed:
PDB 7KIU
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03372 Exo_endo_phos 24 274 Endonuclease/Exonuclease/phosphatase family Domain
Tissue specificity TISSUE SPECIFICITY: Liver and spleen.
Sequence
Sequence length 305
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Arthritis Arthritis rs1594890601, rs1594882933, rs184370809, rs776489319, rs1594883470
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
Cerebral palsy Cerebral Palsy rs121918149, rs75184679, rs730880264, rs587777428, rs797045067, rs767399782, rs564185858, rs886039513
Colorectal cancer Colorectal Carcinoma rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
Unknown
Disease term Disease name Evidence References Source
Hypocomplementemic Urticarial Vasculitis hypocomplementemic urticarial vasculitis GenCC
Associations from Text Mining
Disease Name Relationship Type References
Arthritis Rheumatoid Associate 33173951
Asthma Stimulate 31903716
Asthma Associate 33035569
Autoimmune Diseases Associate 33173951, 36708011
Behcet Syndrome Associate 33971891
Carcinoma Hepatocellular Associate 31977318, 33744849, 33879119, 34726341, 35035517, 39223584
Carcinoma Hepatocellular Inhibit 35748106
Carcinoma Pancreatic Ductal Inhibit 40065365
Carcinoma Renal Cell Associate 28349958
Colorectal Neoplasms Inhibit 34157681, 37950156