Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
148254
Gene name Gene Name - the full gene name approved by the HGNC.
Zinc finger protein 555
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ZNF555
Synonyms (NCBI Gene) Gene synonyms aliases
-
Chromosome Chromosome number
19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
19p13.3
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT025694 hsa-miR-7-5p Microarray 17612493
MIRT052373 hsa-let-7a-5p CLASH 23622248
MIRT710614 hsa-miR-4724-5p HITS-CLIP 19536157
MIRT710613 hsa-miR-6808-5p HITS-CLIP 19536157
MIRT710612 hsa-miR-6893-5p HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IBA 21873635
GO:0000977 Function RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA 21873635
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA 21873635
GO:0001227 Function DNA-binding transcription repressor activity, RNA polymerase II-specific IBA 21873635
GO:0005515 Function Protein binding IPI 25416956, 31515488
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein
UniProt ID Q8NEP9
Protein name Zinc finger protein 555
Protein function May be involved in transcriptional regulation.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01352 KRAB 3 44 KRAB box Family
PF00096 zf-C2H2 200 222 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 228 250 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 256 278 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 284 306 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 312 334 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 340 362 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 368 390 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 396 418 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 424 446 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 508 530 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 536 558 Zinc finger, C2H2 type Domain
PF13894 zf-C2H2_4 564 587 Domain
Sequence
MDSVVFEDVAVDFTLEEWALLDSAQRDLYRDVMLETFQNLASVDDETQFKASGSVSQQDI
YGEKIPKESKIATFTRNVSWASVLGKIWDSLSIEDQTTNQGRNLSRNHGLERLCESNDQC
GEALSQIPHLNLYKKIPPGVKQYEYNTYGKVFMHRRTSLKSPITVHTGHKPYQCQECGQA
YSCRSHLRMHVRTHNGERPYVCKLCGKTFPRTSSLNRHVRIHTAEKTYECKQCGKAFIDF
SSLTSHLRSH
TGEKPYKCKECGKAFSYSSTFRRHTITHTGEKPYKCKECAEAFSYSSTFR
RHMISH
TGEKPHKCKECGEAFSYSSAFRRHMITHTGEKPYECKQCGKTFIYLQSFRRHER
IH
TGEKPYECKQCGKTFIYPQSFRRHERTHGGEKPYECNQCGKAFSHPSSFRGHMRVHTG
EKPYECKQCGKTFNWPISLRKHMRTHTREKPYECKQCGKAFSLSACFREHVRMHPEDKSY
ECKLCGKAFYCHISLQKHMRRHTAEKLYKCKQCGKAFSWPELLQQHVRTHTVEKPYECKE
CGKVFKWPSSLPIHMRLH
TGEKPYQCKHCGKAFNCSSSLRRHVRIHTTEKQYKCNVGHPP
ANEFMCSASEKSHQERDLIKVVNMVLPL
Sequence length 628
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Generic Transcription Pathway
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Leukemia Leukemia, Myelocytic, Acute rs121909646, rs121913488, rs587776834, rs752746786, rs869312821, rs767454740, rs1554564297 27903959
Associations from Text Mining
Disease Name Relationship Type References
Migraine Disorders Associate 22678113
Muscular Dystrophy Facioscapulohumeral Associate 26184877