Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
1634
Gene name Gene Name - the full gene name approved by the HGNC.
Decorin
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
DCN
Synonyms (NCBI Gene) Gene synonyms aliases
CSCD, DSPG2, PG40, PGII, PGS2, SLRR1B
Disease Acronyms (UniProt) Disease acronyms from UniProt database
CSCD
Chromosome Chromosome number
12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12q21.33
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the small leucine-rich proteoglycan family of proteins. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed to generate the mature prot
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs80338741 A>- Pathogenic Frameshift variant, coding sequence variant, 3 prime UTR variant
rs80338742 G>- Pathogenic Frameshift variant, coding sequence variant, 3 prime UTR variant
rs397515545 C>- Pathogenic Frameshift variant, coding sequence variant, 3 prime UTR variant
rs587777258 T>- Pathogenic Coding sequence variant, frameshift variant, 3 prime UTR variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT926407 hsa-miR-3647-3p CLIP-seq
MIRT926408 hsa-miR-4766-5p CLIP-seq
MIRT926409 hsa-miR-4282 CLIP-seq
MIRT926410 hsa-miR-4698 CLIP-seq
MIRT926411 hsa-miR-548c-3p CLIP-seq
Transcription factors
Transcription factor Regulation Reference
JUN Repression 8798756
NR1H4 Activation 18514055
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001822 Process Kidney development IEA
GO:0001890 Process Placenta development IEA
GO:0003723 Function RNA binding HDA 22658674
GO:0005515 Function Protein binding IPI 1747115, 11598131, 20026052, 25331875, 25789606
GO:0005518 Function Collagen binding IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
125255 2705 ENSG00000011465
Protein
UniProt ID P07585
Protein name Decorin (Bone proteoglycan II) (PG-S2) (PG40)
Protein function May affect the rate of fibrils formation.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01462 LRRNT 53 80 Leucine rich repeat N-terminal domain Family
PF13855 LRR_8 81 141 Leucine rich repeat Repeat
PF13855 LRR_8 150 218 Leucine rich repeat Repeat
PF13855 LRR_8 221 281 Leucine rich repeat Repeat
Tissue specificity TISSUE SPECIFICITY: Detected in placenta (at protein level) (PubMed:32337544). Detected in cerebrospinal fluid, fibroblasts and urine (at protein level) (PubMed:25326458, PubMed:36213313, PubMed:37453717). {ECO:0000269|PubMed:25326458, ECO:0000269|PubMed:
Sequence
Sequence length 359
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  TGF-beta signaling pathway
Cytoskeleton in muscle cells
Proteoglycans in cancer
  Degradation of the extracellular matrix
A tetrasaccharide linker sequence is required for GAG synthesis
Chondroitin sulfate biosynthesis
Dermatan sulfate biosynthesis
CS/DS degradation
ECM proteoglycans
Defective B4GALT7 causes EDS, progeroid type
Defective B3GAT3 causes JDSSDHD
Defective CHST3 causes SEDCJD
Defective CHST14 causes EDS, musculocontractural type
Defective CHSY1 causes TPBS
Defective B3GALT6 causes EDSP2 and SEMDJL1
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Congenital stromal corneal dystrophy Congenital stromal corneal dystrophy rs80338741, rs80338742, rs397515545, rs587777258
Endometrial carcinoma Endometrial Carcinoma rs34612342, rs587776667, rs587776701, rs63750955, rs587776706, rs121434629, rs80359605, rs121913530, rs104894365, rs79184941, rs121913478, rs63750781, rs193922343, rs267608094, rs267608077
View all (247 more)
16804899
Facioscapulohumeral muscular dystrophy Muscular Dystrophy, Facioscapulohumeral rs387907319, rs397514623, rs1057519614, rs1598416221, rs886041918, rs886042417, rs1057519644, rs1245372794, rs1555642277, rs1555644339, rs1555647265, rs886044369, rs1568350731, rs377471712, rs2075161300
View all (2 more)
12868502
Unknown
Disease term Disease name Evidence References Source
Cirrhosis Cirrhosis 16005714 ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Achondrogenesis type 2 Associate 11570921
Adenocarcinoma of Lung Inhibit 30604627, 30840274
Adenocarcinoma of Lung Associate 32519739
Adenoma Associate 30175151
Alopecia Areata Associate 36809409
Astrocytoma Associate 19320777
Ataxia Telangiectasia Associate 30679601
Atherosclerosis Associate 38256024
Brain Neoplasms Inhibit 33878734
Breast Neoplasms Associate 18293176, 19036156, 22363530, 23007289, 23350987, 24403067, 25400079, 32406376, 34055036