ZNF563 (zinc finger protein 563)

Gene

• Entrez ID: 147837
• Gene name: Zinc finger protein 563
• Gene symbol: ZNF563
• Synonyms (NCBI Gene): -
• Chromosome: 19
• Chromosome location: 19p13.2

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT019200	hsa-miR-335-5p	Microarray	18185580
MIRT531145	hsa-miR-4688	PAR-CLIP	22012620
MIRT531144	hsa-miR-6743-5p	PAR-CLIP	22012620
MIRT531143	hsa-miR-3199	PAR-CLIP	22012620
MIRT531142	hsa-miR-8052	PAR-CLIP	22012620
MIRT531141	hsa-miR-365a-5p	PAR-CLIP	22012620
MIRT531140	hsa-miR-365b-5p	PAR-CLIP	22012620
MIRT531139	hsa-miR-3945	PAR-CLIP	22012620
MIRT531138	hsa-miR-4701-5p	PAR-CLIP	22012620
MIRT518341	hsa-miR-4438	PAR-CLIP	23446348
MIRT518340	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT518339	hsa-miR-6849-3p	PAR-CLIP	23446348
MIRT518338	hsa-miR-619-5p	PAR-CLIP	23446348
MIRT518337	hsa-miR-6506-5p	PAR-CLIP	23446348
MIRT518336	hsa-miR-6889-3p	PAR-CLIP	23446348
MIRT518335	hsa-miR-4252	PAR-CLIP	23446348
MIRT518334	hsa-miR-5095	PAR-CLIP	23446348
MIRT518333	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT518332	hsa-miR-6516-3p	PAR-CLIP	23446348
MIRT518331	hsa-miR-6807-5p	PAR-CLIP	23446348
MIRT518330	hsa-miR-5089-5p	PAR-CLIP	23446348
MIRT531145	hsa-miR-4688	PAR-CLIP	22012620
MIRT531144	hsa-miR-6743-5p	PAR-CLIP	22012620
MIRT531143	hsa-miR-3199	PAR-CLIP	22012620
MIRT531142	hsa-miR-8052	PAR-CLIP	22012620
MIRT531141	hsa-miR-365a-5p	PAR-CLIP	22012620
MIRT531140	hsa-miR-365b-5p	PAR-CLIP	22012620
MIRT531139	hsa-miR-3945	PAR-CLIP	22012620
MIRT531138	hsa-miR-4701-5p	PAR-CLIP	22012620
MIRT518341	hsa-miR-4438	PAR-CLIP	23446348
MIRT518340	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT518339	hsa-miR-6849-3p	PAR-CLIP	23446348
MIRT518338	hsa-miR-619-5p	PAR-CLIP	23446348
MIRT518337	hsa-miR-6506-5p	PAR-CLIP	23446348
MIRT518336	hsa-miR-6889-3p	PAR-CLIP	23446348
MIRT518335	hsa-miR-4252	PAR-CLIP	23446348
MIRT518334	hsa-miR-5095	PAR-CLIP	23446348
MIRT518333	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT518332	hsa-miR-6516-3p	PAR-CLIP	23446348
MIRT518331	hsa-miR-6807-5p	PAR-CLIP	23446348
MIRT518330	hsa-miR-5089-5p	PAR-CLIP	23446348
MIRT1529873	hsa-miR-1182	CLIP-seq
MIRT1529874	hsa-miR-1200	CLIP-seq
MIRT1529875	hsa-miR-1227	CLIP-seq
MIRT1529876	hsa-miR-129-5p	CLIP-seq
MIRT1529877	hsa-miR-1297	CLIP-seq
MIRT1529878	hsa-miR-148a	CLIP-seq
MIRT1529879	hsa-miR-148b	CLIP-seq
MIRT1529880	hsa-miR-149	CLIP-seq
MIRT1529881	hsa-miR-152	CLIP-seq
MIRT1529882	hsa-miR-181a	CLIP-seq
MIRT1529883	hsa-miR-181b	CLIP-seq
MIRT1529884	hsa-miR-181c	CLIP-seq
MIRT1529885	hsa-miR-181d	CLIP-seq
MIRT1529886	hsa-miR-219-1-3p	CLIP-seq
MIRT1529887	hsa-miR-26a	CLIP-seq
MIRT1529888	hsa-miR-26b	CLIP-seq
MIRT1529889	hsa-miR-296-3p	CLIP-seq
MIRT1529890	hsa-miR-3064-5p	CLIP-seq
MIRT1529891	hsa-miR-3194-3p	CLIP-seq
MIRT1529892	hsa-miR-342-5p	CLIP-seq
MIRT1529893	hsa-miR-3672	CLIP-seq
MIRT1529894	hsa-miR-376a	CLIP-seq
MIRT1529895	hsa-miR-376b	CLIP-seq
MIRT1529896	hsa-miR-4262	CLIP-seq
MIRT1529897	hsa-miR-4324	CLIP-seq
MIRT1529898	hsa-miR-4465	CLIP-seq
MIRT1529899	hsa-miR-4505	CLIP-seq
MIRT1529900	hsa-miR-455-5p	CLIP-seq
MIRT1529901	hsa-miR-4651	CLIP-seq
MIRT1529902	hsa-miR-4664-5p	CLIP-seq
MIRT1529903	hsa-miR-4677-3p	CLIP-seq
MIRT1529904	hsa-miR-4679	CLIP-seq
MIRT1529905	hsa-miR-4722-3p	CLIP-seq
MIRT1529906	hsa-miR-4731-5p	CLIP-seq
MIRT1529907	hsa-miR-4781-3p	CLIP-seq
MIRT1529908	hsa-miR-4794	CLIP-seq
MIRT1529909	hsa-miR-4797-5p	CLIP-seq
MIRT1529910	hsa-miR-515-5p	CLIP-seq
MIRT1529911	hsa-miR-544	CLIP-seq
MIRT1529912	hsa-miR-544b	CLIP-seq
MIRT1529913	hsa-miR-571	CLIP-seq
MIRT1529914	hsa-miR-608	CLIP-seq
