Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	147837
Gene name Gene Name - the full gene name approved by the HGNC.	Zinc finger protein 563
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	ZNF563
Synonyms (NCBI Gene) Gene synonyms aliases	-
Chromosome Chromosome number	19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	19p13.2

Show/Hide all(178)

miRTarBase ID	miRNA	Experiments	Reference
MIRT019200	hsa-miR-335-5p	Microarray	18185580
MIRT531145	hsa-miR-4688	PAR-CLIP	22012620
MIRT531144	hsa-miR-6743-5p	PAR-CLIP	22012620
MIRT531143	hsa-miR-3199	PAR-CLIP	22012620
MIRT531142	hsa-miR-8052	PAR-CLIP	22012620
MIRT531141	hsa-miR-365a-5p	PAR-CLIP	22012620
MIRT531140	hsa-miR-365b-5p	PAR-CLIP	22012620
MIRT531139	hsa-miR-3945	PAR-CLIP	22012620
MIRT531138	hsa-miR-4701-5p	PAR-CLIP	22012620
MIRT518341	hsa-miR-4438	PAR-CLIP	23446348
MIRT518340	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT518339	hsa-miR-6849-3p	PAR-CLIP	23446348
MIRT518338	hsa-miR-619-5p	PAR-CLIP	23446348
MIRT518337	hsa-miR-6506-5p	PAR-CLIP	23446348
MIRT518336	hsa-miR-6889-3p	PAR-CLIP	23446348
MIRT518335	hsa-miR-4252	PAR-CLIP	23446348
MIRT518334	hsa-miR-5095	PAR-CLIP	23446348
MIRT518333	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT518332	hsa-miR-6516-3p	PAR-CLIP	23446348
MIRT518331	hsa-miR-6807-5p	PAR-CLIP	23446348
MIRT518330	hsa-miR-5089-5p	PAR-CLIP	23446348
MIRT531145	hsa-miR-4688	PAR-CLIP	22012620
MIRT531144	hsa-miR-6743-5p	PAR-CLIP	22012620
MIRT531143	hsa-miR-3199	PAR-CLIP	22012620
MIRT531142	hsa-miR-8052	PAR-CLIP	22012620
MIRT531141	hsa-miR-365a-5p	PAR-CLIP	22012620
MIRT531140	hsa-miR-365b-5p	PAR-CLIP	22012620
MIRT531139	hsa-miR-3945	PAR-CLIP	22012620
MIRT531138	hsa-miR-4701-5p	PAR-CLIP	22012620
MIRT518341	hsa-miR-4438	PAR-CLIP	23446348
MIRT518340	hsa-miR-6504-3p	PAR-CLIP	23446348
MIRT518339	hsa-miR-6849-3p	PAR-CLIP	23446348
MIRT518338	hsa-miR-619-5p	PAR-CLIP	23446348
MIRT518337	hsa-miR-6506-5p	PAR-CLIP	23446348
MIRT518336	hsa-miR-6889-3p	PAR-CLIP	23446348
MIRT518335	hsa-miR-4252	PAR-CLIP	23446348
MIRT518334	hsa-miR-5095	PAR-CLIP	23446348
MIRT518333	hsa-miR-7151-3p	PAR-CLIP	23446348
MIRT518332	hsa-miR-6516-3p	PAR-CLIP	23446348
MIRT518331	hsa-miR-6807-5p	PAR-CLIP	23446348
MIRT518330	hsa-miR-5089-5p	PAR-CLIP	23446348
MIRT1529873	hsa-miR-1182	CLIP-seq
MIRT1529874	hsa-miR-1200	CLIP-seq
MIRT1529875	hsa-miR-1227	CLIP-seq
MIRT1529876	hsa-miR-129-5p	CLIP-seq
MIRT1529877	hsa-miR-1297	CLIP-seq
MIRT1529878	hsa-miR-148a	CLIP-seq
MIRT1529879	hsa-miR-148b	CLIP-seq
MIRT1529880	hsa-miR-149	CLIP-seq
MIRT1529881	hsa-miR-152	CLIP-seq
MIRT1529882	hsa-miR-181a	CLIP-seq
MIRT1529883	hsa-miR-181b	CLIP-seq
MIRT1529884	hsa-miR-181c	CLIP-seq
MIRT1529885	hsa-miR-181d	CLIP-seq
MIRT1529886	hsa-miR-219-1-3p	CLIP-seq
MIRT1529887	hsa-miR-26a	CLIP-seq
MIRT1529888	hsa-miR-26b	CLIP-seq
MIRT1529889	hsa-miR-296-3p	CLIP-seq
MIRT1529890	hsa-miR-3064-5p	CLIP-seq
MIRT1529891	hsa-miR-3194-3p	CLIP-seq
MIRT1529892	hsa-miR-342-5p	CLIP-seq
MIRT1529893	hsa-miR-3672	CLIP-seq
MIRT1529894	hsa-miR-376a	CLIP-seq
MIRT1529895	hsa-miR-376b	CLIP-seq
MIRT1529896	hsa-miR-4262	CLIP-seq
MIRT1529897	hsa-miR-4324	CLIP-seq
MIRT1529898	hsa-miR-4465	CLIP-seq
MIRT1529899	hsa-miR-4505	CLIP-seq
MIRT1529900	hsa-miR-455-5p	CLIP-seq
MIRT1529901	hsa-miR-4651	CLIP-seq
MIRT1529902	hsa-miR-4664-5p	CLIP-seq
MIRT1529903	hsa-miR-4677-3p	CLIP-seq
MIRT1529904	hsa-miR-4679	CLIP-seq
MIRT1529905	hsa-miR-4722-3p	CLIP-seq
MIRT1529906	hsa-miR-4731-5p	CLIP-seq
MIRT1529907	hsa-miR-4781-3p	CLIP-seq
MIRT1529908	hsa-miR-4794	CLIP-seq
