Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	171024
Gene name Gene Name - the full gene name approved by the HGNC.	Synaptopodin 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	SYNPO2
Synonyms (NCBI Gene) Gene synonyms aliases	-
Chromosome Chromosome number	4
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	4q26

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miRTarBase ID	miRNA	Experiments	Reference
MIRT016748	hsa-miR-335-5p	Microarray	18185580
MIRT437627	hsa-miR-150-5p	Microarray, qRT-PCR	22815788
MIRT449307	hsa-miR-144-5p	PAR-CLIP	22100165
MIRT449307	hsa-miR-144-5p	PAR-CLIP	22100165
MIRT756056	hsa-miR-103a-3p	Luciferase reporter assay, Immunoprecipitaion (IP)	35592920
MIRT756057	hsa-miR-22-3p	Luciferase reporter assay, Immunoprecipitaion (IP)	35592920
MIRT756058	hsa-miR-205-5p	Luciferase reporter assay, Immunoprecipitaion (IP)	35592920
MIRT1406531	hsa-miR-103b	CLIP-seq
MIRT1406532	hsa-miR-1179	CLIP-seq
MIRT1406533	hsa-miR-1182	CLIP-seq
MIRT1406534	hsa-miR-1183	CLIP-seq
MIRT1406535	hsa-miR-1207-3p	CLIP-seq
MIRT1406536	hsa-miR-125a-3p	CLIP-seq
MIRT1406537	hsa-miR-1321	CLIP-seq
MIRT1406538	hsa-miR-141	CLIP-seq
MIRT1406539	hsa-miR-146b-3p	CLIP-seq
MIRT1406540	hsa-miR-200a	CLIP-seq
MIRT1406541	hsa-miR-217	CLIP-seq
MIRT1406542	hsa-miR-28-5p	CLIP-seq
MIRT1406543	hsa-miR-3074-5p	CLIP-seq
MIRT1406544	hsa-miR-30a	CLIP-seq
MIRT1406545	hsa-miR-30b	CLIP-seq
MIRT1406546	hsa-miR-30c	CLIP-seq
MIRT1406547	hsa-miR-30d	CLIP-seq
MIRT1406548	hsa-miR-30e	CLIP-seq
MIRT1406549	hsa-miR-3130-3p	CLIP-seq
MIRT1406550	hsa-miR-3139	CLIP-seq
MIRT1406551	hsa-miR-3140-3p	CLIP-seq
MIRT1406552	hsa-miR-3162-5p	CLIP-seq
MIRT1406553	hsa-miR-3173-5p	CLIP-seq
MIRT1406554	hsa-miR-3190	CLIP-seq
MIRT1406555	hsa-miR-365	CLIP-seq
MIRT1406556	hsa-miR-3672	CLIP-seq
MIRT1406557	hsa-miR-3674	CLIP-seq
MIRT1406558	hsa-miR-370	CLIP-seq
MIRT1406559	hsa-miR-376a	CLIP-seq
MIRT1406560	hsa-miR-376b	CLIP-seq
MIRT1406561	hsa-miR-382	CLIP-seq
MIRT1406562	hsa-miR-3923	CLIP-seq
MIRT1406563	hsa-miR-3935	CLIP-seq
MIRT1406564	hsa-miR-3976	CLIP-seq
MIRT1406565	hsa-miR-421	CLIP-seq
MIRT1406566	hsa-miR-4261	CLIP-seq
MIRT1406567	hsa-miR-4272	CLIP-seq
MIRT1406568	hsa-miR-4282	CLIP-seq
MIRT1406569	hsa-miR-433	CLIP-seq
MIRT1406570	hsa-miR-4418	CLIP-seq
MIRT1406571	hsa-miR-4457	CLIP-seq
