Gene Gene information from NCBI Gene database.
Entrez ID 157570
Gene name Establishment of sister chromatid cohesion N-acetyltransferase 2
Gene symbol ESCO2
Synonyms (NCBI Gene)
2410004I17RikEFO2EFO2pJHSRBShEFO2
Chromosome 8
Chromosome location 8p21.1
Summary This gene encodes a protein that may have acetyltransferase activity and may be required for the establishment of sister chromatid cohesion during the S phase of mitosis. Mutations in this gene have been associated with Roberts syndrome. [provided by RefS
SNPs SNP information provided by dbSNP.
33
SNP ID Visualize variation Clinical significance Consequence
rs80359844 AT>- Pathogenic Coding sequence variant, non coding transcript variant, frameshift variant
rs80359845 GAGA>- Pathogenic Coding sequence variant, non coding transcript variant, frameshift variant
rs80359846 AAAGA>- Pathogenic Coding sequence variant, non coding transcript variant, frameshift variant
rs80359847 AA>-,AAA Pathogenic Coding sequence variant, non coding transcript variant, frameshift variant
rs80359848 ->A Pathogenic Coding sequence variant, non coding transcript variant, frameshift variant
miRNA miRNA information provided by mirtarbase database.
274
miRTarBase ID miRNA Experiments Reference
MIRT022088 hsa-miR-128-3p Sequencing 20371350
MIRT026818 hsa-miR-192-5p Microarray 19074876
MIRT523878 hsa-miR-6894-5p PAR-CLIP 20371350
MIRT523879 hsa-miR-7106-5p PAR-CLIP 20371350
MIRT523877 hsa-miR-149-3p PAR-CLIP 20371350
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
ZNF143 Unknown 20116366
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
32
GO ID Ontology Definition Evidence Reference
GO:0000785 Component Chromatin IBA
GO:0000785 Component Chromatin IDA 19907496
GO:0001741 Component XY body IEA
GO:0002244 Process Hematopoietic progenitor cell differentiation IEA
GO:0004468 Function L-lysine N-acetyltransferase activity, acting on acetyl phosphate as donor IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
609353 27230 ENSG00000171320
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q56NI9
Protein name N-acetyltransferase ESCO2 (EC 2.3.1.-) (Establishment factor-like protein 2) (EFO2) (EFO2p) (hEFO2) (Establishment of cohesion 1 homolog 2) (ECO1 homolog 2)
Protein function Acetyltransferase required for the establishment of sister chromatid cohesion (PubMed:15821733, PubMed:15958495). Couples the processes of cohesion and DNA replication to ensure that only sister chromatids become paired together. In contrast to
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13878 zf-C2H2_3 374 413 zinc-finger of acetyl-transferase ESCO Domain
PF13880 Acetyltransf_13 529 597 ESCO1/2 acetyl-transferase Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed in fetal tissues. In adult, it is expressed in thymus, placenta and small intestine. {ECO:0000269|PubMed:15821733}.
Sequence
MAALTPRKRKQDSLKCDSLLHFTENLFPSPNKKHCFYQNSDKNEENLHCSQQEHFVLSAL
KTTEINRLPSANQGSPFKSALSTVSFYNQNKWYLNPLERKLIKESRSTCLKTNDEDKSFP
IVTEKMQGKPVCSKKNNKKPQKSLTAKYQPKYRHIKPVSRNSRNSKQNRVIYKPIVEKEN
NCHSAENNSNAPRVLSQKIKPQVTLQGGAAFFVRKKSSLRKSSLENEPSLGRTQKSKSEV
IEDSDVETVSEKKTFATRQVPKCLVLEEKLKIGLLSASSKNKEKLIKDSSDDRVSSKEHK
VDKNEAFSSEDSLGENKTISPKSTVYPIFSASSVNSKRSLGEEQFSVGSVNFMKQTNIQK
NTNTRDTSKKTKDQLIIDAGQKHFGATVCKSCGMIYTASNPEDEMQHVQHHHRFLEGIKY
VGWKKERVVAEFWDGKIVLVLPHDPSFAIKKVEDVQELVDNELGFQQVVPKCPNKIKTFL
FISDEKRVVGCLIAEPIKQAFRVLSEPIGPESPSSTECPRAWQCSDVPEPAVCGISRIWV
FRLKRRKRIARRLVDTLRNCFMFGCFLSTDEIAFSDPTPDGKLFATKYCNTPNFLVY
NFN
S
Sequence length 601
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Cell cycle   Establishment of Sister Chromatid Cohesion
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
280
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
ESCO2-related disorder Pathogenic rs80359852, rs80359846 RCV003398414
RCV003407350
Juberg-Hayward syndrome Pathogenic; Likely pathogenic rs991672013, rs1804790650, rs768055962, rs2128951191, rs959080745, rs2128951110, rs80359848, rs80359849, rs80359852, rs1413591962, rs797045566, rs1208433027, rs2486628509, rs1262117826, rs80359859
View all (10 more)
RCV001328531
RCV005051412
RCV005040465
RCV005042571
RCV005042697
RCV005042489
RCV004555894
RCV005041968
RCV005041969
RCV005045260
RCV005049471
RCV005047434
RCV005047716
RCV005047785
RCV005042068
RCV005049382
RCV005042069
RCV002476996
RCV005042070
RCV005042071
RCV005049383
RCV005042072
RCV002482893
RCV005042073
RCV005040048
Roberts-SC phocomelia syndrome Pathogenic; Likely pathogenic rs991672013, rs1804790650, rs1804892169, rs768055962, rs1225195349, rs750842366, rs2128957692, rs2128951191, rs959080745, rs2128951110, rs80359848, rs80359868, rs80359849, rs1554554098, rs80359852
View all (30 more)
RCV005040191
RCV005051412
RCV005624481
RCV005040465
RCV005624483
RCV005624484
RCV005624494
RCV005042571
RCV005042697
RCV005042489
RCV004555894
RCV005624273
RCV005041968
RCV005624275
RCV005041969
RCV005624277
RCV005624278
RCV005624501
RCV005045260
RCV005624343
RCV005049471
RCV005624506
RCV005047434
RCV005624513
RCV005047716
RCV005047785
RCV005624289
RCV005042068
RCV005049382
RCV005624292
RCV005042069
RCV005624296
RCV002476996
RCV005042070
RCV005042071
RCV005049383
RCV005624302
RCV005624303
RCV005624304
RCV005624305
RCV005624306
RCV005624307
RCV002482893
RCV005624309
RCV005624445
RCV005624446
RCV005040048
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Hereditary breast ovarian cancer syndrome Conflicting classifications of pathogenicity rs115144373 RCV001374520
Nonpapillary renal cell carcinoma Uncertain significance rs201354290 RCV005895879
Uterine corpus endometrial carcinoma Likely benign; Benign rs780447242, rs1052492 RCV005925736
RCV005901881
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Breast Neoplasms Associate 19110721, 30947698, 32883354
Carcinoma Renal Cell Stimulate 31944408
Carcinoma Renal Cell Associate 35258173
Carcinoma Squamous Cell Associate 29749538
Cerebrovascular Disorders Associate 37002187
Colorectal Neoplasms Associate 35484177, 37715994
Cysts Associate 37002187
De Lange Syndrome Associate 17273969, 34989322, 35736360
Degloving Injuries Associate 38013320
Diabetes Mellitus Type 1 Associate 36477008