ZNF565 (zinc finger protein 565)

Gene

• Entrez ID: 147929
• Gene name: Zinc finger protein 565
• Gene symbol: ZNF565
• Synonyms (NCBI Gene): -
• Chromosome: 19
• Chromosome location: 19q13.12

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT518150	hsa-miR-4438	PAR-CLIP	23446348
MIRT518151	hsa-miR-3190-5p	PAR-CLIP	23446348
MIRT518149	hsa-miR-5095	PAR-CLIP	23446348
MIRT518148	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT518147	hsa-miR-6807-5p	PAR-CLIP	23446348
MIRT518146	hsa-miR-4701-5p	PAR-CLIP	23446348
MIRT518145	hsa-miR-588	PAR-CLIP	23446348
MIRT518150	hsa-miR-4438	PAR-CLIP	23446348
MIRT518151	hsa-miR-3190-5p	PAR-CLIP	23446348
MIRT518149	hsa-miR-5095	PAR-CLIP	23446348
MIRT518148	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT518147	hsa-miR-6807-5p	PAR-CLIP	23446348
MIRT518146	hsa-miR-4701-5p	PAR-CLIP	23446348
MIRT518145	hsa-miR-588	PAR-CLIP	23446348
MIRT1529962	hsa-miR-1272	CLIP-seq
MIRT1529963	hsa-miR-1322	CLIP-seq
MIRT1529964	hsa-miR-3134	CLIP-seq
MIRT1529965	hsa-miR-3660	CLIP-seq
MIRT1529966	hsa-miR-3934	CLIP-seq
MIRT1529967	hsa-miR-4256	CLIP-seq
MIRT1529968	hsa-miR-4526	CLIP-seq
MIRT1529969	hsa-miR-4534	CLIP-seq
MIRT1529970	hsa-miR-4704-5p	CLIP-seq
MIRT1529971	hsa-miR-4762-3p	CLIP-seq
MIRT1529972	hsa-miR-542-3p	CLIP-seq
MIRT1529973	hsa-miR-552	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	21873635
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	21873635
GO:0005634	Component	Nucleus	IBA	21873635
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA	21873635
GO:0046872	Function	Metal ion binding	IEA

Other IDs

• MIM: 614275
• HGNC: 26726
• e!Ensembl: ENSG00000196357

Protein

• UniProt ID: Q8N9K5
• Protein name: Zinc finger protein 565
• Protein function: May be involved in transcriptional regulation.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF01352	KRAB	45 → 86	KRAB box	Family
  PF00096	zf-C2H2	207 → 229	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	235 → 257	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	263 → 285	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	291 → 313	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	319 → 341	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	347 → 369	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	375 → 397	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	403 → 425	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	431 → 453	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	459 → 481	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	487 → 509	Zinc finger, C2H2 type	Domain

• Sequence:

  MRRGPWERWSLASHRLDAGLCTCPREESREIRAGQIVLKAMAQGLVTFRDVAIEFSLEEW
  KCLEPAQRDLYREVTLENFGHLASLGLSISKPDVVSLLEQGKEPWMIANDVTGPWCPDLE
  SRCEKFLQKDIFEIGAFNWEIMESLKCSDLEGSDFRADWECEGQFERQVNEECYFKQVNV
  TYGHMPVFQHHTSHTVRQSRETGEKLMECHECGKAFSRGSHLIQHQKIHTGEKPFGCKEC
  GKAFSRASHLVQHQRIHTGEKPYDCKDCGKAFGRTSELILHQRLHTGVKPYECKECGKTF
  RQHSQLILHQRTHTGEKPYVCKDCGKAFIRGSQLTVHRRIHTGARPYECKECGKAFRQHS
  QLTVHQRIHTGEKPYECKECGKGFIHSSEVTRHQRIHSGEKPYECKECGKAFRQHAQLTR
  HQRVHTGDRPYECKDCGKAFSRSSYLIQHQRIHTGDKPYECKECGKAFIRVSQLTHHQRI
  HTCEKPYECRECGMAFIRSSQLTEHQRIHPGIKPYECRECGQAFILGSQLIEHYRIHTG

• Sequence length: 539

Pathways

Reactome:

Generic Transcription Pathway

Associated diseases

Causal
Disease term	Disease name	dbSNP ID	References
Schizophrenia	Schizophrenia	rs13447324, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346, rs863223347, rs863223351, rs863223352, rs61734270, rs797045205, rs869312829, rs869312830, rs770913157, rs869312832, rs869312831, rs781720548, rs1262969313	21743468

Unknown
Disease term	Disease name	Evidence	References	Source
Alzheimer disease	Alzheimer disease			GWAS