MIRT1406572	hsa-miR-4461	CLIP-seq
MIRT1406573	hsa-miR-4503	CLIP-seq
MIRT1406574	hsa-miR-4536	CLIP-seq
MIRT1406575	hsa-miR-4640-5p	CLIP-seq
MIRT1406576	hsa-miR-4676-5p	CLIP-seq
MIRT1406577	hsa-miR-4704-5p	CLIP-seq
MIRT1406578	hsa-miR-4709-5p	CLIP-seq
MIRT1406579	hsa-miR-4726-5p	CLIP-seq
MIRT1406580	hsa-miR-4731-3p	CLIP-seq
MIRT1406581	hsa-miR-4731-5p	CLIP-seq
MIRT1406582	hsa-miR-4739	CLIP-seq
MIRT1406583	hsa-miR-4756-5p	CLIP-seq
MIRT1406584	hsa-miR-4763-5p	CLIP-seq
MIRT1406585	hsa-miR-4777-5p	CLIP-seq
MIRT1406586	hsa-miR-4795-3p	CLIP-seq
MIRT1406587	hsa-miR-4801	CLIP-seq
MIRT1406588	hsa-miR-494	CLIP-seq
MIRT1406589	hsa-miR-495	CLIP-seq
MIRT1406590	hsa-miR-509-3-5p	CLIP-seq
MIRT1406591	hsa-miR-509-5p	CLIP-seq
MIRT1406592	hsa-miR-518d-5p	CLIP-seq
MIRT1406593	hsa-miR-519b-5p	CLIP-seq
MIRT1406594	hsa-miR-519c-5p	CLIP-seq
MIRT1406595	hsa-miR-520c-5p	CLIP-seq
MIRT1406596	hsa-miR-526a	CLIP-seq
MIRT1406597	hsa-miR-548c-3p	CLIP-seq
MIRT1406598	hsa-miR-575	CLIP-seq
MIRT1406599	hsa-miR-628-3p	CLIP-seq
MIRT1406600	hsa-miR-656	CLIP-seq
MIRT1406601	hsa-miR-708	CLIP-seq
MIRT1406602	hsa-miR-767-5p	CLIP-seq
MIRT1406603	hsa-miR-874	CLIP-seq
MIRT1406604	hsa-miR-1266	CLIP-seq
MIRT1406605	hsa-miR-1305	CLIP-seq
MIRT1406606	hsa-miR-3127-5p	CLIP-seq
MIRT1406607	hsa-miR-3918	CLIP-seq
MIRT1406608	hsa-miR-4518	CLIP-seq
MIRT1406609	hsa-miR-510	CLIP-seq
MIRT1554378	hsa-miR-1283	CLIP-seq
MIRT1554379	hsa-miR-330-3p	CLIP-seq
MIRT1406558	hsa-miR-370	CLIP-seq
MIRT1554380	hsa-miR-520d-5p	CLIP-seq
MIRT1554381	hsa-miR-524-5p	CLIP-seq
MIRT1406534	hsa-miR-1183	CLIP-seq
MIRT1406604	hsa-miR-1266	CLIP-seq
MIRT2121917	hsa-miR-1270	CLIP-seq
MIRT2121918	hsa-miR-146a	CLIP-seq
MIRT2121919	hsa-miR-146b-5p	CLIP-seq
MIRT2121920	hsa-miR-1910	CLIP-seq
MIRT2121921	hsa-miR-302a	CLIP-seq
MIRT2121922	hsa-miR-302b	CLIP-seq
MIRT2121923	hsa-miR-302c	CLIP-seq
MIRT2121924	hsa-miR-302d	CLIP-seq
MIRT2121925	hsa-miR-302e	CLIP-seq
MIRT2121926	hsa-miR-3124-3p	CLIP-seq
MIRT2121927	hsa-miR-3145-5p	CLIP-seq
MIRT1406554	hsa-miR-3190	CLIP-seq
MIRT2121928	hsa-miR-3662	CLIP-seq
MIRT2121929	hsa-miR-3664-3p	CLIP-seq
MIRT1406558	hsa-miR-370	CLIP-seq
MIRT2121930	hsa-miR-372	CLIP-seq
MIRT2121931	hsa-miR-373	CLIP-seq
MIRT1406564	hsa-miR-3976	CLIP-seq
MIRT1406566	hsa-miR-4261	CLIP-seq
MIRT2121932	hsa-miR-4274	CLIP-seq
