Gene Gene information from NCBI Gene database.
Entrez ID 144568
Gene name Alpha-2-macroglobulin like 1
Gene symbol A2ML1
Synonyms (NCBI Gene)
CPAMD9OMSp170
Chromosome 12
Chromosome location 12p13.31
Summary This gene encodes a member of the alpha-macroglobulin superfamily. The encoded protein is thought to be an N-glycosylated monomeric protein that acts as an inhibitor of several proteases. It has been shown to form covalent interactions with proteases, and
SNPs SNP information provided by dbSNP.
6
SNP ID Visualize variation Clinical significance Consequence
rs182743597 C>A Conflicting-interpretations-of-pathogenicity Non coding transcript variant, missense variant, coding sequence variant
rs201562272 G>A,T Uncertain-significance, conflicting-interpretations-of-pathogenicity Missense variant, non coding transcript variant, coding sequence variant
rs202067416 G>A,C Likely-benign, uncertain-significance, pathogenic Splice donor variant
rs745711489 ->CA Conflicting-interpretations-of-pathogenicity Coding sequence variant, genic upstream transcript variant, frameshift variant, non coding transcript variant
rs863224951 ->GGCTAAAT Risk-factor, pathogenic Frameshift variant, non coding transcript variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
202
miRTarBase ID miRNA Experiments Reference
MIRT648352 hsa-miR-216a-5p HITS-CLIP 23824327
MIRT628799 hsa-miR-1306-5p HITS-CLIP 23824327
MIRT631834 hsa-miR-6890-3p HITS-CLIP 23824327
MIRT648351 hsa-miR-6736-3p HITS-CLIP 23824327
MIRT680267 hsa-miR-5693 HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
9
GO ID Ontology Definition Evidence Reference
GO:0004866 Function Endopeptidase inhibitor activity IEA
GO:0004867 Function Serine-type endopeptidase inhibitor activity IEA
GO:0005576 Component Extracellular region IEA
GO:0005615 Component Extracellular space IDA 16298998
GO:0005615 Component Extracellular space IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
610627 23336 ENSG00000166535
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
A8K2U0
Protein name Alpha-2-macroglobulin-like protein 1 (C3 and PZP-like alpha-2-macroglobulin domain-containing protein 9)
Protein function Is able to inhibit all four classes of proteinases by a unique 'trapping' mechanism. This protein has a peptide stretch, called the 'bait region' which contains specific cleavage sites for different proteinases. When a proteinase cleaves the bai
PDB 7Q1Y , 7Q5Z , 7Q60 , 7Q61 , 7Q62
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01835 MG2 121 236 MG2 domain Domain
PF17791 MG3 213 304 Macroglobulin domain MG3 Domain
PF17789 MG4 342 439 Macroglobulin domain MG4 Domain
PF07703 A2M_BRD 453 601 Alpha-2-macroglobulin bait region domain Domain
PF00207 A2M 736 826 Alpha-2-macroglobulin family Family
PF07678 TED_complement 946 1251 A-macroglobulin TED domain Domain
PF07677 A2M_recep 1362 1449 A-macroglobulin receptor binding domain Domain
Tissue specificity TISSUE SPECIFICITY: In the epidermis, expressed predominantly in the granular layer at the apical edge of keratinocytes (at protein level). Also detected in placenta, testis and thymus but not in epithelia of kidney, lung, small intestine or colon. {ECO:0
Sequence
MWAQLLLGMLALSPAIAEELPNYLVTLPARLNFPSVQKVCLDLSPGYSDVKFTVTLETKD
KTQKLLEYSGLKKRHLHCISFLVPPPAGGTEEVATIRVSGVGNNISFEEKKKVLIQRQGN
GTFVQTDKPLYTPGQQVYFRIVTMDSNFVPVNDKYSMVELQDPNSNRIAQWLEVVPEQGI
VDLSFQLAPEAMLGTYTVAVAEGKTFGTFSVE
EYVLPKFKVEVVEPKELSTVQESFLVKI
CCRYTYGKPMLGAVQVSVCQKANTYWYREVEREQLPDKCRNLSGQTDKTGCFSAPVDMAT
FDLI
GYAYSHQINIVATVVEEGTGVEANATQNIYISPQMGSMTFEDTSNFYHPNFPFSGK
