Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
147837
Gene name Gene Name - the full gene name approved by the HGNC.
Zinc finger protein 563
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ZNF563
Synonyms (NCBI Gene) Gene synonyms aliases
-
Chromosome Chromosome number
19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
19p13.2
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT019200 hsa-miR-335-5p Microarray 18185580
MIRT531145 hsa-miR-4688 PAR-CLIP 22012620
MIRT531144 hsa-miR-6743-5p PAR-CLIP 22012620
MIRT531143 hsa-miR-3199 PAR-CLIP 22012620
MIRT531142 hsa-miR-8052 PAR-CLIP 22012620
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000977 Function RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA 21873635
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA 21873635
GO:0005515 Function Protein binding IPI 32296183
GO:0005634 Component Nucleus IBA 21873635
GO:0006357 Process Regulation of transcription by RNA polymerase II IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein
UniProt ID Q8TA94
Protein name Zinc finger protein 563
Protein function May be involved in transcriptional regulation.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01352 KRAB 3 43 KRAB box Family
PF00096 zf-C2H2 169 190 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 197 219 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 225 247 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 253 275 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 281 303 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 309 331 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 337 359 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 365 387 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 421 443 Zinc finger, C2H2 type Domain
Sequence
MDAVAFEDVAVNFTQEEWALLGPSQKNLYRYVMQETIRNLDCIRMIWEEQNTEDQYKNPR
RNLRCHMVERFSESKDSSQCGETFSLIRDSIVNNSICPGEDPCQSAECEEVIMGHLSLNS
HIRVDSGHKPHEYQEYGEKPHTHKQRGKAFSYHHSFQSRGRPHTGKKRYECKECGKTFSS
RRNLRRHMVV
QGGNRPYKCKLCGKAFFWPSLLRMHERTHTGEKPYECKQCSKAFPFYSSY
RRHERMH
TGEKPYECKQCSKALPDSSSYIRHERTHTGEKPYTCKQCGKAFSVSSSLRRHE
TTH
SAEKPYECKQCGKTFHHLGSFQIHMKRHTGDRPHKCKICGKGFDRPSLVRYHERIHT
GEKPYECKQCGKTLSHSSSFRRHMIMHTGGGPHKCKICGKAFVYPSVCQRHEKSHSGEKP
YECKQCGKALSHSSSFRRHMVMHTGDGPNKCKVCGKAFVYPSVCQRHEKTHWRETI
Sequence length 476
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Generic Transcription Pathway
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Hypercholesterolemia Hypercholesterolemia, Familial rs28942111, rs28942112, rs137852912, rs121908025, rs28942082, rs28942083, rs121908028, rs121908030, rs28942079, rs28942084, rs121908032, rs387906302, rs387906303, rs121908033, rs121908034
View all (1161 more)
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