MIRT2121933	hsa-miR-4330	CLIP-seq
MIRT2121934	hsa-miR-4428	CLIP-seq
MIRT2121935	hsa-miR-4434	CLIP-seq
MIRT2121936	hsa-miR-4494	CLIP-seq
MIRT2121937	hsa-miR-4516	CLIP-seq
MIRT1406608	hsa-miR-4518	CLIP-seq
MIRT2121938	hsa-miR-4531	CLIP-seq
MIRT1406574	hsa-miR-4536	CLIP-seq
MIRT2121939	hsa-miR-4645-3p	CLIP-seq
MIRT2121940	hsa-miR-4760-3p	CLIP-seq
MIRT2121941	hsa-miR-499a-5p	CLIP-seq
MIRT2121942	hsa-miR-520a-3p	CLIP-seq
MIRT2121943	hsa-miR-520b	CLIP-seq
MIRT2121944	hsa-miR-520c-3p	CLIP-seq
MIRT2121945	hsa-miR-520d-3p	CLIP-seq
MIRT2121946	hsa-miR-520e	CLIP-seq
MIRT2121947	hsa-miR-600	CLIP-seq
MIRT2121948	hsa-miR-620	CLIP-seq
MIRT2121949	hsa-miR-624	CLIP-seq
MIRT1406534	hsa-miR-1183	CLIP-seq
MIRT2343852	hsa-miR-2113	CLIP-seq
MIRT2343853	hsa-miR-3671	CLIP-seq
MIRT1406558	hsa-miR-370	CLIP-seq
MIRT2343854	hsa-miR-550a	CLIP-seq
MIRT2395466	hsa-miR-1290	CLIP-seq
MIRT2395467	hsa-miR-4256	CLIP-seq
MIRT2395468	hsa-miR-622	CLIP-seq
MIRT2433765	hsa-miR-577	CLIP-seq
MIRT2460973	hsa-miR-1206	CLIP-seq
MIRT2460974	hsa-miR-1273e	CLIP-seq
MIRT2460975	hsa-miR-1827	CLIP-seq
MIRT2460976	hsa-miR-2964a-3p	CLIP-seq
MIRT2460977	hsa-miR-302f	CLIP-seq
MIRT2460978	hsa-miR-3122	CLIP-seq
MIRT2460979	hsa-miR-3197	CLIP-seq
MIRT2121929	hsa-miR-3664-3p	CLIP-seq
MIRT2460980	hsa-miR-3689a-3p	CLIP-seq
MIRT2460981	hsa-miR-3689c	CLIP-seq
MIRT2460982	hsa-miR-3913-5p	CLIP-seq
MIRT2460983	hsa-miR-3929	CLIP-seq
MIRT2460984	hsa-miR-4419b	CLIP-seq
MIRT2460985	hsa-miR-4433	CLIP-seq
MIRT2460986	hsa-miR-4459	CLIP-seq
MIRT2460987	hsa-miR-4478	CLIP-seq
MIRT2460988	hsa-miR-4649-3p	CLIP-seq
MIRT2460989	hsa-miR-4695-5p	CLIP-seq
MIRT2460990	hsa-miR-4722-5p	CLIP-seq
MIRT2460991	hsa-miR-4728-5p	CLIP-seq
MIRT2460992	hsa-miR-4768-3p	CLIP-seq
MIRT2460993	hsa-miR-485-5p	CLIP-seq
MIRT1406609	hsa-miR-510	CLIP-seq
MIRT2460994	hsa-miR-512-5p	CLIP-seq
MIRT2460995	hsa-miR-940	CLIP-seq
MIRT2460978	hsa-miR-3122	CLIP-seq
MIRT2460979	hsa-miR-3197	CLIP-seq
MIRT2460980	hsa-miR-3689a-3p	CLIP-seq
MIRT2460981	hsa-miR-3689c	CLIP-seq
MIRT2460982	hsa-miR-3913-5p	CLIP-seq
MIRT2460983	hsa-miR-3929	CLIP-seq
MIRT2460984	hsa-miR-4419b	CLIP-seq
MIRT2460987	hsa-miR-4478	CLIP-seq
MIRT2460988	hsa-miR-4649-3p	CLIP-seq
MIRT2460991	hsa-miR-4728-5p	CLIP-seq
MIRT2460993	hsa-miR-485-5p	CLIP-seq
MIRT1406535	hsa-miR-1207-3p	CLIP-seq
