SSBP4 (single stranded DNA binding protein 4)

Gene

• Entrez ID: 170463
• Gene name: Single stranded DNA binding protein 4
• Gene symbol: SSBP4
• Synonyms (NCBI Gene): -
• Chromosome: 19
• Chromosome location: 19p13.11

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT563720	hsa-miR-3662	PAR-CLIP	20371350
MIRT081449	hsa-miR-224-3p	PAR-CLIP	20371350
MIRT081452	hsa-miR-522-3p	PAR-CLIP	20371350
MIRT081458	hsa-miR-5007-5p	PAR-CLIP	20371350
MIRT081456	hsa-miR-3163	PAR-CLIP	20371350
MIRT563719	hsa-miR-6841-3p	PAR-CLIP	20371350
MIRT563718	hsa-miR-1915-5p	PAR-CLIP	20371350
MIRT081453	hsa-miR-924	PAR-CLIP	20371350
MIRT406581	hsa-miR-6854-3p	PAR-CLIP	20371350
MIRT081461	hsa-miR-6830-3p	PAR-CLIP	20371350
MIRT563717	hsa-miR-502-5p	PAR-CLIP	20371350
MIRT563720	hsa-miR-3662	PAR-CLIP	20371350
MIRT081449	hsa-miR-224-3p	PAR-CLIP	20371350
MIRT081452	hsa-miR-522-3p	PAR-CLIP	20371350
MIRT081458	hsa-miR-5007-5p	PAR-CLIP	20371350
MIRT081456	hsa-miR-3163	PAR-CLIP	20371350
MIRT563719	hsa-miR-6841-3p	PAR-CLIP	20371350
MIRT563718	hsa-miR-1915-5p	PAR-CLIP	20371350
MIRT081453	hsa-miR-924	PAR-CLIP	20371350
MIRT406581	hsa-miR-6854-3p	PAR-CLIP	20371350
MIRT081461	hsa-miR-6830-3p	PAR-CLIP	20371350
MIRT563717	hsa-miR-502-5p	PAR-CLIP	20371350
MIRT1391661	hsa-miR-1207-3p	CLIP-seq
MIRT1391662	hsa-miR-1285	CLIP-seq
MIRT1391663	hsa-miR-296-5p	CLIP-seq
MIRT1391664	hsa-miR-3115	CLIP-seq
MIRT1391665	hsa-miR-3151	CLIP-seq
MIRT1391666	hsa-miR-3187-5p	CLIP-seq
MIRT1391667	hsa-miR-4447	CLIP-seq
MIRT1391668	hsa-miR-4472	CLIP-seq
MIRT1391669	hsa-miR-4640-3p	CLIP-seq
MIRT1391670	hsa-miR-4729	CLIP-seq
MIRT1391671	hsa-miR-4732-3p	CLIP-seq
MIRT1391672	hsa-miR-4758-3p	CLIP-seq
MIRT1391673	hsa-miR-491-5p	CLIP-seq
MIRT1391674	hsa-miR-612	CLIP-seq
MIRT2117293	hsa-miR-2115	CLIP-seq
MIRT1391664	hsa-miR-3115	CLIP-seq
MIRT1391670	hsa-miR-4729	CLIP-seq
MIRT2117294	hsa-miR-548aa	CLIP-seq
MIRT2117295	hsa-miR-548ac	CLIP-seq
MIRT2117296	hsa-miR-548d-3p	CLIP-seq
MIRT2117297	hsa-miR-548z	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0003677	Function	DNA binding	IEA
GO:0003697	Function	Single-stranded DNA binding	IEA
GO:0005515	Function	Protein binding	IPI	16189514, 20211142, 21516116, 28514442, 32296183, 33961781
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IBA

Other IDs

• MIM: 607391
• HGNC: 15676
• e!Ensembl: ENSG00000130511

Protein

• UniProt ID: Q9BWG4
• Protein name: Single-stranded DNA-binding protein 4
• PDB: 7OBX, 7OBY
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF04503	SSDP	82 → 360		Family

• Sequence:

  MYAKGGKGSAVPSDSQAREKLALYVYEYLLHIGAQKSAQTFLSEIRWEKNITLGEPPGFL
  HSWWCVFWDLYCAAPDRREACEHSGEAKAFQDYSAAAAPSPVMGSMAPGDTMAAGSMAAG
  FFQGPPGSQPSPHNPNAPMMGPHGQPFMSPRFPGGPRPTLRMPSQPPAGLPGSQPLLPGA
  MEPSPRAQGHPSMGGPMQRVTPPRGMASVGPQSYGGGMRPPPNSLAGPGLPAMNMGPGVR
  GPWASPSGNSIPYSSSSPGSYTGPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGQGA
  GRANFPLGPGPEGPMAAMSAMEPHHVNGSLGSGDMDGLPKSSPGAVAGLSNAPGTPRDDG
  EMAAAGTFLHPFPSESYSPGMTMSV

• Sequence length: 385

Associated diseases

Unknown
Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Sarcoma	Uncertain significance	rs535525251	RCV005930693

Associations from Text Mining
Disease Name	Relationship Type	References
Breast Neoplasms	Associate	29727689
Stress Disorders Post Traumatic	Associate	35836289