MIRT1529909	hsa-miR-4797-5p	CLIP-seq
MIRT1529910	hsa-miR-515-5p	CLIP-seq
MIRT1529911	hsa-miR-544	CLIP-seq
MIRT1529912	hsa-miR-544b	CLIP-seq
MIRT1529913	hsa-miR-571	CLIP-seq
MIRT1529914	hsa-miR-608	CLIP-seq
MIRT1529915	hsa-miR-629	CLIP-seq
MIRT1529916	hsa-miR-760	CLIP-seq
MIRT1529917	hsa-miR-767-3p	CLIP-seq
MIRT1529874	hsa-miR-1200	CLIP-seq
MIRT2160220	hsa-miR-1224-3p	CLIP-seq
MIRT1529875	hsa-miR-1227	CLIP-seq
MIRT2160221	hsa-miR-1260	CLIP-seq
MIRT2160222	hsa-miR-1260b	CLIP-seq
MIRT2160223	hsa-miR-1280	CLIP-seq
MIRT2160224	hsa-miR-1281	CLIP-seq
MIRT1529877	hsa-miR-1297	CLIP-seq
MIRT2160225	hsa-miR-150	CLIP-seq
MIRT2160226	hsa-miR-188-3p	CLIP-seq
MIRT1529887	hsa-miR-26a	CLIP-seq
MIRT1529888	hsa-miR-26b	CLIP-seq
MIRT1529889	hsa-miR-296-3p	CLIP-seq
MIRT2160227	hsa-miR-3156-3p	CLIP-seq
MIRT2160228	hsa-miR-3925-3p	CLIP-seq
MIRT1529897	hsa-miR-4324	CLIP-seq
MIRT1529898	hsa-miR-4465	CLIP-seq
MIRT1529900	hsa-miR-455-5p	CLIP-seq
MIRT1529905	hsa-miR-4722-3p	CLIP-seq
MIRT2160229	hsa-miR-4729	CLIP-seq
MIRT1529912	hsa-miR-544b	CLIP-seq
MIRT2160230	hsa-miR-562	CLIP-seq
MIRT2160231	hsa-miR-766	CLIP-seq
MIRT1529874	hsa-miR-1200	CLIP-seq
MIRT2160220	hsa-miR-1224-3p	CLIP-seq
MIRT2160221	hsa-miR-1260	CLIP-seq
MIRT2160222	hsa-miR-1260b	CLIP-seq
MIRT2160223	hsa-miR-1280	CLIP-seq
MIRT2160224	hsa-miR-1281	CLIP-seq
MIRT1529877	hsa-miR-1297	CLIP-seq
MIRT2160225	hsa-miR-150	CLIP-seq
MIRT1529882	hsa-miR-181a	CLIP-seq
MIRT1529883	hsa-miR-181b	CLIP-seq
MIRT1529884	hsa-miR-181c	CLIP-seq
MIRT1529885	hsa-miR-181d	CLIP-seq
MIRT2379568	hsa-miR-1825	CLIP-seq
MIRT2160226	hsa-miR-188-3p	CLIP-seq
MIRT2379569	hsa-miR-198	CLIP-seq
MIRT2379570	hsa-miR-199a-5p	CLIP-seq
MIRT2379571	hsa-miR-199b-5p	CLIP-seq
MIRT2379572	hsa-miR-24	CLIP-seq
MIRT1529887	hsa-miR-26a	CLIP-seq
MIRT1529888	hsa-miR-26b	CLIP-seq
MIRT1529889	hsa-miR-296-3p	CLIP-seq
MIRT2160227	hsa-miR-3156-3p	CLIP-seq
MIRT2379573	hsa-miR-3174	CLIP-seq
MIRT2379574	hsa-miR-3675-3p	CLIP-seq
MIRT1529894	hsa-miR-376a	CLIP-seq
MIRT1529895	hsa-miR-376b	CLIP-seq
MIRT2160228	hsa-miR-3925-3p	CLIP-seq
MIRT1529896	hsa-miR-4262	CLIP-seq
MIRT2379575	hsa-miR-4284	CLIP-seq
MIRT1529897	hsa-miR-4324	CLIP-seq
MIRT1529898	hsa-miR-4465	CLIP-seq
MIRT2379576	hsa-miR-4652-3p	CLIP-seq
MIRT1529905	hsa-miR-4722-3p	CLIP-seq
MIRT2160229	hsa-miR-4729	CLIP-seq
MIRT2379577	hsa-miR-4796-5p	CLIP-seq
MIRT2379578	hsa-miR-488	CLIP-seq
MIRT1529910	hsa-miR-515-5p	CLIP-seq
MIRT1529912	hsa-miR-544b	CLIP-seq
MIRT2160230	hsa-miR-562	CLIP-seq
MIRT2379579	hsa-miR-617	CLIP-seq
MIRT1529915	hsa-miR-629	CLIP-seq
MIRT2379580	hsa-miR-654-3p	CLIP-seq
MIRT2160231	hsa-miR-766	CLIP-seq
MIRT2160221	hsa-miR-1260	CLIP-seq
MIRT2160222	hsa-miR-1260b	CLIP-seq
MIRT2160224	hsa-miR-1281	CLIP-seq
MIRT1529877	hsa-miR-1297	CLIP-seq
MIRT2160226	hsa-miR-188-3p	CLIP-seq
MIRT1529887	hsa-miR-26a	CLIP-seq
MIRT1529888	hsa-miR-26b	CLIP-seq
MIRT2160227	hsa-miR-3156-3p	CLIP-seq
MIRT1529898	hsa-miR-4465	CLIP-seq
MIRT1529873	hsa-miR-1182	CLIP-seq
MIRT1529880	hsa-miR-149	CLIP-seq
MIRT1529890	hsa-miR-3064-5p	CLIP-seq
MIRT1529892	hsa-miR-342-5p	CLIP-seq
MIRT1529899	hsa-miR-4505	CLIP-seq
MIRT1529901	hsa-miR-4651	CLIP-seq
MIRT1529902	hsa-miR-4664-5p	CLIP-seq
MIRT1529906	hsa-miR-4731-5p	CLIP-seq
MIRT1529908	hsa-miR-4794	CLIP-seq
MIRT1529914	hsa-miR-608	CLIP-seq
MIRT1529916	hsa-miR-760	CLIP-seq
MIRT2160224	hsa-miR-1281	CLIP-seq
MIRT1529877	hsa-miR-1297	CLIP-seq
MIRT1529887	hsa-miR-26a	CLIP-seq
MIRT1529888	hsa-miR-26b	CLIP-seq
MIRT1529898	hsa-miR-4465	CLIP-seq
MIRT2160224	hsa-miR-1281	CLIP-seq

