Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
153562
Gene name Gene Name - the full gene name approved by the HGNC.
MARVEL domain containing 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
MARVELD2
Synonyms (NCBI Gene) Gene synonyms aliases
DFNB49, MARVD2, MRVLDC2, Tric
Disease Acronyms (UniProt) Disease acronyms from UniProt database
DFNB49
Chromosome Chromosome number
5
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
5q13.2
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a membrane protein found at the tight junctions between epithelial cells. The encoded protein helps establish epithelial barriers such as those in the organ of Corti, where these barriers are required for normal hearing
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs61736168 C>T Uncertain-significance, likely-benign, conflicting-interpretations-of-pathogenicity Coding sequence variant, synonymous variant
rs72773422 T>A Uncertain-significance, likely-benign, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs118203957 C>G,T Pathogenic-likely-pathogenic, pathogenic Stop gained, coding sequence variant, missense variant
rs143592561 G>A,C Conflicting-interpretations-of-pathogenicity, uncertain-significance Synonymous variant, coding sequence variant
rs144717803 T>A Conflicting-interpretations-of-pathogenicity, likely-benign Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT314164 hsa-miR-548an PAR-CLIP 21572407
MIRT551307 hsa-miR-5692a PAR-CLIP 21572407
MIRT314162 hsa-miR-3121-3p PAR-CLIP 21572407
MIRT314163 hsa-miR-3714 PAR-CLIP 21572407
MIRT551306 hsa-miR-1179 PAR-CLIP 21572407
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 20164257, 26822058, 28661558, 32296183
GO:0005737 Component Cytoplasm IDA 23073616
GO:0005923 Component Bicellular tight junction IDA 20164257, 23073616
GO:0007605 Process Sensory perception of sound IMP 17186462
GO:0016021 Component Integral component of membrane IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
610572 26401 ENSG00000152939
Protein
UniProt ID Q8N4S9
Protein name MARVEL domain-containing protein 2 (Tricellulin)
Protein function Plays a role in the formation of tricellular tight junctions and of epithelial barriers (By similarity). Required for normal hearing via its role in the separation of the endolymphatic and perilymphatic spaces of the organ of Corti in the inner
PDB 5N7H , 5N7I , 5N7K
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01284 MARVEL 185 361 Membrane-associating domain Domain
PF07303 Occludin_ELL 446 548 Occludin homology domain Domain
Sequence
MSNDGRSRNRDRRYDEVPSDLPYQDTTIRTHPTLHDSERAVSADPLPPPPLPLQPPFGPD
FYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPAS
PARPNHRSPLNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYN
LRYSYMKSWAGLLRILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLG
SMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVAL
FILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISAL
V
CLKLWRHEAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMK
PELLSGHIPPGHIPKPIVMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVL
RKFDELDAVMSRLPHHSESRQEHERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIK
QRIQEYDK
VMNWDVQGYS
Sequence length 558
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  
  Tight junction  
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Deafness DEAFNESS, AUTOSOMAL RECESSIVE 49 rs267607135, rs387906219, rs387906220, rs387906221, rs387906222, rs606231120, rs267606855, rs121918370, rs137853185, rs137853186, rs137853187, rs137853188, rs587776522, rs587776523, rs200781822
View all (1019 more)
25652404, 23979167, 18084694, 17186462
Nonsyndromic deafness Nonsyndromic Deafness rs606231410, rs794729665, rs730880338, rs1566538321 25063198, 18084694, 22903915, 23979167, 17186462, 27344577, 26677943
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma Associate 27641742
Autism Spectrum Disorder Associate 27957319
Carcinoma Hepatocellular Associate 24652413
Carcinoma Non Small Cell Lung Associate 26755624
Cardiomyopathy Hypertrophic Associate 28586052
Classical Lissencephalies and Subcortical Band Heterotopias Associate 25467444
Cockayne Syndrome Associate 29531219
Colitis Ulcerative Inhibit 28612843, 33789594
Colorectal Neoplasms Associate 33000262
Crohn Disease Associate 33105684