MIRT2637533	hsa-miR-3189-3p	CLIP-seq
MIRT2637534	hsa-miR-4766-5p	CLIP-seq
MIRT2637535	hsa-miR-711	CLIP-seq
MIRT2637536	hsa-miR-105	CLIP-seq
MIRT2460973	hsa-miR-1206	CLIP-seq
MIRT2460974	hsa-miR-1273e	CLIP-seq
MIRT1554378	hsa-miR-1283	CLIP-seq
MIRT1406605	hsa-miR-1305	CLIP-seq
MIRT2460975	hsa-miR-1827	CLIP-seq
MIRT2637537	hsa-miR-2054	CLIP-seq
MIRT2637538	hsa-miR-216a	CLIP-seq
MIRT2637539	hsa-miR-2276	CLIP-seq
MIRT2637540	hsa-miR-23a	CLIP-seq
MIRT2637541	hsa-miR-23b	CLIP-seq
MIRT2637542	hsa-miR-23c	CLIP-seq
MIRT2637543	hsa-miR-2909	CLIP-seq
MIRT2460976	hsa-miR-2964a-3p	CLIP-seq
MIRT2460977	hsa-miR-302f	CLIP-seq
MIRT2637544	hsa-miR-3117-5p	CLIP-seq
MIRT2637545	hsa-miR-3119	CLIP-seq
MIRT2460978	hsa-miR-3122	CLIP-seq
MIRT2637546	hsa-miR-3123	CLIP-seq
MIRT2637547	hsa-miR-3145-3p	CLIP-seq
MIRT2637548	hsa-miR-3161	CLIP-seq
MIRT1406552	hsa-miR-3162-5p	CLIP-seq
MIRT2460979	hsa-miR-3197	CLIP-seq
MIRT1554379	hsa-miR-330-3p	CLIP-seq
MIRT2637549	hsa-miR-337-5p	CLIP-seq
MIRT2637550	hsa-miR-338-5p	CLIP-seq
MIRT2637551	hsa-miR-3607-5p	CLIP-seq
MIRT2637552	hsa-miR-3613-3p	CLIP-seq
MIRT2637553	hsa-miR-3622b-5p	CLIP-seq
MIRT2637554	hsa-miR-3658	CLIP-seq
MIRT2121929	hsa-miR-3664-3p	CLIP-seq
MIRT2637555	hsa-miR-3667-3p	CLIP-seq
MIRT2460980	hsa-miR-3689a-3p	CLIP-seq
MIRT2460981	hsa-miR-3689c	CLIP-seq
MIRT2637556	hsa-miR-371-5p	CLIP-seq
MIRT2637557	hsa-miR-371b-5p	CLIP-seq
MIRT2460982	hsa-miR-3913-5p	CLIP-seq
MIRT2637558	hsa-miR-3924	CLIP-seq
MIRT2460983	hsa-miR-3929	CLIP-seq
MIRT2637559	hsa-miR-3973	CLIP-seq
MIRT2637560	hsa-miR-3978	CLIP-seq
MIRT2637561	hsa-miR-410	CLIP-seq
MIRT2637562	hsa-miR-412	CLIP-seq
MIRT2121933	hsa-miR-4330	CLIP-seq
MIRT2460984	hsa-miR-4419b	CLIP-seq
MIRT2460985	hsa-miR-4433	CLIP-seq
MIRT2460986	hsa-miR-4459	CLIP-seq
MIRT2460987	hsa-miR-4478	CLIP-seq
MIRT1406574	hsa-miR-4536	CLIP-seq
MIRT2637563	hsa-miR-4637	CLIP-seq
MIRT2637564	hsa-miR-4643	CLIP-seq
MIRT2460988	hsa-miR-4649-3p	CLIP-seq
MIRT2637565	hsa-miR-466	CLIP-seq
MIRT2637566	hsa-miR-4662a-3p	CLIP-seq
MIRT2637567	hsa-miR-4684-5p	CLIP-seq
MIRT2637568	hsa-miR-4686	CLIP-seq
MIRT2460989	hsa-miR-4695-5p	CLIP-seq
MIRT2637569	hsa-miR-4698	CLIP-seq
MIRT2637570	hsa-miR-4711-5p	CLIP-seq
MIRT2637571	hsa-miR-4712-3p	CLIP-seq
MIRT2460990	hsa-miR-4722-5p	CLIP-seq
MIRT2460991	hsa-miR-4728-5p	CLIP-seq
