Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
1557
Gene name Gene Name - the full gene name approved by the HGNC.
Cytochrome P450 family 2 subfamily C member 19
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CYP2C19
Synonyms (NCBI Gene) Gene synonyms aliases
CPCJ, CYP2C, CYPIIC17, CYPIIC19, P450C2C, P450IIC19
Chromosome Chromosome number
10
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
10q23.33
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the cytochrome P450 superfamily of enzymes. The cytochrome P450 proteins are monooxygenases which catalyze many reactions involved in drug metabolism and synthesis of cholesterol, steroids and other lipids. This protein local
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs4244285 G>A,C Other, drug-response, likely-benign Coding sequence variant, synonymous variant
rs4986893 G>A Other, drug-response Coding sequence variant, stop gained
rs6413438 C>T Drug-response Coding sequence variant, missense variant
rs7902257 G>A Drug-response Upstream transcript variant
rs12248560 C>A,T Other, drug-response, benign Upstream transcript variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT528537 hsa-miR-10b-3p PAR-CLIP 20371350
MIRT528536 hsa-miR-6780b-3p PAR-CLIP 20371350
MIRT528535 hsa-miR-938 PAR-CLIP 20371350
MIRT528534 hsa-miR-6886-3p PAR-CLIP 20371350
MIRT528533 hsa-miR-145-5p PAR-CLIP 20371350
Transcription factors
Transcription factor Regulation Reference
ESR1 Repression 20675569
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004497 Function Monooxygenase activity IDA 19651758
GO:0005506 Function Iron ion binding IEA
GO:0005737 Component Cytoplasm IBA 21873635
GO:0005789 Component Endoplasmic reticulum membrane TAS
GO:0006082 Process Organic acid metabolic process IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
124020 2621 ENSG00000165841
Protein
UniProt ID P33261
Protein name Cytochrome P450 2C19 (EC 1.14.14.1) ((R)-limonene 6-monooxygenase) (EC 1.14.14.53) ((S)-limonene 6-monooxygenase) (EC 1.14.14.51) ((S)-limonene 7-monooxygenase) (EC 1.14.14.52) (CYPIIC17) (CYPIIC19) (Cytochrome P450-11A) (Cytochrome P450-254C) (Fenbendazo
Protein function A cytochrome P450 monooxygenase involved in the metabolism of polyunsaturated fatty acids (PUFA) (PubMed:18577768, PubMed:19965576, PubMed:20972997). Mechanistically, uses molecular oxygen inserting one oxygen atom into a substrate, and reducing
PDB 4GQS
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00067 p450 30 487 Cytochrome P450 Domain
Sequence
Sequence length 490
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Arachidonic acid metabolism
Linoleic acid metabolism
Drug metabolism - cytochrome P450
Metabolic pathways
Serotonergic synapse
Chemical carcinogenesis - DNA adducts
  Xenobiotics
CYP2E1 reactions
Synthesis of epoxy (EET) and dihydroxyeicosatrienoic acids (DHET)
Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE)
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Atrial fibrillation Atrial Fibrillation rs120074192, rs121908590, rs121908593, rs121434558, rs587776851, rs387906612, rs387906613, rs387906614, rs387906615, rs199472687, rs199472705, rs199473324, rs587777336, rs587777339, rs587777557
View all (6 more)
27356304
Premature ovarian failure Hypergonadotropic Ovarian Failure, X-Linked, Premature Ovarian Failure 1 rs587776535, rs71647804, rs137853320, rs606231206, rs121918655, rs121918656, rs606231207, rs606231208, rs80359775, rs397507719, rs200503569, rs587777267, rs730880018, rs587777268, rs587777269
View all (40 more)
15248218
Prostate cancer Malignant neoplasm of prostate rs121909139, rs121909140, rs121909141, rs121909142, rs121909143, rs606231169, rs606231170, rs137852584, rs137852578, rs137852580, rs137852581, rs137852582 21716162
Unknown
Disease term Disease name Evidence References Source
Mental depression Mental Depression, Depressive disorder, Unipolar Depression, Major Depressive Disorder 21192344, 11412815, 16812949, 21926427, 8835703, 23081704, 17667959, 24014145, 21861666 ClinVar
Paroxysmal atrial fibrillation Paroxysmal atrial fibrillation 27356304 ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Acrocephalosyndactylia Associate 29347970
Acute Coronary Syndrome Associate 22377481, 22742403, 22971905, 23137413, 23257377, 23872648, 23886632, 24581091, 25156215, 26108379, 26147597, 26265611, 26521100, 27323099, 27977637
View all (15 more)
Acute Disease Associate 32759249
Acute Kidney Injury Associate 34730282
Adjustment Disorders Associate 32139218
Adrenal Hyperplasia Congenital Associate 18957504
Adrenocortical Carcinoma Associate 32607875
Alcohol Related Disorders Associate 15447734
Anemia Sickle Cell Associate 27551817
Angina Pectoris Associate 26147597