Show/Hide all(13)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000976	Function	Transcription cis-regulatory region binding	IEA
GO:0000977	Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IEA
GO:0003677	Function	DNA binding	IEA
GO:0005515	Function	Protein binding	IPI	32296183
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IEA
GO:0046872	Function	Metal ion binding	IEA

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Protein

UniProt ID

Q8TA94

Protein name

Zinc finger protein 563

Protein function

May be involved in transcriptional regulation.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01352	KRAB	3 → 43	KRAB box	Family
PF00096	zf-C2H2	169 → 190	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	197 → 219	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	225 → 247	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	253 → 275	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	281 → 303	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	309 → 331	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	337 → 359	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	365 → 387	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	421 → 443	Zinc finger, C2H2 type	Domain

Sequence

MDAVAFEDVAVNFTQEEWALLGPSQKNLYRYVMQETIRNLDCIRMIWEEQNTEDQYKNPR
RNLRCHMVERFSESKDSSQCGETFSLIRDSIVNNSICPGEDPCQSAECEEVIMGHLSLNS
HIRVDSGHKPHEYQEYGEKPHTHKQRGKAFSYHHSFQSRGRPHTGKKRYECKECGKTFSS
RRNLRRHMVVQGGNRPYKCKLCGKAFFWPSLLRMHERTHTGEKPYECKQCSKAFPFYSSY
RRHERMHTGEKPYECKQCSKALPDSSSYIRHERTHTGEKPYTCKQCGKAFSVSSSLRRHE
TTHSAEKPYECKQCGKTFHHLGSFQIHMKRHTGDRPHKCKICGKGFDRPSLVRYHERIHT
GEKPYECKQCGKTLSHSSSFRRHMIMHTGGGPHKCKICGKAFVYPSVCQRHEKSHSGEKP
YECKQCGKALSHSSSFRRHMVMHTGDGPNKCKVCGKAFVYPSVCQRHEKTHWRETI

Sequence length

476

Interactions

View interactions

	Reactome
			Generic Transcription Pathway

ZNF563 (zinc finger protein 563)