MIRT2637572	hsa-miR-4747-5p	CLIP-seq
MIRT2637573	hsa-miR-4753-3p	CLIP-seq
MIRT2460992	hsa-miR-4768-3p	CLIP-seq
MIRT2637574	hsa-miR-4772-3p	CLIP-seq
MIRT2637575	hsa-miR-4789-3p	CLIP-seq
MIRT2637576	hsa-miR-4799-5p	CLIP-seq
MIRT2637577	hsa-miR-4803	CLIP-seq
MIRT2637578	hsa-miR-483-3p	CLIP-seq
MIRT2460993	hsa-miR-485-5p	CLIP-seq
MIRT1406589	hsa-miR-495	CLIP-seq
MIRT2637579	hsa-miR-499-3p	CLIP-seq
MIRT2637580	hsa-miR-499a-3p	CLIP-seq
MIRT1406609	hsa-miR-510	CLIP-seq
MIRT2460994	hsa-miR-512-5p	CLIP-seq
MIRT2637581	hsa-miR-513a-5p	CLIP-seq
MIRT2637582	hsa-miR-518a-5p	CLIP-seq
MIRT2637583	hsa-miR-527	CLIP-seq
MIRT2637584	hsa-miR-548a-3p	CLIP-seq
MIRT2637585	hsa-miR-548e	CLIP-seq
MIRT2637586	hsa-miR-548f	CLIP-seq
MIRT2637587	hsa-miR-548l	CLIP-seq
MIRT2637588	hsa-miR-548p	CLIP-seq
MIRT2637589	hsa-miR-556-5p	CLIP-seq
MIRT2637590	hsa-miR-605	CLIP-seq
MIRT2637591	hsa-miR-607	CLIP-seq
MIRT1406600	hsa-miR-656	CLIP-seq
MIRT2637592	hsa-miR-665	CLIP-seq
MIRT2637593	hsa-miR-888	CLIP-seq
MIRT2460995	hsa-miR-940	CLIP-seq
MIRT2637594	hsa-miR-942	CLIP-seq
MIRT2637536	hsa-miR-105	CLIP-seq
MIRT2460973	hsa-miR-1206	CLIP-seq
MIRT2460974	hsa-miR-1273e	CLIP-seq
MIRT1554378	hsa-miR-1283	CLIP-seq
MIRT1406605	hsa-miR-1305	CLIP-seq
MIRT2121918	hsa-miR-146a	CLIP-seq
MIRT2121919	hsa-miR-146b-5p	CLIP-seq
MIRT2460975	hsa-miR-1827	CLIP-seq
MIRT2637537	hsa-miR-2054	CLIP-seq
MIRT2637538	hsa-miR-216a	CLIP-seq
MIRT2637539	hsa-miR-2276	CLIP-seq
MIRT2637540	hsa-miR-23a	CLIP-seq
MIRT2637541	hsa-miR-23b	CLIP-seq
MIRT2637542	hsa-miR-23c	CLIP-seq
MIRT2637543	hsa-miR-2909	CLIP-seq
MIRT2460976	hsa-miR-2964a-3p	CLIP-seq
MIRT2460977	hsa-miR-302f	CLIP-seq
MIRT2637544	hsa-miR-3117-5p	CLIP-seq
MIRT2637545	hsa-miR-3119	CLIP-seq
MIRT2460978	hsa-miR-3122	CLIP-seq
MIRT2637546	hsa-miR-3123	CLIP-seq
MIRT2637547	hsa-miR-3145-3p	CLIP-seq
MIRT2637548	hsa-miR-3161	CLIP-seq
MIRT1406552	hsa-miR-3162-5p	CLIP-seq
MIRT2692491	hsa-miR-3174	CLIP-seq
MIRT2460979	hsa-miR-3197	CLIP-seq
MIRT1554379	hsa-miR-330-3p	CLIP-seq
MIRT2637549	hsa-miR-337-5p	CLIP-seq
MIRT2637550	hsa-miR-338-5p	CLIP-seq
MIRT2692492	hsa-miR-3591-5p	CLIP-seq
MIRT2692493	hsa-miR-3606	CLIP-seq
MIRT2637551	hsa-miR-3607-5p	CLIP-seq
MIRT2637552	hsa-miR-3613-3p	CLIP-seq
MIRT2637553	hsa-miR-3622b-5p	CLIP-seq
MIRT2637554	hsa-miR-3658	CLIP-seq
