Gene Gene information from NCBI Gene database.
Entrez ID 1634
Gene name Decorin
Gene symbol DCN
Synonyms (NCBI Gene)
CSCDDSPG2PG40PGIIPGS2SLRR1B
Chromosome 12
Chromosome location 12q21.33
Summary This gene encodes a member of the small leucine-rich proteoglycan family of proteins. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed to generate the mature prot
SNPs SNP information provided by dbSNP.
4
SNP ID Visualize variation Clinical significance Consequence
rs80338741 A>- Pathogenic Frameshift variant, coding sequence variant, 3 prime UTR variant
rs80338742 G>- Pathogenic Frameshift variant, coding sequence variant, 3 prime UTR variant
rs397515545 C>- Pathogenic Frameshift variant, coding sequence variant, 3 prime UTR variant
rs587777258 T>- Pathogenic Coding sequence variant, frameshift variant, 3 prime UTR variant
miRNA miRNA information provided by mirtarbase database.
310
miRTarBase ID miRNA Experiments Reference
MIRT926407 hsa-miR-3647-3p CLIP-seq
MIRT926408 hsa-miR-4766-5p CLIP-seq
MIRT926409 hsa-miR-4282 CLIP-seq
MIRT926410 hsa-miR-4698 CLIP-seq
MIRT926411 hsa-miR-548c-3p CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
JUN Repression 8798756
NR1H4 Activation 18514055
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
27
GO ID Ontology Definition Evidence Reference
GO:0003723 Function RNA binding HDA 22658674
GO:0005515 Function Protein binding IPI 1747115, 11598131, 20026052, 25331875, 25789606
GO:0005539 Function Glycosaminoglycan binding IEA
GO:0005576 Component Extracellular region HDA 27068509
GO:0005576 Component Extracellular region IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
125255 2705 ENSG00000011465
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P07585
Protein name Decorin (Bone proteoglycan II) (PG-S2) (PG40)
Protein function May affect the rate of fibrils formation.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01462 LRRNT 53 80 Leucine rich repeat N-terminal domain Family
PF13855 LRR_8 81 141 Leucine rich repeat Repeat
PF13855 LRR_8 150 218 Leucine rich repeat Repeat
PF13855 LRR_8 221 281 Leucine rich repeat Repeat
Tissue specificity TISSUE SPECIFICITY: Detected in placenta (at protein level) (PubMed:32337544). Detected in cerebrospinal fluid, fibroblasts and urine (at protein level) (PubMed:25326458, PubMed:36213313, PubMed:37453717). {ECO:0000269|PubMed:25326458, ECO:0000269|PubMed:
Sequence
Sequence length 359
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  TGF-beta signaling pathway
Cytoskeleton in muscle cells
Proteoglycans in cancer
  Degradation of the extracellular matrix
A tetrasaccharide linker sequence is required for GAG synthesis
Chondroitin sulfate biosynthesis
Dermatan sulfate biosynthesis
CS/DS degradation
ECM proteoglycans
Defective B4GALT7 causes EDS, progeroid type
Defective B3GAT3 causes JDSSDHD
Defective CHST3 causes SEDCJD
Defective CHST14 causes EDS, musculocontractural type
Defective CHSY1 causes TPBS
Defective B3GALT6 causes EDSP2 and SEMDJL1
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
49
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Congenital stromal corneal dystrophy Pathogenic rs587777258, rs80338741, rs80338742, rs397515545 RCV000114315
RCV000018366
RCV000020465
RCV000055876
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
DCN-related disorder Likely benign; Benign rs758251041, rs191218249, rs142752401 RCV003964220
RCV003957612
RCV003910151
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Achondrogenesis type 2 Associate 11570921
Adenocarcinoma of Lung Inhibit 30604627, 30840274
Adenocarcinoma of Lung Associate 32519739
Adenoma Associate 30175151
Alopecia Areata Associate 36809409
Astrocytoma Associate 19320777
Ataxia Telangiectasia Associate 30679601
Atherosclerosis Associate 38256024
Brain Neoplasms Inhibit 33878734
Breast Neoplasms Associate 18293176, 19036156, 22363530, 23007289, 23350987, 24403067, 25400079, 32406376, 34055036