MIRT1529915	hsa-miR-629	CLIP-seq
MIRT1529916	hsa-miR-760	CLIP-seq
MIRT1529917	hsa-miR-767-3p	CLIP-seq
MIRT1529874	hsa-miR-1200	CLIP-seq
MIRT2160220	hsa-miR-1224-3p	CLIP-seq
MIRT1529875	hsa-miR-1227	CLIP-seq
MIRT2160221	hsa-miR-1260	CLIP-seq
MIRT2160222	hsa-miR-1260b	CLIP-seq
MIRT2160223	hsa-miR-1280	CLIP-seq
MIRT2160224	hsa-miR-1281	CLIP-seq
MIRT1529877	hsa-miR-1297	CLIP-seq
MIRT2160225	hsa-miR-150	CLIP-seq
MIRT2160226	hsa-miR-188-3p	CLIP-seq
MIRT1529887	hsa-miR-26a	CLIP-seq
MIRT1529888	hsa-miR-26b	CLIP-seq
MIRT1529889	hsa-miR-296-3p	CLIP-seq
MIRT2160227	hsa-miR-3156-3p	CLIP-seq
MIRT2160228	hsa-miR-3925-3p	CLIP-seq
MIRT1529897	hsa-miR-4324	CLIP-seq
MIRT1529898	hsa-miR-4465	CLIP-seq
MIRT1529900	hsa-miR-455-5p	CLIP-seq
MIRT1529905	hsa-miR-4722-3p	CLIP-seq
MIRT2160229	hsa-miR-4729	CLIP-seq
MIRT1529912	hsa-miR-544b	CLIP-seq
MIRT2160230	hsa-miR-562	CLIP-seq
MIRT2160231	hsa-miR-766	CLIP-seq
MIRT1529874	hsa-miR-1200	CLIP-seq
MIRT2160220	hsa-miR-1224-3p	CLIP-seq
MIRT2160221	hsa-miR-1260	CLIP-seq
MIRT2160222	hsa-miR-1260b	CLIP-seq
MIRT2160223	hsa-miR-1280	CLIP-seq
MIRT2160224	hsa-miR-1281	CLIP-seq
MIRT1529877	hsa-miR-1297	CLIP-seq
MIRT2160225	hsa-miR-150	CLIP-seq
MIRT1529882	hsa-miR-181a	CLIP-seq
MIRT1529883	hsa-miR-181b	CLIP-seq
MIRT1529884	hsa-miR-181c	CLIP-seq
MIRT1529885	hsa-miR-181d	CLIP-seq
MIRT2379568	hsa-miR-1825	CLIP-seq
MIRT2160226	hsa-miR-188-3p	CLIP-seq
MIRT2379569	hsa-miR-198	CLIP-seq
MIRT2379570	hsa-miR-199a-5p	CLIP-seq
MIRT2379571	hsa-miR-199b-5p	CLIP-seq
MIRT2379572	hsa-miR-24	CLIP-seq
MIRT1529887	hsa-miR-26a	CLIP-seq
MIRT1529888	hsa-miR-26b	CLIP-seq
MIRT1529889	hsa-miR-296-3p	CLIP-seq
MIRT2160227	hsa-miR-3156-3p	CLIP-seq
MIRT2379573	hsa-miR-3174	CLIP-seq
MIRT2379574	hsa-miR-3675-3p	CLIP-seq
MIRT1529894	hsa-miR-376a	CLIP-seq
MIRT1529895	hsa-miR-376b	CLIP-seq
MIRT2160228	hsa-miR-3925-3p	CLIP-seq
MIRT1529896	hsa-miR-4262	CLIP-seq
MIRT2379575	hsa-miR-4284	CLIP-seq
MIRT1529897	hsa-miR-4324	CLIP-seq
MIRT1529898	hsa-miR-4465	CLIP-seq
MIRT2379576	hsa-miR-4652-3p	CLIP-seq
MIRT1529905	hsa-miR-4722-3p	CLIP-seq
MIRT2160229	hsa-miR-4729	CLIP-seq
MIRT2379577	hsa-miR-4796-5p	CLIP-seq
MIRT2379578	hsa-miR-488	CLIP-seq
MIRT1529910	hsa-miR-515-5p	CLIP-seq
MIRT1529912	hsa-miR-544b	CLIP-seq
MIRT2160230	hsa-miR-562	CLIP-seq
MIRT2379579	hsa-miR-617	CLIP-seq
MIRT1529915	hsa-miR-629	CLIP-seq
MIRT2379580	hsa-miR-654-3p	CLIP-seq
MIRT2160231	hsa-miR-766	CLIP-seq
MIRT2160221	hsa-miR-1260	CLIP-seq
MIRT2160222	hsa-miR-1260b	CLIP-seq
MIRT2160224	hsa-miR-1281	CLIP-seq
MIRT1529877	hsa-miR-1297	CLIP-seq
MIRT2160226	hsa-miR-188-3p	CLIP-seq
MIRT1529887	hsa-miR-26a	CLIP-seq
MIRT1529888	hsa-miR-26b	CLIP-seq
MIRT2160227	hsa-miR-3156-3p	CLIP-seq
MIRT1529898	hsa-miR-4465	CLIP-seq
MIRT1529873	hsa-miR-1182	CLIP-seq
MIRT1529880	hsa-miR-149	CLIP-seq
MIRT1529890	hsa-miR-3064-5p	CLIP-seq
MIRT1529892	hsa-miR-342-5p	CLIP-seq
MIRT1529899	hsa-miR-4505	CLIP-seq
MIRT1529901	hsa-miR-4651	CLIP-seq
MIRT1529902	hsa-miR-4664-5p	CLIP-seq
MIRT1529906	hsa-miR-4731-5p	CLIP-seq
MIRT1529908	hsa-miR-4794	CLIP-seq
MIRT1529914	hsa-miR-608	CLIP-seq
MIRT1529916	hsa-miR-760	CLIP-seq
MIRT2160224	hsa-miR-1281	CLIP-seq
MIRT1529877	hsa-miR-1297	CLIP-seq
MIRT1529887	hsa-miR-26a	CLIP-seq
MIRT1529888	hsa-miR-26b	CLIP-seq
MIRT1529898	hsa-miR-4465	CLIP-seq
MIRT2160224	hsa-miR-1281	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000976	Function	Transcription cis-regulatory region binding	IEA
GO:0000977	Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IEA
GO:0003677	Function	DNA binding	IEA
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IEA
GO:0046872	Function	Metal ion binding	IEA