IRVRGHDDSFLKNHLVFLVIYGTNGTFNQTLVTDNNGLAPFTLETSGWNGTDVSLEGKFQ
MEDLVYNPEQVPRYYQNAY
LHLRPFYSTTRSFLGIHRLNGPLKCGQPQEVLVDYYIDPAD
ASPDQEISFSYYLIGKGSLVMEGQKHLNSKKKGLKASFSLSLTFTSRLAPDPSLVIYAIF
PSGGVVADKIQFSVEMCFDNQVSLGFSPSQQLPGAEVELQLQAAPGSLCALRAVDESVLL
L
RPDRELSNRSVYGMFPFWYGHYPYQVAEYDQCPVSGPWDFPQPLIDPMPQGHSSQRSII
WRPSFSEGTDLFSFFRDVGLKILSNAKIKKPVDCSHRSPEYSTAMGAGGGHPEAFESSTP
LHQAEDSQVRQYFPETWLWDLFPIGNSGKEAVHVTVPDAITEWKAMSFCTSQSRGFGLSP
TVGLTAFKPFFVDLTLPYSVVRGESFRLTATIFNYLKDCIRVQTDL
AKSHEYQLESWADS
QTSSCLCADDAKTHHWNITAVKLGHINFTISTKILDSNEPCGGQKGFVPQKGRSDTLIKP
VLVKPEGVLVEKTHSSLLCPKGKVASESVSLELPVDIVPDSTKAYVTVLGDIMGTALQNL
DGLVQMPSGCGEQNMVLFAPIIYVLQYLEKAGLLTEEIRSRAVGFLEIGYQKELMYKHSN
GSYSAFGERDGNGNTWLTAFVTKCFGQAQKFIFIDPKNIQDALKWMAGNQLPSGCYANVG
NLLHTAMKGGVDDEVSLTAYVTAALLEMGKDVDDPMVSQGLRCLKNSATSTTNLYTQALL
AYIFSLAGEMDIRNILLKQLDQQAIISGESIYWSQKPTPSSNASPWSEPAAVDVELTAYA
LLAQLTKPSLTQKEIAKATSIVAWLAKQHNAYGGFSSTQDTVVALQALAKY
ATTAYMPSE
EINLVVKSTENFQRTFNIQSVNRLVFQQDTLPNVPGMYTLEASGQGCVYVQTVLRYNILP
PTNMKTFSLSVEIGKARCEQPTSPRSLTLTIHTSYVGSRSSSNMAIVEVKMLSGFSPMEG
TNQLLLQQPLVKKVEFGTDTLNIYLDELIKNTQTYTFTISQSVLVTNLKPATIKVYDYYL
PDEQATIQY
SDPCE
Sequence length 1454
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
201
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Otitis media Likely pathogenic rs1409944554 RCV001261808
Otitis media, susceptibility to Likely pathogenic rs1409944554 RCV000768661
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
A2ML1-related disorder Uncertain significance; Likely benign; Conflicting classifications of pathogenicity; Benign rs550751327, rs768785455, rs1482427203, rs774472456, rs768728955, rs753841404, rs185046854, rs747225412, rs1943786459, rs199701571, rs79889829, rs374569843, rs200251270, rs1032646451, rs375784426
View all (67 more)
RCV003918852
RCV003963220
RCV003405583
RCV003963230
RCV003928891
RCV003920937
RCV003938831
RCV003956091
RCV003394116
RCV003935087
RCV003416583
RCV003984144
RCV004749805
RCV003416564
RCV003968593
RCV003893260
RCV003960984
RCV004749904
RCV003418479
RCV003903698
RCV003937655
RCV003907751
RCV003401084
RCV003917857
RCV003977690
RCV003939893
RCV003947798
RCV003939894
RCV003955373
RCV003930003
RCV003930004
RCV003955374
RCV003420590
RCV003947885
RCV003420639
RCV003410726
RCV003397666
RCV003419066
RCV003410607
RCV004750430
RCV003896771
RCV003897094
RCV003964657
RCV003894378
RCV003899357
RCV003909745
RCV003936982
RCV003952274
RCV003942382
RCV003960012
RCV003902667
RCV003972772
RCV003960057
RCV003925340
RCV003932729
RCV003925341
RCV003902666
RCV003902641
RCV003960058
RCV003932708
RCV003925423
RCV003892348
RCV003945465
RCV003917923
RCV003953019
RCV003420289
RCV003955505
RCV003392602
RCV003918358
RCV003938241
RCV003424406
RCV003955625
RCV003908264
RCV003965708
RCV003908209
RCV003895277
RCV003938340
RCV003975445
RCV003898191
RCV003918766
RCV003405441
RCV003918791
RCV004749638
Cervical cancer Benign; Likely benign rs11047493, rs73037002 RCV005899519
RCV005901582
Cholangiocarcinoma Benign rs117033574 RCV005919692
Clear cell carcinoma of kidney Benign; Likely benign rs61741216 RCV005895396
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Borderline Personality Disorder Associate 25612291
Carcinoma Non Small Cell Lung Associate 39413460
Carcinoma Pancreatic Ductal Associate 39413460
Carcinoma Squamous Cell Associate 29749538, 39413460
Cardiofaciocutaneous syndrome Associate 24896146
Cognition Disorders Associate 29084334
Depressive Disorder Major Associate 25612291
Glioblastoma Associate 36766715
Glioma Associate 36766715
Hearing Loss Associate 36719978