Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
153241
Gene name Gene Name - the full gene name approved by the HGNC.
Centrosomal protein 120
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CEP120
Synonyms (NCBI Gene) Gene synonyms aliases
CCDC100, JBTS31, SRTD13
Disease Acronyms (UniProt) Disease acronyms from UniProt database
JBTS31, SRTD13
Chromosome Chromosome number
5
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
5q23.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a protein that functions in the microtubule-dependent coupling of the nucleus and the centrosome. A similar protein in mouse plays a role in both interkinetic nuclear migration, which is a characteristic pattern of nuclear movement in ne
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs114280473 G>A Pathogenic, benign Coding sequence variant, non coding transcript variant, missense variant
rs367600930 C>G Pathogenic Missense variant, coding sequence variant, non coding transcript variant, 5 prime UTR variant
rs757499322 G>A,C Pathogenic Missense variant, 5 prime UTR variant, non coding transcript variant, coding sequence variant, stop gained
rs759125480 G>A Likely-pathogenic Stop gained, non coding transcript variant, coding sequence variant
rs775080726 G>A,C Pathogenic Coding sequence variant, non coding transcript variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT026036 hsa-miR-196a-5p Sequencing 20371350
MIRT032139 hsa-let-7d-5p Sequencing 20371350
MIRT050547 hsa-miR-20a-5p CLASH 23622248
MIRT494306 hsa-miR-548aa PAR-CLIP 23592263
MIRT494305 hsa-miR-548ap-3p PAR-CLIP 23592263
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 26638075
GO:0005737 Component Cytoplasm IEA
GO:0005813 Component Centrosome IBA 21873635
GO:0005813 Component Centrosome IDA 21399614
GO:0005814 Component Centriole IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
613446 26690 ENSG00000168944
Protein
UniProt ID Q8N960
Protein name Centrosomal protein of 120 kDa (Cep120) (Coiled-coil domain-containing protein 100)
Protein function Plays a role in the microtubule-dependent coupling of the nucleus and the centrosome. Involved in the processes that regulate centrosome-mediated interkinetic nuclear migration (INM) of neural progenitors and for proper positioning of neurons du
PDB 4ICW , 4ICX , 6FLJ , 6FLK
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00168 C2 9 114 C2 domain Domain
PF12416 DUF3668 118 340 Cep120 protein Family
PF00168 C2 517 565 C2 domain Domain
Sequence
MVSKSDQLLIVVSILEGRHFPKRPKHMLVVEAKFDGEQLATDPVDHTDQPEFATELAWEI
DRKALHQHRLQRTPIKLQCFALDPVTSAKETIGYIVLDLRTAQETKQAPKWYQL
LSNKYT
KFKSEIQISIALETDTKPPVDSFKAKGAPPRDGKVPAILAGLDPRDIVAVLNEEGGYHQI
GPAEYCTDSFIMSVTIAFATQLEQLIPCTMKLPERQPEFFFYYSLLGNDVTNEPFNDLIN
PNFEPERASVRIRSSVEILRVYLALQSKLQIHLCCGDQSLGSTEIPLTGLLKKGSTEINQ
HPVTVEGAFTLDPPNRAKQKLAPIPVELAPTVGVSVALQR
EGIDSQSLIELKTQNEHEPE
HSKKKVLTPIKEKTLTGPKSPTVSPVPSHNQSPPTKDDATESEVESLQYDKDTKPNPKAS
SSVPASLAQLVTTSNASEVASGQKIAVPATSHHFCFSIDLRSIHALEIGFPINCILRYSY
PFFGSAAPIMTNPPVEVRKNMEVFLPQSYCAFDFATMPHQLQDTFLRIPLLVELWHKDKM
SKDLLLGIARIQLSNILSSEKTRFL
GSNGEQCWRQTYSESVPVIAAQGSNNRIADLSYTV
TLEDYGLVKMREIFISDSSQGVSAVQQKPSSLPPAPCPSEIQTEPRETLEYKAALELEMW
KEMQEDIFENQLKQKELAHMQALAEEWKKRDRERESLVKKKVAEYTILEGKLQKTLIDLE
KREQQLASVESELQREKKELQSERQRNLQELQDSIRRAKEDCIHQVELERLKIKQLEEDK
HRLQQQLNDAENKYKILEKEFQQFKDQQNNKPEIRLQSEINLLTLEKVELERKLESATKS
KLHYKQQWGRALKELARLKQREQESQMARLKKQQEELEQMRLRYLAAEEKDTVKTERQEL
LDIRNELNRLRQQEQKQYQDSTEIASGKKDGPHGSVLEEGLDDYLTRLIEERDTLMRTGV
YNHEDRIISELDRQIREILAKSNASN
Sequence length 986
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Agenesis of corpus callosum Agenesis of corpus callosum rs754914260, rs1057519053, rs1057519056, rs1057519054, rs1057519055, rs1057519057, rs1384496494, rs1599017933
Asphyxiating thoracic dystrophy Saldino-Noonan Syndrome rs137853115, rs137853025, rs1565310938, rs137853028, rs137853029, rs137853030, rs137853031, rs137853032, rs431905499, rs137853033, rs137853034, rs137853035, rs431905500, rs483352907, rs387906980
View all (112 more)
Atrial septal defect Atrial Septal Defects rs137852951, rs137852953, rs137852955, rs267607106, rs104893900, rs104893901, rs104893903, rs606231358, rs606231359, rs137852683, rs606231360, rs104893907, rs104894073, rs1585703301, rs104894074
View all (25 more)
Brachydactyly Brachydactyly rs121908949, rs28937580, rs121909082, rs104894122, rs863223289, rs863223290, rs104894121, rs1587657302, rs863223292, rs74315386, rs74315387, rs28936397, rs753691079, rs121909348, rs121917852
View all (22 more)
Unknown
Disease term Disease name Evidence References Source
Ambiguous genitalia Ambiguous Genitalia ClinVar
Pulmonary hypoplasia Congenital hypoplasia of lung ClinVar
Ptosis Blepharoptosis, Ptosis ClinVar
Renal hypoplasia Congenital hypoplasia of kidney ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Agenesis of Cerebellar Vermis Associate 27208211, 30988386, 33297941, 33486889, 34711653
Agenesis of Corpus Callosum Associate 33270637
Cerebellar Hypoplasia Associate 34711653
Ciliopathies Associate 27208211, 30988386, 33297941, 33486889
Encephalocele Associate 27208211
Fibrosis Associate 37915003
Intervertebral Disc Degeneration Associate 37915003
Jeune syndrome Associate 27208211, 30988386, 33297941
Meckel syndrome type 1 Associate 27208211, 33486889
Multiple Myeloma Associate 35013207