MIRT2121929	hsa-miR-3664-3p	CLIP-seq
MIRT2637555	hsa-miR-3667-3p	CLIP-seq
MIRT2460980	hsa-miR-3689a-3p	CLIP-seq
MIRT2460981	hsa-miR-3689c	CLIP-seq
MIRT2637556	hsa-miR-371-5p	CLIP-seq
MIRT2637557	hsa-miR-371b-5p	CLIP-seq
MIRT2460982	hsa-miR-3913-5p	CLIP-seq
MIRT2637558	hsa-miR-3924	CLIP-seq
MIRT2460983	hsa-miR-3929	CLIP-seq
MIRT2637559	hsa-miR-3973	CLIP-seq
MIRT2637560	hsa-miR-3978	CLIP-seq
MIRT2637561	hsa-miR-410	CLIP-seq
MIRT2637562	hsa-miR-412	CLIP-seq
MIRT2121933	hsa-miR-4330	CLIP-seq
MIRT2460984	hsa-miR-4419b	CLIP-seq
MIRT2460985	hsa-miR-4433	CLIP-seq
MIRT2460986	hsa-miR-4459	CLIP-seq
MIRT2460987	hsa-miR-4478	CLIP-seq
MIRT1406574	hsa-miR-4536	CLIP-seq
MIRT2637563	hsa-miR-4637	CLIP-seq
MIRT2637564	hsa-miR-4643	CLIP-seq
MIRT2460988	hsa-miR-4649-3p	CLIP-seq
MIRT2637565	hsa-miR-466	CLIP-seq
MIRT2637566	hsa-miR-4662a-3p	CLIP-seq
MIRT2637567	hsa-miR-4684-5p	CLIP-seq
MIRT2637568	hsa-miR-4686	CLIP-seq
MIRT2460989	hsa-miR-4695-5p	CLIP-seq
MIRT2637569	hsa-miR-4698	CLIP-seq
MIRT2637570	hsa-miR-4711-5p	CLIP-seq
MIRT2637571	hsa-miR-4712-3p	CLIP-seq
MIRT2460990	hsa-miR-4722-5p	CLIP-seq
MIRT2460991	hsa-miR-4728-5p	CLIP-seq
MIRT2637572	hsa-miR-4747-5p	CLIP-seq
MIRT2637573	hsa-miR-4753-3p	CLIP-seq
MIRT2460992	hsa-miR-4768-3p	CLIP-seq
MIRT2637574	hsa-miR-4772-3p	CLIP-seq
MIRT2637575	hsa-miR-4789-3p	CLIP-seq
MIRT1406586	hsa-miR-4795-3p	CLIP-seq
MIRT2637576	hsa-miR-4799-5p	CLIP-seq
MIRT2637577	hsa-miR-4803	CLIP-seq
MIRT2637578	hsa-miR-483-3p	CLIP-seq
MIRT2460993	hsa-miR-485-5p	CLIP-seq
MIRT1406589	hsa-miR-495	CLIP-seq
MIRT2637579	hsa-miR-499-3p	CLIP-seq
MIRT2637580	hsa-miR-499a-3p	CLIP-seq
MIRT1406609	hsa-miR-510	CLIP-seq
MIRT2460994	hsa-miR-512-5p	CLIP-seq
MIRT2637581	hsa-miR-513a-5p	CLIP-seq
MIRT2637582	hsa-miR-518a-5p	CLIP-seq
MIRT2637583	hsa-miR-527	CLIP-seq
MIRT2637584	hsa-miR-548a-3p	CLIP-seq
MIRT1406597	hsa-miR-548c-3p	CLIP-seq
MIRT2637585	hsa-miR-548e	CLIP-seq
MIRT2637586	hsa-miR-548f	CLIP-seq
MIRT2637587	hsa-miR-548l	CLIP-seq
MIRT2637588	hsa-miR-548p	CLIP-seq
MIRT2637589	hsa-miR-556-5p	CLIP-seq
MIRT2692494	hsa-miR-589	CLIP-seq
MIRT2637590	hsa-miR-605	CLIP-seq
MIRT2637591	hsa-miR-607	CLIP-seq
MIRT1406600	hsa-miR-656	CLIP-seq
MIRT2637593	hsa-miR-888	CLIP-seq
MIRT2692495	hsa-miR-921	CLIP-seq
MIRT2460995	hsa-miR-940	CLIP-seq
MIRT2637594	hsa-miR-942	CLIP-seq

