Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
1488
Gene name Gene Name - the full gene name approved by the HGNC.
C-terminal binding protein 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CTBP2
Synonyms (NCBI Gene) Gene synonyms aliases
-
Chromosome Chromosome number
10
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
10q26.13
Summary Summary of gene provided in NCBI Entrez Gene.
This gene produces alternative transcripts encoding two distinct proteins. One protein is a transcriptional repressor, while the other isoform is a major component of specialized synapses known as synaptic ribbons. Both proteins contain a NAD+ binding dom
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT006173 hsa-miR-141-3p Luciferase reporter assay, Western blot 21867514
MIRT006173 hsa-miR-141-3p Luciferase reporter assay, Western blot 21867514
MIRT006173 hsa-miR-141-3p Luciferase reporter assay, Western blot 21867514
MIRT023997 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT051934 hsa-let-7b-5p CLASH 23622248
Transcription factors
Transcription factor Regulation Reference
HIPK2 Unknown 23393140
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II TAS 20705609
GO:0001221 Function Transcription coregulator binding IBA
GO:0001221 Function Transcription coregulator binding IEA
GO:0001222 Function Transcription corepressor binding IPI 29628311
GO:0003713 Function Transcription coactivator activity IBA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602619 2495 ENSG00000175029
Protein
UniProt ID P56545
Protein name C-terminal-binding protein 2 (CtBP2)
Protein function Corepressor targeting diverse transcription regulators. Functions in brown adipose tissue (BAT) differentiation (By similarity). ; Isoform 2 probably acts as a scaffold for specialized synapses.
PDB 2OME , 4LCJ , 6WKW , 8ATI
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00389 2-Hacid_dh 36 358 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Domain
PF02826 2-Hacid_dh_C 139 323 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Domain
Tissue specificity TISSUE SPECIFICITY: Ubiquitous. Highest levels in heart, skeletal muscle, and pancreas.
Sequence
Sequence length 445
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Wnt signaling pathway
Notch signaling pathway
Pathways in cancer
Chronic myeloid leukemia
  Repression of WNT target genes
TCF7L2 mutants don't bind CTBP
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Metabolic Syndrome Metabolic syndrome N/A N/A GWAS
Prostate cancer Prostate cancer, Prostate cancer (late onset) N/A N/A GWAS
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Acute Lung Injury Associate 31754335
Adenocarcinoma of Lung Stimulate 32756072
Adenoma Associate 33972635
Alcoholism Associate 28040410
Anorexia Nervosa Associate 27184124
Arrhythmogenic Right Ventricular Dysplasia Associate 29221435
Breast Neoplasms Associate 23393140, 34074001
Carcinogenesis Associate 30151388
Carcinogenesis Inhibit 34878149
Carcinoma Hepatocellular Stimulate 30151388