Gene Gene information from NCBI Gene database.
Entrez ID 1487
Gene name C-terminal binding protein 1
Gene symbol CTBP1
Synonyms (NCBI Gene)
BARSHADDTS
Chromosome 4
Chromosome location 4p16.3
Summary This gene encodes a protein that binds to the C-terminus of adenovirus E1A proteins. This phosphoprotein is a transcriptional repressor and may play a role during cellular proliferation. This protein and the product of a second closely related gene, CTBP2
miRNA miRNA information provided by mirtarbase database.
254
miRTarBase ID miRNA Experiments Reference
MIRT005605 hsa-miR-137 Luciferase reporter assayqRT-PCRWestern blot 21278922
MIRT005605 hsa-miR-137 Luciferase reporter assayqRT-PCRWestern blot 21278922
MIRT005605 hsa-miR-137 Reporter assay;Other 21278922
MIRT024026 hsa-miR-1-3p Proteomics 18668040
MIRT050145 hsa-miR-26a-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
51
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IMP 19162039, 21102443
GO:0001221 Function Transcription coregulator binding IBA
GO:0001222 Function Transcription corepressor binding IPI 29628311
GO:0003682 Function Chromatin binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602618 2494 ENSG00000159692
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q13363
Protein name C-terminal-binding protein 1 (CtBP1) (EC 1.1.1.-)
Protein function Corepressor targeting diverse transcription regulators such as GLIS2 or BCL6. Has dehydrogenase activity. Involved in controlling the equilibrium between tubular and stacked structures in the Golgi complex. Functions in brown adipose tissue (BAT
PDB 1MX3 , 4LCE , 4U6Q , 4U6S , 6CDF , 6CDR , 6V89 , 6V8A , 7KWM , 8ARI
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00389 2-Hacid_dh 30 352 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Domain
PF02826 2-Hacid_dh_C 133 317 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in germinal center B-cells. {ECO:0000269|PubMed:18212045}.
Sequence
Sequence length 440
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Wnt signaling pathway
Notch signaling pathway
Pathways in cancer
Chronic myeloid leukemia
  Deactivation of the beta-catenin transactivating complex
SUMOylation of transcription cofactors
Repression of WNT target genes
TCF7L2 mutants don't bind CTBP
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
39
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Hypotonia, ataxia, developmental delay, and tooth enamel defect syndrome Pathogenic rs869320802 RCV000595812
Intellectual disability Likely pathogenic rs1731781760 RCV001261374
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
4p partial monosomy syndrome Benign; Likely benign rs1045458 RCV002501769
Cervical cancer Likely benign rs111230970 RCV005903022
Chronic lymphocytic leukemia/small lymphocytic lymphoma Likely benign rs111230970 RCV005903023
CTBP1-related disorder Benign; Likely benign; Uncertain significance rs1045458, rs760425578, rs757736562, rs780391436, rs1289547509, rs147464431, rs746419297, rs111230970, rs375283311, rs369652853, rs553993690 RCV003931066
RCV003973347
RCV003964548
RCV003911895
RCV003956976
RCV003935967
RCV003932877
RCV003923042
RCV003920853
RCV003933154
RCV003978078
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 31059077, 37240137
Alzheimer Disease Associate 40302267
Ataxia Associate 31041561, 36610307
Breast Neoplasms Associate 20964627, 21681822, 30423315, 31534138
Carcinoma Hepatocellular Associate 24440974, 31860631
Carcinoma Non Small Cell Lung Associate 32910558
Carcinoma Pancreatic Ductal Associate 18098271
Cell Transformation Neoplastic Associate 23318885
Cerebral Ventricle Neoplasms Associate 9788966
Colonic Neoplasms Stimulate 20383323