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GO ID	Ontology	Definition	Evidence	Reference
GO:0001725	Component	Stress fiber	IBA
GO:0001725	Component	Stress fiber	IDA	20554076, 23434281
GO:0003779	Function	Actin binding	IBA
GO:0003779	Function	Actin binding	IEA
GO:0005515	Function	Protein binding	IPI	21643011, 23434281
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0005634	Component	Nucleus	ISS
GO:0005654	Component	Nucleoplasm	IDA
GO:0005737	Component	Cytoplasm	IEA
GO:0005829	Component	Cytosol	IDA
GO:0005856	Component	Cytoskeleton	IEA
GO:0005925	Component	Focal adhesion	HDA	21423176
GO:0005925	Component	Focal adhesion	IDA	20554076
GO:0005925	Component	Focal adhesion	IEA
GO:0015629	Component	Actin cytoskeleton	IBA
GO:0015629	Component	Actin cytoskeleton	IDA
GO:0030018	Component	Z disc	IBA
GO:0030018	Component	Z disc	IDA	20554076
GO:0030018	Component	Z disc	IEA
GO:0030018	Component	Z disc	ISS
GO:0030335	Process	Positive regulation of cell migration	IDA	22915763, 24005909
GO:0031005	Function	Filamin binding	IDA	20554076
GO:0032233	Process	Positive regulation of actin filament bundle assembly	IBA
GO:0032233	Process	Positive regulation of actin filament bundle assembly	IDA	24005909
GO:0051371	Function	Muscle alpha-actinin binding	ISS
GO:0051393	Function	Alpha-actinin binding	IDA	20554076
GO:0070161	Component	Anchoring junction	IEA
GO:0071889	Function	14-3-3 protein binding	ISS
GO:2000298	Process	Regulation of Rho-dependent protein serine/threonine kinase activity	IDA	22915763