Other IDs

• MIM: HGNC
• HGNC: N/A
• e!Ensembl: HGNC

Protein

• UniProt ID: Q8TA94
• Protein name: Zinc finger protein 563
• Protein function: May be involved in transcriptional regulation.
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF01352	KRAB	3 → 43	KRAB box	Family
  PF00096	zf-C2H2	169 → 190	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	197 → 219	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	225 → 247	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	253 → 275	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	281 → 303	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	309 → 331	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	337 → 359	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	365 → 387	Zinc finger, C2H2 type	Domain
  PF00096	zf-C2H2	421 → 443	Zinc finger, C2H2 type	Domain

• Sequence:

  MDAVAFEDVAVNFTQEEWALLGPSQKNLYRYVMQETIRNLDCIRMIWEEQNTEDQYKNPR
  RNLRCHMVERFSESKDSSQCGETFSLIRDSIVNNSICPGEDPCQSAECEEVIMGHLSLNS
  HIRVDSGHKPHEYQEYGEKPHTHKQRGKAFSYHHSFQSRGRPHTGKKRYECKECGKTFSS
  RRNLRRHMVVQGGNRPYKCKLCGKAFFWPSLLRMHERTHTGEKPYECKQCSKAFPFYSSY
  RRHERMHTGEKPYECKQCSKALPDSSSYIRHERTHTGEKPYTCKQCGKAFSVSSSLRRHE
  TTHSAEKPYECKQCGKTFHHLGSFQIHMKRHTGDRPHKCKICGKGFDRPSLVRYHERIHT
  GEKPYECKQCGKTLSHSSSFRRHMIMHTGGGPHKCKICGKAFVYPSVCQRHEKSHSGEKP
  YECKQCGKALSHSSSFRRHMVMHTGDGPNKCKVCGKAFVYPSVCQRHEKTHWRETI

• Sequence length: 476

Pathways

Reactome:

Generic Transcription Pathway