MIM	HGNC	e!Ensembl
620941	17732	ENSG00000172403

Protein

UniProt ID

Q9UMS6

Protein name

Synaptopodin-2 (Genethonin-2) (Myopodin)

Protein function

Has an actin-binding and actin-bundling activity. Can induce the formation of F-actin networks in an isoform-specific manner (PubMed:23225103, PubMed:24005909). At the sarcomeric Z lines is proposed to act as adapter protein that links nascent m

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00595	PDZ	7 → 85	PDZ domain	Domain

Tissue specificity

TISSUE SPECIFICITY: Expressed in heart muscle. Isoform 5 is specifically expressed in skeletal muscle. {ECO:0000269|PubMed:11297942, ECO:0000269|PubMed:20554076}.

Sequence

MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRNQSKASGSGLCEGDEVVSINGNP
CADLTYPEVIKLMESITDSLQMLIKRPSSGISEALISENENKNLEHLTHGGYVESTTLQI
RPATKTQCTEFFLAPVKTEVPLAENQRSGPDCAGSLKEETGPSYQRAPQMPDSQRGRVAE
ELILREKVEAVQPGPVVELQLSLSQERHKGASGPLVALPGAEKSKSPDPDPNLSHDRIVH
INSIPTNEKADPFLRSSKIIQISSGRELRVIQESEAGDAGLPRVEVILDCSDRQKTEGCR
LQAGKECVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRSEKDHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELERE
ADEEEEGDKEDTCEVAFLGASESEVDEELLSDVDDNTQVVNFDWDSGLVDIEKKLNRGDK
MEMLPDTTGKGALMFAKRRERMDQITAQKEEDKVGGTPSREQDAAQTDGLRTTTSYQRKE
EESVRTQSSVSKSYIEVSHGLGHVPQQNGFSGTSETANIQRMVPMNRTAKPFPGSVNQPA
TPFSPTRNMTSPIADFPAPPPYSAVTPPPDAFSRGVSSPIAGPAQPPPWPQPAPWSQPAF
YDSSERIASRDERISVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGK
RGTGAGGDSGPEEDYLSLGAEACNFMQSSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVW
SPGVAPTQPPAFPTSNPSKGTVVSSIKIAQPSYPPARPASTLNVAGPFKGPQAAVASQNY
TPKPTVSTPTVNAVQPGAVGPSNELPGMSGRGAQLFAKRQSRMEKYVVDSDTVQAHAARA
QSPTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPLAALKSQPSAAQPSKMGKKKGKKPLN
ALDVMKHQPYQLNASLFTFQPPDAKDGLPQKSSVKVNSALAMKQALPPRPVNAASPTNVQ
ASSVYSVPAYTSPPSFFAEASSPVSASPVPVGIPTSPKQESASSSYFVAPRPKFSAKKSG
VTIQVWKPSVVEE

Sequence length

1093

Interactions

View interactions

	KEGG
	Cytoskeleton in muscle cells

Show/Hide Unknown Diseases (2)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Breast Cancer	Acute radiotoxicity in breast cancer	N/A	N/A	GWAS
Ovarian cancer	Epithelial ovarian cancer	N/A	N/A	GWAS

Show/Hide Text Mining Associations (22)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Carcinogenesis	Associate	19360353
Carcinoma Ovarian Epithelial	Associate	28231729
Colorectal Neoplasms	Associate	22252522
Death	Associate	27592258
Inflammation	Associate	37605453
Kidney Neoplasms	Associate	27592258
Lung Neoplasms	Associate	30177858
Muscular Atrophy	Associate	38201288
Myopathies Nemaline	Associate	38201288
Nasopharyngeal Carcinoma	Associate	37505159
Neoplasm Metastasis	Associate	27592258, 37505159, 38201288
Neoplasms	Associate	19360353, 37605453, 38201288
Neoplasms	Inhibit	21643011, 22252522, 27592258
Neoplasms Squamous Cell	Associate	35327656
Peritonitis	Associate	37605453
Prostatic Neoplasms	Inhibit	11696420
Prostatic Neoplasms	Associate	19360353, 21643011
Prostatitis	Inhibit	21643011
Squamous Cell Carcinoma of Head and Neck	Associate	35327656
Stomach Neoplasms	Associate	37605453
Triple Negative Breast Neoplasms	Associate	31817810
Urinary Bladder Neoplasms	Associate	27592258

SYNPO2 (synaptopodin 2)